RNA–Protein interactions for RNA: ENST00000473996.1

PLXNB1-213, Transcript of plexin B1, humanhuman

TSL 2

Gene PLXNB1, Length 1,034 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-213ENST00000473996 EBF4Q9BQW3 602 aa13.8□□□□□ -0.2
PLXNB1-213ENST00000473996 SIKE1Q9BRV8 207 aa13.8□□□□□ -0.2
PLXNB1-213ENST00000473996 YIPF4Q9BSR8 244 aa13.8□□□□□ -0.2
PLXNB1-213ENST00000473996 DEFB127Q9H1M4 99 aa13.8□□□□□ -0.2
PLXNB1-213ENST00000473996 SDR39U1Q9NRG7 319 aaPredicted RBP13.8□□□□□ -0.2
PLXNB1-213ENST00000473996 FAM120CQ9NX05 1096 aaKnown RBP13.8□□□□□ -0.2
PLXNB1-213ENST00000473996 KLRF1Q9NZS2 232 aa13.8□□□□□ -0.2
PLXNB1-213ENST00000473996 BTNL2Q9UIR0 455 aa13.8□□□□□ -0.2
PLXNB1-213ENST00000473996 TRIM3O75382 744 aaPredicted RBP13.79□□□□□ -0.2
PLXNB1-213ENST00000473996 WISP2O76076 250 aa13.79□□□□□ -0.2
PLXNB1-213ENST00000473996 IL33O95760 270 aa13.79□□□□□ -0.2
PLXNB1-213ENST00000473996 PGRP06401 933 aa13.79□□□□□ -0.2
PLXNB1-213ENST00000473996 IL12AP29459 219 aa13.79□□□□□ -0.2
PLXNB1-213ENST00000473996 SOAT1P35610 550 aa13.79□□□□□ -0.2
PLXNB1-213ENST00000473996 MAP3K8P41279 467 aa13.79□□□□□ -0.2
PLXNB1-213ENST00000473996 RFX3P48380 749 aa13.79□□□□□ -0.2
PLXNB1-213ENST00000473996 MASP1P48740 699 aa13.79□□□□□ -0.2
PLXNB1-213ENST00000473996 CLK3P49761 638 aaKnown RBP13.79□□□□□ -0.2
PLXNB1-213ENST00000473996 DGKQP52824 942 aa13.79□□□□□ -0.2
PLXNB1-213ENST00000473996 LASP1Q14847 261 aaKnown RBP13.79□□□□□ -0.2
PLXNB1-213ENST00000473996 SLC10A1Q14973 349 aa13.79□□□□□ -0.2
PLXNB1-213ENST00000473996 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.79□□□□□ -0.2
PLXNB1-213ENST00000473996 BICRALQ6AI39 1079 aa13.79□□□□□ -0.2
PLXNB1-213ENST00000473996 ZNF787Q6DD87 383 aa13.79□□□□□ -0.2
PLXNB1-213ENST00000473996 DESI1Q6ICB0 168 aa13.79□□□□□ -0.2
PLXNB1-213ENST00000473996 C6orf120Q7Z4R8 191 aa13.79□□□□□ -0.2
PLXNB1-213ENST00000473996 FAM109AQ8N4B1 249 aa13.79□□□□□ -0.2
PLXNB1-213ENST00000473996 TMEM251Q8N6I4 163 aa13.79□□□□□ -0.2
PLXNB1-213ENST00000473996 SLC16A11Q8NCK7 471 aa13.79□□□□□ -0.2
PLXNB1-213ENST00000473996 OR52N2Q8NGI0 321 aa13.79□□□□□ -0.2
PLXNB1-213ENST00000473996 ADAMTS15Q8TE58 950 aa13.79□□□□□ -0.2
PLXNB1-213ENST00000473996 PIK3R3Q92569 461 aa13.79□□□□□ -0.2
PLXNB1-213ENST00000473996 JADE3Q92613 823 aa13.79□□□□□ -0.2
PLXNB1-213ENST00000473996 THOC1Q96FV9 657 aaKnown RBP13.79□□□□□ -0.2
PLXNB1-213ENST00000473996 ACTRT3Q9BYD9 372 aa13.79□□□□□ -0.2
PLXNB1-213ENST00000473996 GIN1Q9NXP7 522 aa13.79□□□□□ -0.2
PLXNB1-213ENST00000473996 B4GALT7Q9UBV7 327 aa13.79□□□□□ -0.2
PLXNB1-213ENST00000473996 DCTN4Q9UJW0 460 aa13.79□□□□□ -0.2
PLXNB1-213ENST00000473996 PCDHGB3Q9Y5G1 929 aa13.79□□□□□ -0.2
PLXNB1-213ENST00000473996 GXYLT2A0PJZ3 443 aa13.78□□□□□ -0.2
PLXNB1-213ENST00000473996 PRAMEF25A6NGN4 478 aa13.78□□□□□ -0.2
PLXNB1-213ENST00000473996 C9JVG2 144 aa13.78□□□□□ -0.2
PLXNB1-213ENST00000473996 CDC40O60508 579 aaKnown RBP eCLIP13.78□□□□□ -0.2
PLXNB1-213ENST00000473996 ZG16O60844 167 aa13.78□□□□□ -0.2
PLXNB1-213ENST00000473996 ICOSLGO75144 302 aa13.78□□□□□ -0.2
PLXNB1-213ENST00000473996 PDE9AO76083 593 aa13.78□□□□□ -0.2
PLXNB1-213ENST00000473996 VIMP08670 466 aaKnown RBP13.78□□□□□ -0.2
PLXNB1-213ENST00000473996 ACP2P11117 423 aa13.78□□□□□ -0.2
PLXNB1-213ENST00000473996 CYP4B1P13584 511 aa13.78□□□□□ -0.2
PLXNB1-213ENST00000473996 UQCRC2P22695 453 aa13.78□□□□□ -0.2
PLXNB1-213ENST00000473996 POLR2JP52435 117 aaKnown RBP13.78□□□□□ -0.2
PLXNB1-213ENST00000473996 CASP6P55212 293 aa13.78□□□□□ -0.2
PLXNB1-213ENST00000473996 IRX1P78414 480 aaPredicted RBP13.78□□□□□ -0.2
PLXNB1-213ENST00000473996 GUCY1A3Q02108 690 aa13.78□□□□□ -0.2
PLXNB1-213ENST00000473996 CMPK2Q5EBM0 449 aa13.78□□□□□ -0.2
PLXNB1-213ENST00000473996 CDC73Q6P1J9 531 aa13.78□□□□□ -0.2
PLXNB1-213ENST00000473996 FJX1Q86VR8 437 aa13.78□□□□□ -0.2
PLXNB1-213ENST00000473996 TRIML2Q8N7C3 387 aa13.78□□□□□ -0.2
PLXNB1-213ENST00000473996 COX18Q8N8Q8 333 aa13.78□□□□□ -0.2
PLXNB1-213ENST00000473996 STON2Q8WXE9 905 aa13.78□□□□□ -0.2
PLXNB1-213ENST00000473996 RELTQ969Z4 430 aa13.78□□□□□ -0.2
PLXNB1-213ENST00000473996 RMND5BQ96G75 393 aaPredicted RBP13.78□□□□□ -0.2
PLXNB1-213ENST00000473996 TMEM41AQ96HV5 264 aa13.78□□□□□ -0.2
PLXNB1-213ENST00000473996 ZNF597Q96LX8 424 aa13.78□□□□□ -0.2
PLXNB1-213ENST00000473996 CCDC115Q96NT0 180 aa13.78□□□□□ -0.2
PLXNB1-213ENST00000473996 STACQ99469 402 aa13.78□□□□□ -0.2
PLXNB1-213ENST00000473996 PIGUQ9H490 435 aa13.78□□□□□ -0.2
PLXNB1-213ENST00000473996 NPHS2Q9NP85 383 aa13.78□□□□□ -0.2
PLXNB1-213ENST00000473996 DUSP22Q9NRW4 184 aa13.78□□□□□ -0.2
PLXNB1-213ENST00000473996 GPATCH2Q9NW75 528 aa13.78□□□□□ -0.2
PLXNB1-213ENST00000473996 GTF3C1Q12789 2109 aa13.78□□□□□ -0.2
PLXNB1-213ENST00000473996 A0A0G2JND7 137 aa13.77□□□□□ -0.21
PLXNB1-213ENST00000473996 FAM234BA2RU67 622 aa13.77□□□□□ -0.21
PLXNB1-213ENST00000473996 DUXAA6NLW8 204 aa13.77□□□□□ -0.21
PLXNB1-213ENST00000473996 TROVE2P10155 538 aaKnown RBP eCLIP13.77□□□□□ -0.21
PLXNB1-213ENST00000473996 MATN1P21941 496 aa13.77□□□□□ -0.21
PLXNB1-213ENST00000473996 ELAVL4P26378 380 aaKnown RBP13.77□□□□□ -0.21
PLXNB1-213ENST00000473996 MDH1P40925 334 aaKnown RBP13.77□□□□□ -0.21
PLXNB1-213ENST00000473996 MAGEA5P43359 124 aa13.77□□□□□ -0.21
PLXNB1-213ENST00000473996 MRPL19P49406 292 aaKnown RBP13.77□□□□□ -0.21
PLXNB1-213ENST00000473996 POU6F2P78424 691 aaPredicted RBP13.77□□□□□ -0.21
PLXNB1-213ENST00000473996 DUSP5Q16690 384 aa13.77□□□□□ -0.21
PLXNB1-213ENST00000473996 C1QL3Q5VWW1 255 aa13.77□□□□□ -0.21
PLXNB1-213ENST00000473996 TIGD3Q6B0B8 471 aa13.77□□□□□ -0.21
PLXNB1-213ENST00000473996 SPPL2CQ8IUH8 684 aa13.77□□□□□ -0.21
PLXNB1-213ENST00000473996 OR1J4Q8NGS1 313 aa13.77□□□□□ -0.21
PLXNB1-213ENST00000473996 OR5AK3PQ8NH89 298 aa13.77□□□□□ -0.21
PLXNB1-213ENST00000473996 GOT1L1Q8NHS2 421 aaPredicted RBP13.77□□□□□ -0.21
PLXNB1-213ENST00000473996 RFWD2Q8NHY2 731 aa13.77□□□□□ -0.21
PLXNB1-213ENST00000473996 FBXO30Q8TB52 745 aa13.77□□□□□ -0.21
PLXNB1-213ENST00000473996 FAM110BQ8TC76 370 aa13.77□□□□□ -0.21
PLXNB1-213ENST00000473996 PANX1Q96RD7 426 aa13.77□□□□□ -0.21
PLXNB1-213ENST00000473996 G6PC3Q9BUM1 346 aa13.77□□□□□ -0.21
PLXNB1-213ENST00000473996 BTBD2Q9BX70 525 aa13.77□□□□□ -0.21
PLXNB1-213ENST00000473996 OSBPL11Q9BXB4 747 aa13.77□□□□□ -0.21
PLXNB1-213ENST00000473996 LDAHQ9H6V9 325 aa13.77□□□□□ -0.21
PLXNB1-213ENST00000473996 RMND5AQ9H871 391 aa13.77□□□□□ -0.21
PLXNB1-213ENST00000473996 ZDHHC11Q9H8X9 412 aa13.77□□□□□ -0.21
PLXNB1-213ENST00000473996 SDHAF3Q9NRP4 125 aa13.77□□□□□ -0.21
PLXNB1-213ENST00000473996 QPCTLQ9NXS2 382 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms