RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 COMMD6Q7Z4G1 85 aa14.42□□□□□ -0.1
DDX56-210ENST00000479440 CCDC91Q7Z6B0 441 aa14.42□□□□□ -0.1
DDX56-210ENST00000479440 CTAGE3PQ8IX95 158 aa14.42□□□□□ -0.1
DDX56-210ENST00000479440 KLHL7Q8IXQ5 586 aa14.42□□□□□ -0.1
DDX56-210ENST00000479440 METTL4Q8N3J2 472 aa14.42□□□□□ -0.1
DDX56-210ENST00000479440 ATP6V1E2Q96A05 226 aa14.42□□□□□ -0.1
DDX56-210ENST00000479440 EFHD2Q96C19 240 aaPredicted RBP14.42□□□□□ -0.1
DDX56-210ENST00000479440 VSTM2LQ96N03 204 aa14.42□□□□□ -0.1
DDX56-210ENST00000479440 FRG2BQ96QU4 278 aa14.42□□□□□ -0.1
DDX56-210ENST00000479440 ALG2Q9H553 416 aa14.42□□□□□ -0.1
DDX56-210ENST00000479440 ESRP2Q9H6T0 727 aaKnown RBP14.42□□□□□ -0.1
DDX56-210ENST00000479440 NGBQ9NPG2 151 aa14.42□□□□□ -0.1
DDX56-210ENST00000479440 PAQR5Q9NXK6 330 aaPredicted RBP14.42□□□□□ -0.1
DDX56-210ENST00000479440 LPAR3Q9UBY5 353 aa14.42□□□□□ -0.1
DDX56-210ENST00000479440 ABCG2Q9UNQ0 655 aa14.42□□□□□ -0.1
DDX56-210ENST00000479440 LIPT1Q9Y234 373 aa14.42□□□□□ -0.1
DDX56-210ENST00000479440 OR10H1Q9Y4A9 318 aa14.42□□□□□ -0.1
DDX56-210ENST00000479440 CR1P17927 2039 aa14.42□□□□□ -0.1
DDX56-210ENST00000479440 HEATR5AQ86XA9 2040 aa14.41□□□□□ -0.1
DDX56-210ENST00000479440 FAM159BA6NKW6 160 aa14.41□□□□□ -0.1
DDX56-210ENST00000479440 C17orf51A8MQB3 221 aa14.41□□□□□ -0.1
DDX56-210ENST00000479440 DLX3O60479 287 aa14.41□□□□□ -0.1
DDX56-210ENST00000479440 IGHV4-39P01824 125 aa14.41□□□□□ -0.1
DDX56-210ENST00000479440 CD3EP07766 207 aa14.41□□□□□ -0.1
DDX56-210ENST00000479440 DANCRP0C864 163 aa14.41□□□□□ -0.1
DDX56-210ENST00000479440 ALDH9A1P49189 494 aa14.41□□□□□ -0.1
DDX56-210ENST00000479440 CCNG1P51959 295 aa14.41□□□□□ -0.1
DDX56-210ENST00000479440 DUSP2Q05923 314 aa14.41□□□□□ -0.1
DDX56-210ENST00000479440 STX5Q13190 355 aa14.41□□□□□ -0.1
DDX56-210ENST00000479440 FAM83EQ2M2I3 478 aa14.41□□□□□ -0.1
DDX56-210ENST00000479440 KRTAP24-1Q3LI83 254 aa14.41□□□□□ -0.1
DDX56-210ENST00000479440 ZNF628Q5EBL2 1059 aa14.41□□□□□ -0.1
DDX56-210ENST00000479440 NPSR1Q6W5P4 371 aa14.41□□□□□ -0.1
DDX56-210ENST00000479440 DNM1P46Q6ZS02 220 aa14.41□□□□□ -0.1
DDX56-210ENST00000479440 STEAP2Q8NFT2 490 aa14.41□□□□□ -0.1
DDX56-210ENST00000479440 OR5M1Q8NGP8 315 aa14.41□□□□□ -0.1
DDX56-210ENST00000479440 RAB3IL1Q8TBN0 382 aa14.41□□□□□ -0.1
DDX56-210ENST00000479440 SMAP2Q8WU79 429 aaPredicted RBP14.41□□□□□ -0.1
DDX56-210ENST00000479440 NXNL1Q96CM4 212 aa14.41□□□□□ -0.1
DDX56-210ENST00000479440 C1GALT1C1Q96EU7 318 aa14.41□□□□□ -0.1
DDX56-210ENST00000479440 CNRIP1Q96F85 164 aaPredicted RBP14.41□□□□□ -0.1
DDX56-210ENST00000479440 CDK15Q96Q40 435 aa14.41□□□□□ -0.1
DDX56-210ENST00000479440 GLRX2Q9NS18 164 aa14.41□□□□□ -0.1
DDX56-210ENST00000479440 TMEM160Q9NX00 188 aa14.41□□□□□ -0.1
DDX56-210ENST00000479440 WHRNQ9P202 907 aa14.41□□□□□ -0.1
DDX56-210ENST00000479440 UTS2RQ9UKP6 389 aa14.41□□□□□ -0.1
DDX56-210ENST00000479440 MCTS1Q9ULC4 181 aaKnown RBP14.41□□□□□ -0.1
DDX56-210ENST00000479440 CLEC4AQ9UMR7 237 aa14.41□□□□□ -0.1
DDX56-210ENST00000479440 USF3Q68DE3 2245 aa14.4□□□□□ -0.1
DDX56-210ENST00000479440 EIF1AYO14602 144 aaKnown RBP14.4□□□□□ -0.1
DDX56-210ENST00000479440 TP73O15350 636 aa14.4□□□□□ -0.1
DDX56-210ENST00000479440 IL11P20809 199 aa14.4□□□□□ -0.1
DDX56-210ENST00000479440 EIF1AXP47813 144 aaKnown RBP14.4□□□□□ -0.1
DDX56-210ENST00000479440 ZNF844Q08AG5 666 aa14.4□□□□□ -0.1
DDX56-210ENST00000479440 FAPQ12884 760 aa14.4□□□□□ -0.1
DDX56-210ENST00000479440 ZNF672Q499Z4 452 aaPredicted RBP14.4□□□□□ -0.1
DDX56-210ENST00000479440 GLYR1Q49A26 553 aaPredicted RBP14.4□□□□□ -0.1
DDX56-210ENST00000479440 ALKBH2Q6NS38 261 aa14.4□□□□□ -0.1
DDX56-210ENST00000479440 KLC3Q6P597 504 aa14.4□□□□□ -0.1
DDX56-210ENST00000479440 CYS1Q717R9 158 aa14.4□□□□□ -0.1
DDX56-210ENST00000479440 SLC44A2Q8IWA5 706 aaPredicted RBP14.4□□□□□ -0.1
DDX56-210ENST00000479440 LRRC8AQ8IWT6 810 aa14.4□□□□□ -0.1
DDX56-210ENST00000479440 SLC35F6Q8N357 371 aa14.4□□□□□ -0.1
DDX56-210ENST00000479440 UHMK1Q8TAS1 419 aaKnown RBP14.4□□□□□ -0.1
DDX56-210ENST00000479440 KCTD4Q8WVF5 259 aa14.4□□□□□ -0.1
DDX56-210ENST00000479440 ZNF681Q96N22 645 aa14.4□□□□□ -0.1
DDX56-210ENST00000479440 RHNO1Q9BSD3 238 aa14.4□□□□□ -0.1
DDX56-210ENST00000479440 NTMT1Q9BV86 223 aa14.4□□□□□ -0.1
DDX56-210ENST00000479440 ELOVL6Q9H5J4 265 aa14.4□□□□□ -0.1
DDX56-210ENST00000479440 NOL11Q9H8H0 719 aaKnown RBP14.4□□□□□ -0.1
DDX56-210ENST00000479440 FOLH1BQ9HBA9 442 aa14.4□□□□□ -0.1
DDX56-210ENST00000479440 MED11Q9P086 117 aa14.4□□□□□ -0.1
DDX56-210ENST00000479440 SENP1Q9P0U3 644 aa14.4□□□□□ -0.1
DDX56-210ENST00000479440 CPSF2Q9P2I0 782 aaKnown RBP14.4□□□□□ -0.1
DDX56-210ENST00000479440 SLC12A4Q9UP95 1085 aa14.4□□□□□ -0.1
DDX56-210ENST00000479440 ANK2Q01484 3957 aa14.4□□□□□ -0.1
DDX56-210ENST00000479440 OR7A17O14581 309 aa14.39□□□□□ -0.11
DDX56-210ENST00000479440 EIF3HO15372 352 aaKnown RBP eCLIP14.39□□□□□ -0.11
DDX56-210ENST00000479440 TUBBP07437 444 aa14.39□□□□□ -0.11
DDX56-210ENST00000479440 TCP1P17987 556 aaKnown RBP14.39□□□□□ -0.11
DDX56-210ENST00000479440 SLC6A8P48029 635 aa14.39□□□□□ -0.11
DDX56-210ENST00000479440 CLK3P49761 638 aaKnown RBP14.39□□□□□ -0.11
DDX56-210ENST00000479440 TRA2BP62995 288 aaKnown RBP14.39□□□□□ -0.11
DDX56-210ENST00000479440 ZNF155Q12901 538 aaPredicted RBP14.39□□□□□ -0.11
DDX56-210ENST00000479440 ACAP2Q15057 778 aa14.39□□□□□ -0.11
DDX56-210ENST00000479440 NRF1Q16656 503 aa14.39□□□□□ -0.11
DDX56-210ENST00000479440 CTU2Q2VPK5 515 aaKnown RBP14.39□□□□□ -0.11
DDX56-210ENST00000479440 NCMAPQ5T1S8 102 aa14.39□□□□□ -0.11
DDX56-210ENST00000479440 FAM180BQ6P0A1 224 aa14.39□□□□□ -0.11
DDX56-210ENST00000479440 GGNQ86UU5 652 aa14.39□□□□□ -0.11
DDX56-210ENST00000479440 SAMD14Q8IZD0 417 aaPredicted RBP14.39□□□□□ -0.11
DDX56-210ENST00000479440 CENPLQ8N0S6 344 aaPredicted RBP14.39□□□□□ -0.11
DDX56-210ENST00000479440 OR52B6Q8NGF0 335 aa14.39□□□□□ -0.11
DDX56-210ENST00000479440 LILRB1Q8NHL6 650 aaPredicted RBP14.39□□□□□ -0.11
DDX56-210ENST00000479440 S100PBPQ96BU1 408 aa14.39□□□□□ -0.11
DDX56-210ENST00000479440 TM4SF18Q96CE8 201 aa14.39□□□□□ -0.11
DDX56-210ENST00000479440 C19orf24Q9BVV8 132 aa14.39□□□□□ -0.11
DDX56-210ENST00000479440 BEX2Q9BXY8 128 aa14.39□□□□□ -0.11
DDX56-210ENST00000479440 FAIMQ9NVQ4 179 aa14.39□□□□□ -0.11
DDX56-210ENST00000479440 TAS2R9Q9NYW1 312 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms