RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 NECTIN4Q96NY8 510 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 FYTTD1Q96QD9 318 aaKnown RBP10.12□□□□□ -0.79
VPS52-217ENST00000478934 TMED9Q9BVK6 235 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 TMEM106CQ9BVX2 250 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 SRRQ9GZT4 340 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 BCL2L10Q9HD36 194 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 PLEKHB1Q9UF11 243 aaPredicted RBP10.12□□□□□ -0.79
VPS52-217ENST00000478934 ZNF221Q9UK13 617 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 MRPS2Q9Y399 296 aaKnown RBP10.12□□□□□ -0.79
VPS52-217ENST00000478934 CMAHPQ9Y471 501 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 PRR19A6NJB7 356 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 TMCC2O75069 709 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 APODP05090 189 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 ATXN8OSP0DMR3 200 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 PRG2P13727 222 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 TRA2BP62995 288 aaKnown RBP10.11□□□□□ -0.79
VPS52-217ENST00000478934 GPR50Q13585 617 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 C1DQ13901 141 aaKnown RBP10.11□□□□□ -0.79
VPS52-217ENST00000478934 DUSP6Q16828 381 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 TMEM196Q5HYL7 178 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 ENTPD8Q5MY95 495 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 FBXO46Q6PJ61 603 aaPredicted RBP10.11□□□□□ -0.79
VPS52-217ENST00000478934 ENPP7Q6UWV6 458 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 NRMQ8IXM6 262 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 NATD1Q8N6N6 113 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 C7orf57Q8NEG2 295 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 OR52P1PQ8NH57 321 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 UBASH3BQ8TF42 649 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 OR1E3Q8WZA6 343 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 ART5Q96L15 291 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 HDHD5Q9BXW7 423 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 PBX4Q9BYU1 374 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 ENKD1Q9H0I2 346 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 TBC1D17Q9HA65 648 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 GIMAP4Q9NUV9 329 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 ZNF624Q9P2J8 865 aaPredicted RBP10.11□□□□□ -0.79
VPS52-217ENST00000478934 SEC14L4Q9UDX3 406 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 DOCK8Q8NF50 2099 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 LOC105369274A0A096LPK9 316 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 LOC102723532A0A0G2JNH3 316 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 A0A0G2JPF8 293 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 FABP12A6NFH5 140 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 HNRNPCL2B2RXH8 293 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 HNRNPCL3B7ZW38 293 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 CDC42EP2O14613 210 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 EMC8O43402 210 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 IDH3BO43837 385 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 CTSVO60911 334 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 RAB36O95755 333 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 ALPPP05187 535 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 GKN3PP0CG01 181 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 HNRNPCL4P0DMR1 293 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 MPIP34949 423 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 KIR2DL1P43626 348 aaPredicted RBP10.11□□□□□ -0.79
VPS52-217ENST00000478934 ADPRHP54922 357 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 SMIM11AP58511 58 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 STXBP1P61764 594 aaKnown RBP10.11□□□□□ -0.79
VPS52-217ENST00000478934 RPS21P63220 83 aaKnown RBP10.11□□□□□ -0.79
VPS52-217ENST00000478934 FABP5Q01469 135 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 TBRG1Q3YBR2 411 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 TRMT12Q53H54 448 aaKnown RBP10.11□□□□□ -0.79
VPS52-217ENST00000478934 CCDC92Q53HC0 331 aaPredicted RBP10.11□□□□□ -0.79
VPS52-217ENST00000478934 PYDC2Q56P42 97 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 FBXO42Q6P3S6 717 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 PAMR1Q6UXH9 720 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 C16orf62Q7Z3J2 963 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 GALNT12Q8IXK2 581 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 OR4N4Q8N0Y3 316 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 ATP6V1C2Q8NEY4 427 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 DIO2Q92813 273 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 TIMM29Q9BSF4 260 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 C11orf54Q9H0W9 315 aaPredicted RBP10.11□□□□□ -0.79
VPS52-217ENST00000478934 SFXN1Q9H9B4 322 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 CAPN10Q9HC96 672 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 ZSCAN32Q9NX65 697 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 NUFIP1Q9UHK0 495 aaKnown RBP10.11□□□□□ -0.79
VPS52-217ENST00000478934 DIMT1Q9UNQ2 313 aaKnown RBP10.11□□□□□ -0.79
VPS52-217ENST00000478934 CSNK1G3Q9Y6M4 447 aa10.11□□□□□ -0.79
VPS52-217ENST00000478934 A0A075B6Q4 140 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 C2orf92A0A1B0GVN3 265 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 HRO43593 1189 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 EIF2S1P05198 315 aaKnown RBP10.1□□□□□ -0.79
VPS52-217ENST00000478934 CSF3P09919 207 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 LIMS3P0CW19 117 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 LIMS4P0CW20 117 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 PVRP15151 417 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 SDHBP21912 280 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 APEX1P27695 318 aaKnown RBP10.1□□□□□ -0.79
VPS52-217ENST00000478934 OMPP47874 163 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 SMSP52788 366 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 MRPS15P82914 257 aaKnown RBP10.1□□□□□ -0.79
VPS52-217ENST00000478934 MLLT11Q13015 90 aaPredicted RBP10.1□□□□□ -0.79
VPS52-217ENST00000478934 RUNX2Q13950 521 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 P2RY14Q15391 338 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 ZNF791Q3KP31 576 aaPredicted RBP10.1□□□□□ -0.79
VPS52-217ENST00000478934 ZNF425Q6IV72 752 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 AMIGO1Q86WK6 493 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 ANKK1Q8NFD2 765 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 OR10G6Q8NH81 332 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 PHOSPHO2Q8TCD6 241 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms