RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 BLKP51451 505 aa13.5□□□□□ -0.25
CHD3-211ENST00000481999 PDX1P52945 283 aa13.5□□□□□ -0.25
CHD3-211ENST00000481999 STARD6P59095 220 aa13.5□□□□□ -0.25
CHD3-211ENST00000481999 ZNF45Q02386 682 aa13.5□□□□□ -0.25
CHD3-211ENST00000481999 TGM3Q08188 693 aa13.5□□□□□ -0.25
CHD3-211ENST00000481999 CDC20Q12834 499 aa13.5□□□□□ -0.25
CHD3-211ENST00000481999 EXOSC7Q15024 291 aaKnown RBP13.5□□□□□ -0.25
CHD3-211ENST00000481999 CEBPEQ15744 281 aa13.5□□□□□ -0.25
CHD3-211ENST00000481999 TIMM50Q3ZCQ8 353 aa13.5□□□□□ -0.25
CHD3-211ENST00000481999 ABHD13Q7L211 337 aa13.5□□□□□ -0.25
CHD3-211ENST00000481999 CDS1Q92903 461 aa13.5□□□□□ -0.25
CHD3-211ENST00000481999 SLC35A4Q96G79 324 aa13.5□□□□□ -0.25
CHD3-211ENST00000481999 TGM7Q96PF1 710 aa13.5□□□□□ -0.25
CHD3-211ENST00000481999 CDADC1Q9BWV3 514 aa13.5□□□□□ -0.25
CHD3-211ENST00000481999 OR51E2Q9H255 320 aa13.5□□□□□ -0.25
CHD3-211ENST00000481999 FBXO34Q9NWN3 711 aa13.5□□□□□ -0.25
CHD3-211ENST00000481999 LYARQ9NX58 379 aaKnown RBP13.5□□□□□ -0.25
CHD3-211ENST00000481999 HCN3Q9P1Z3 774 aa13.5□□□□□ -0.25
CHD3-211ENST00000481999 TMCC3Q9ULS5 477 aa13.5□□□□□ -0.25
CHD3-211ENST00000481999 CLCA2Q9UQC9 943 aa13.5□□□□□ -0.25
CHD3-211ENST00000481999 CHST2Q9Y4C5 530 aa13.5□□□□□ -0.25
CHD3-211ENST00000481999 GPC6Q9Y625 555 aaPredicted RBP13.5□□□□□ -0.25
CHD3-211ENST00000481999 CACNA1EQ15878 2313 aa13.5□□□□□ -0.25
CHD3-211ENST00000481999 DSCR3O14972 297 aa13.5□□□□□ -0.25
CHD3-211ENST00000481999 PDGFBP01127 241 aaPredicted RBP13.5□□□□□ -0.25
CHD3-211ENST00000481999 HSMCR30P0CW71 290 aa13.5□□□□□ -0.25
CHD3-211ENST00000481999 MAN2A2P49641 1150 aa13.5□□□□□ -0.25
CHD3-211ENST00000481999 EIF2B2P49770 351 aaKnown RBP13.5□□□□□ -0.25
CHD3-211ENST00000481999 LIMK1P53667 647 aa13.5□□□□□ -0.25
CHD3-211ENST00000481999 PRKCDQ05655 676 aa13.5□□□□□ -0.25
CHD3-211ENST00000481999 PRAMEF17Q5VTA0 474 aa13.5□□□□□ -0.25
CHD3-211ENST00000481999 ZC3H14Q6PJT7 736 aaKnown RBP13.5□□□□□ -0.25
CHD3-211ENST00000481999 OR4K14Q8NGD5 310 aa13.5□□□□□ -0.25
CHD3-211ENST00000481999 SLC38A1Q9H2H9 487 aa13.5□□□□□ -0.25
CHD3-211ENST00000481999 FSCN3Q9NQT6 498 aa13.5□□□□□ -0.25
CHD3-211ENST00000481999 ABCB10Q9NRK6 738 aa13.5□□□□□ -0.25
CHD3-211ENST00000481999 GIMAP4Q9NUV9 329 aa13.5□□□□□ -0.25
CHD3-211ENST00000481999 ENTPD2Q9Y5L3 495 aa13.5□□□□□ -0.25
CHD3-211ENST00000481999 NPIPA5A0A0B4J1W7 369 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 OR5K4A6NMS3 321 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 NPIPA7E9PJI5 369 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 CYR61O00622 381 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 AQP9O43315 295 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 EMC8O43402 210 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 GALR3O60755 368 aaPredicted RBP13.49□□□□□ -0.25
CHD3-211ENST00000481999 PDE9AO76083 593 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 NPIPA8P0DM63 369 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 POU1F1P28069 291 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 PPP2R1BP30154 601 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 CNR2P34972 360 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 KHKP50053 298 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 CRISP3P54108 245 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 PRR5P85299 388 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 ARMC6Q6NXE6 501 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 LYSMD2Q8IV50 215 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 C19orf47Q8N9M1 422 aaKnown RBP13.49□□□□□ -0.25
CHD3-211ENST00000481999 C1orf216Q8TAB5 229 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 SLC7A13Q8TCU3 470 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 PIK3R3Q92569 461 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 ZNF354BQ96LW1 612 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 CHCHD6Q9BRQ6 235 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 ZNF229Q9UJW7 825 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 PEX16Q9Y5Y5 336 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 DSPPQ9NZW4 1301 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 IGHV5-51A0A0C4DH38 117 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 TMEM221A6NGB7 291 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 HRKO00198 91 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 PIPP12273 146 aaPredicted RBP13.49□□□□□ -0.25
CHD3-211ENST00000481999 CPMP14384 443 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 RACK1P63244 317 aaKnown RBP13.49□□□□□ -0.25
CHD3-211ENST00000481999 PLAG1Q6DJT9 500 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 TMEM64Q6YI46 380 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 CACTIN-AS1Q8N1I8 211 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 NECAB3Q96P71 396 aaPredicted RBP13.49□□□□□ -0.25
CHD3-211ENST00000481999 ZNF607Q96SK3 696 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 SLC38A3Q99624 504 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 MGLLQ99685 303 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 CENPOQ9BU64 300 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 UCK2Q9BZX2 261 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 POLE4Q9NR33 117 aa13.49□□□□□ -0.25
CHD3-211ENST00000481999 TMEM184BQ9Y519 407 aaPredicted RBP13.49□□□□□ -0.25
CHD3-211ENST00000481999 PRKNO60260 465 aaPredicted RBP13.48□□□□□ -0.25
CHD3-211ENST00000481999 OXSR1O95747 527 aaPredicted RBP13.48□□□□□ -0.25
CHD3-211ENST00000481999 ELAVL4P26378 380 aaKnown RBP13.48□□□□□ -0.25
CHD3-211ENST00000481999 RFX3P48380 749 aa13.48□□□□□ -0.25
CHD3-211ENST00000481999 UGT2B15P54855 530 aa13.48□□□□□ -0.25
CHD3-211ENST00000481999 ELOCQ15369 112 aa13.48□□□□□ -0.25
CHD3-211ENST00000481999 MED22Q15528 200 aa13.48□□□□□ -0.25
CHD3-211ENST00000481999 DUSP5Q16690 384 aa13.48□□□□□ -0.25
CHD3-211ENST00000481999 C19orf48Q6RUI8 117 aa13.48□□□□□ -0.25
CHD3-211ENST00000481999 CA13Q8N1Q1 262 aa13.48□□□□□ -0.25
CHD3-211ENST00000481999 CLIP4Q8N3C7 705 aa13.48□□□□□ -0.25
CHD3-211ENST00000481999 SEMA6CQ9H3T2 930 aa13.48□□□□□ -0.25
CHD3-211ENST00000481999 WNT16Q9UBV4 365 aa13.48□□□□□ -0.25
CHD3-211ENST00000481999 A4GNTQ9UNA3 340 aa13.48□□□□□ -0.25
CHD3-211ENST00000481999 MGAT4BQ9UQ53 548 aa13.48□□□□□ -0.25
CHD3-211ENST00000481999 MRPS17Q9Y2R5 130 aaKnown RBP13.48□□□□□ -0.25
CHD3-211ENST00000481999 BDP1A6H8Y1 2624 aa13.48□□□□□ -0.25
CHD3-211ENST00000481999 NCOR1O75376 2440 aa13.48□□□□□ -0.25
CHD3-211ENST00000481999 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms