RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 FN3KQ9H479 309 aa19.97■□□□□ 0.79
SDF4-206ENST00000478938 BARX1Q9HBU1 254 aaPredicted RBP19.97■□□□□ 0.79
SDF4-206ENST00000478938 ZNF275Q9NSD4 429 aaPredicted RBP19.97■□□□□ 0.79
SDF4-206ENST00000478938 EXOSC1Q9Y3B2 195 aaKnown RBP19.97■□□□□ 0.79
SDF4-206ENST00000478938 SLC9B1P1A6NJY1 282 aa19.96■□□□□ 0.79
SDF4-206ENST00000478938 S100A8P05109 93 aa19.96■□□□□ 0.79
SDF4-206ENST00000478938 PPIBP23284 216 aaKnown RBP19.96■□□□□ 0.79
SDF4-206ENST00000478938 PTGER3P43115 390 aa19.96■□□□□ 0.79
SDF4-206ENST00000478938 CTSOP43234 321 aaPredicted RBP19.96■□□□□ 0.79
SDF4-206ENST00000478938 MTNR1AP48039 350 aa19.96■□□□□ 0.79
SDF4-206ENST00000478938 CDK6Q00534 326 aa19.96■□□□□ 0.79
SDF4-206ENST00000478938 FAM109BQ6ICB4 259 aaPredicted RBP19.96■□□□□ 0.79
SDF4-206ENST00000478938 FBXO16Q8IX29 292 aaPredicted RBP19.96■□□□□ 0.79
SDF4-206ENST00000478938 SPICQ8N5J4 248 aa19.96■□□□□ 0.79
SDF4-206ENST00000478938 MEIOBQ8N635 442 aa19.96■□□□□ 0.79
SDF4-206ENST00000478938 OR4F15Q8NGB8 312 aa19.96■□□□□ 0.79
SDF4-206ENST00000478938 ELP5Q8TE02 316 aa19.96■□□□□ 0.79
SDF4-206ENST00000478938 WDR77Q9BQA1 342 aaPredicted RBP19.96■□□□□ 0.79
SDF4-206ENST00000478938 CINPQ9BW66 212 aaPredicted RBP19.96■□□□□ 0.79
SDF4-206ENST00000478938 MAP4K5Q9Y4K4 846 aa19.96■□□□□ 0.79
SDF4-206ENST00000478938 MEX3AA1L020 520 aaKnown RBP19.96■□□□□ 0.79
SDF4-206ENST00000478938 POMCP01189 267 aa19.96■□□□□ 0.79
SDF4-206ENST00000478938 PRF1P14222 555 aa19.96■□□□□ 0.79
SDF4-206ENST00000478938 CCDC157Q569K6 752 aa19.96■□□□□ 0.79
SDF4-206ENST00000478938 DCST1Q5T197 706 aa19.96■□□□□ 0.79
SDF4-206ENST00000478938 CPTPQ5TA50 214 aa19.96■□□□□ 0.79
SDF4-206ENST00000478938 FKBP1CQ5VVH2 108 aa19.96■□□□□ 0.79
SDF4-206ENST00000478938 MRPL10Q7Z7H8 261 aaKnown RBP19.96■□□□□ 0.79
SDF4-206ENST00000478938 IZUMO1Q8IYV9 350 aa19.96■□□□□ 0.79
SDF4-206ENST00000478938 TMEM185AQ8NFB2 350 aa19.96■□□□□ 0.79
SDF4-206ENST00000478938 UBTD2Q8WUN7 234 aa19.96■□□□□ 0.79
SDF4-206ENST00000478938 FUBP3Q96I24 572 aaKnown RBP eCLIP19.96■□□□□ 0.79
SDF4-206ENST00000478938 PAWRQ96IZ0 340 aaKnown RBP19.96■□□□□ 0.79
SDF4-206ENST00000478938 OR1F2PQ96R84 312 aa19.96■□□□□ 0.79
SDF4-206ENST00000478938 GSDMCQ9BYG8 508 aa19.96■□□□□ 0.79
SDF4-206ENST00000478938 GHRLQ9UBU3 117 aa19.96■□□□□ 0.79
SDF4-206ENST00000478938 F12P00748 615 aaPredicted RBP19.95■□□□□ 0.78
SDF4-206ENST00000478938 ADCYAP1P18509 176 aa19.95■□□□□ 0.78
SDF4-206ENST00000478938 PRPH2P23942 346 aa19.95■□□□□ 0.78
SDF4-206ENST00000478938 C9orf152Q5JTZ5 239 aa19.95■□□□□ 0.78
SDF4-206ENST00000478938 SLC22A10Q63ZE4 541 aa19.95■□□□□ 0.78
SDF4-206ENST00000478938 SFXN4Q6P4A7 337 aa19.95■□□□□ 0.78
SDF4-206ENST00000478938 KLBQ86Z14 1044 aa19.95■□□□□ 0.78
SDF4-206ENST00000478938 FBXO15Q8NCQ5 510 aaPredicted RBP19.95■□□□□ 0.78
SDF4-206ENST00000478938 KAT2AQ92830 837 aa19.95■□□□□ 0.78
SDF4-206ENST00000478938 BOCQ9BWV1 1114 aa19.95■□□□□ 0.78
SDF4-206ENST00000478938 A0A1B0GUH1 482 aa19.95■□□□□ 0.78
SDF4-206ENST00000478938 SCAMP2O15127 329 aaKnown RBP19.95■□□□□ 0.78
SDF4-206ENST00000478938 LPOP22079 712 aaPredicted RBP19.95■□□□□ 0.78
SDF4-206ENST00000478938 MTNR1BP49286 362 aa19.95■□□□□ 0.78
SDF4-206ENST00000478938 PRR5P85299 388 aa19.95■□□□□ 0.78
SDF4-206ENST00000478938 MLLT1Q03111 559 aaPredicted RBP19.95■□□□□ 0.78
SDF4-206ENST00000478938 SLC25A35Q3KQZ1 300 aa19.95■□□□□ 0.78
SDF4-206ENST00000478938 MINDY4Q4G0A6 757 aa19.95■□□□□ 0.78
SDF4-206ENST00000478938 ACER2Q5QJU3 275 aa19.95■□□□□ 0.78
SDF4-206ENST00000478938 C18orf63Q68DL7 685 aa19.95■□□□□ 0.78
SDF4-206ENST00000478938 MACC1Q6ZN28 852 aa19.95■□□□□ 0.78
SDF4-206ENST00000478938 MEX3DQ86XN8 651 aaKnown RBP19.95■□□□□ 0.78
SDF4-206ENST00000478938 SVBPQ8N300 66 aa19.95■□□□□ 0.78
SDF4-206ENST00000478938 CLDN19Q8N6F1 224 aa19.95■□□□□ 0.78
SDF4-206ENST00000478938 CHST14Q8NCH0 376 aa19.95■□□□□ 0.78
SDF4-206ENST00000478938 OR5AK3PQ8NH89 298 aa19.95■□□□□ 0.78
SDF4-206ENST00000478938 SPRYD4Q8WW59 207 aaPredicted RBP19.95■□□□□ 0.78
SDF4-206ENST00000478938 FGF11Q92914 225 aa19.95■□□□□ 0.78
SDF4-206ENST00000478938 FATE1Q969F0 183 aa19.95■□□□□ 0.78
SDF4-206ENST00000478938 FBXO17Q96EF6 278 aa19.95■□□□□ 0.78
SDF4-206ENST00000478938 SMAD5Q99717 465 aaKnown RBP19.95■□□□□ 0.78
SDF4-206ENST00000478938 FAIM2Q9BWQ8 316 aa19.95■□□□□ 0.78
SDF4-206ENST00000478938 SLC25A32Q9H2D1 315 aa19.95■□□□□ 0.78
SDF4-206ENST00000478938 MBD2Q9UBB5 411 aa19.95■□□□□ 0.78
SDF4-206ENST00000478938 OR10H1Q9Y4A9 318 aa19.95■□□□□ 0.78
SDF4-206ENST00000478938 MTMR11A4FU01 709 aa19.94■□□□□ 0.78
SDF4-206ENST00000478938 POM121BA6NF01 834 aa19.94■□□□□ 0.78
SDF4-206ENST00000478938 EFCAB14O75071 495 aa19.94■□□□□ 0.78
SDF4-206ENST00000478938 NFATC1O95644 943 aa19.94■□□□□ 0.78
SDF4-206ENST00000478938 GAAP10253 952 aa19.94■□□□□ 0.78
SDF4-206ENST00000478938 ZNF3P17036 446 aa19.94■□□□□ 0.78
SDF4-206ENST00000478938 ANXA7P20073 488 aaKnown RBP19.94■□□□□ 0.78
SDF4-206ENST00000478938 MAT1AQ00266 395 aaKnown RBP19.94■□□□□ 0.78
SDF4-206ENST00000478938 DDX39BQ13838 428 aaKnown RBP19.94■□□□□ 0.78
SDF4-206ENST00000478938 DHRS7BQ6IAN0 325 aaPredicted RBP19.94■□□□□ 0.78
SDF4-206ENST00000478938 PRICKLE2Q7Z3G6 844 aa19.94■□□□□ 0.78
SDF4-206ENST00000478938 OR4K1Q8NGD4 311 aa19.94■□□□□ 0.78
SDF4-206ENST00000478938 THAP6Q8TBB0 222 aa19.94■□□□□ 0.78
SDF4-206ENST00000478938 TRMT2BQ96GJ1 504 aaKnown RBP19.94■□□□□ 0.78
SDF4-206ENST00000478938 IFT27Q9BW83 186 aa19.94■□□□□ 0.78
SDF4-206ENST00000478938 ZYG11BQ9C0D3 744 aa19.94■□□□□ 0.78
SDF4-206ENST00000478938 ENKD1Q9H0I2 346 aa19.94■□□□□ 0.78
SDF4-206ENST00000478938 R3HDMLQ9H3Y0 253 aa19.94■□□□□ 0.78
SDF4-206ENST00000478938 AFF4Q9UHB7 1163 aaKnown RBP19.94■□□□□ 0.78
SDF4-206ENST00000478938 FBXW2Q9UKT8 454 aa19.94■□□□□ 0.78
SDF4-206ENST00000478938 WRBO00258 174 aa19.94■□□□□ 0.78
SDF4-206ENST00000478938 PRAF2O60831 178 aa19.94■□□□□ 0.78
SDF4-206ENST00000478938 OR2A4O95047 310 aa19.94■□□□□ 0.78
SDF4-206ENST00000478938 RHOQP17081 205 aa19.94■□□□□ 0.78
SDF4-206ENST00000478938 RGRP47804 291 aa19.94■□□□□ 0.78
SDF4-206ENST00000478938 MMP15P51511 669 aa19.94■□□□□ 0.78
SDF4-206ENST00000478938 ARFIP1P53367 373 aa19.94■□□□□ 0.78
SDF4-206ENST00000478938 UBE2IP63279 158 aaKnown RBP19.94■□□□□ 0.78
SDF4-206ENST00000478938 LSM11P83369 360 aaKnown RBP eCLIP19.94■□□□□ 0.781e-6■■■■■ 29.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms