RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 TMPRSS11BQ86T26 416 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 C9orf40Q8IXQ3 194 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 KLHDC8AQ8IYD2 350 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 LRRC25Q8N386 305 aaPredicted RBP4.17□□□□□ -1.74
CKS1B-207ENST00000477676 NAT8LQ8N9F0 302 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 CLRN3Q8NCR9 226 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 MCUQ8NE86 351 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 TRPV3Q8NET8 790 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 OR10G3Q8NGC4 313 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 NEIL3Q8TAT5 605 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 SLC2A12Q8TD20 617 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 PAQR8Q8TEZ7 354 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 HSPBAP1Q96EW2 488 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 FBXL20Q96IG2 436 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 MAPKAP1Q9BPZ7 522 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 TSGA10Q9BZW7 698 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 OR8D2Q9GZM6 311 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 CCDC68Q9H2F9 335 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 PELI2Q9HAT8 420 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 CLK4Q9HAZ1 481 aaKnown RBP4.17□□□□□ -1.74
CKS1B-207ENST00000477676 C14orf119Q9NWQ9 140 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 ASB6Q9NWX5 421 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 ARL15Q9NXU5 204 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 ZNF490Q9ULM2 529 aaPredicted RBP4.17□□□□□ -1.74
CKS1B-207ENST00000477676 DAPP1Q9UN19 280 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 SLC22A14Q9Y267 594 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 WIF1Q9Y5W5 379 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 CHCHD2Q9Y6H1 151 aaPredicted RBP4.17□□□□□ -1.74
CKS1B-207ENST00000477676 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.17□□□□□ -1.74
CKS1B-207ENST00000477676 ARFGEF3Q5TH69 2177 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 A0A1W2PS29 197 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 TRIM64A6NGJ6 449 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 TRIM64BA6NI03 449 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 CLCA1A8K7I4 914 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 HSPB2A8KAH6 182 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 C17orf105B2RV13 164 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 B4DXG7 233 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 H7C1Q1 480 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 AP3B1O00203 1094 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 PSMD12O00232 456 aaPredicted RBP4.16□□□□□ -1.74
CKS1B-207ENST00000477676 RTCAO00442 366 aaKnown RBP4.16□□□□□ -1.74
CKS1B-207ENST00000477676 PFDN6O15212 129 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 TAPBPO15533 448 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 FGF17O60258 216 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 CTNSO60931 367 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 TRIM3O75382 744 aaPredicted RBP4.16□□□□□ -1.74
CKS1B-207ENST00000477676 PRKRAO75569 313 aaKnown RBP4.16□□□□□ -1.74
CKS1B-207ENST00000477676 WISP3O95389 354 aaPredicted RBP4.16□□□□□ -1.74
CKS1B-207ENST00000477676 ACSL3O95573 720 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 KRT14P02533 472 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 C1QAP02745 245 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 CCDC175P0C221 793 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 C1GALT1C1LP0DN25 315 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 SAT1P21673 171 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 CALRP27797 417 aaKnown RBP4.16□□□□□ -1.74
CKS1B-207ENST00000477676 LOXP28300 417 aaPredicted RBP4.16□□□□□ -1.74
CKS1B-207ENST00000477676 TIMP3P35625 211 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 RGS4P49798 205 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 PLA2G16P53816 162 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 AP1S2P56377 157 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 NKX6-1P78426 367 aaPredicted RBP4.16□□□□□ -1.74
CKS1B-207ENST00000477676 IGLV3-21P80748 117 aaPredicted RBP4.16□□□□□ -1.74
CKS1B-207ENST00000477676 ZNF844Q08AG5 666 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 MALLQ13021 153 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 SLC13A2Q13183 592 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 BMPR2Q13873 1038 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 KEAP1Q14145 624 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 CAPRIN1Q14444 709 aaKnown RBP4.16□□□□□ -1.74
CKS1B-207ENST00000477676 PDCD1Q15116 288 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 HSPB2Q16082 182 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 MPEG1Q2M385 716 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 WLSQ5T9L3 541 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 TEDDM1Q5T9Z0 273 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 ARMC3Q5W041 872 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 C4orf22Q6V702 233 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 TMEM64Q6YI46 380 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 ZNF788Q6ZQV5 615 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 GSTA5Q7RTV2 222 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 CNTN4Q8IWV2 1026 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 OR4N5Q8IXE1 308 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 GPALPP1Q8IXQ4 340 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 ZNF595Q8IYB9 648 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 RNF175Q8N4F7 328 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 RNF10Q8N5U6 811 aaKnown RBP4.16□□□□□ -1.74
CKS1B-207ENST00000477676 MORN4Q8NDC4 146 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 C1orf162Q8NEQ5 155 aaPredicted RBP4.16□□□□□ -1.74
CKS1B-207ENST00000477676 MYRIPQ8NFW9 859 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 OR2L5Q8NG80 312 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 OR8K3Q8NH51 312 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 OR14A16Q8NHC5 309 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 SVIPQ8NHG7 77 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 GOT1L1Q8NHS2 421 aaPredicted RBP4.16□□□□□ -1.74
CKS1B-207ENST00000477676 ANKRD49Q8WVL7 239 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 IGFBPL1Q8WX77 278 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 STON2Q8WXE9 905 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 UCN3Q969E3 161 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 ESAMQ96AP7 390 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 PPWD1Q96BP3 646 aaKnown RBP4.16□□□□□ -1.74
CKS1B-207ENST00000477676 SARAFQ96BY9 339 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 MARS2Q96GW9 593 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms