RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 ATP4BP51164 291 aa13.99□□□□□ -0.17
SDC3-203ENST00000471567 POLR2JP52435 117 aaKnown RBP13.99□□□□□ -0.17
SDC3-203ENST00000471567 GUCY1A3Q02108 690 aa13.99□□□□□ -0.17
SDC3-203ENST00000471567 SLC10A1Q14973 349 aa13.99□□□□□ -0.17
SDC3-203ENST00000471567 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.99□□□□□ -0.17
SDC3-203ENST00000471567 C6orf120Q7Z4R8 191 aa13.99□□□□□ -0.17
SDC3-203ENST00000471567 COX18Q8N8Q8 333 aa13.99□□□□□ -0.17
SDC3-203ENST00000471567 OR5AK3PQ8NH89 298 aa13.99□□□□□ -0.17
SDC3-203ENST00000471567 ADAMTS15Q8TE58 950 aa13.99□□□□□ -0.17
SDC3-203ENST00000471567 PIK3R3Q92569 461 aa13.99□□□□□ -0.17
SDC3-203ENST00000471567 JADE3Q92613 823 aa13.99□□□□□ -0.17
SDC3-203ENST00000471567 RMND5BQ96G75 393 aaPredicted RBP13.99□□□□□ -0.17
SDC3-203ENST00000471567 JSRP1Q96MG2 331 aaPredicted RBP13.99□□□□□ -0.17
SDC3-203ENST00000471567 YIPF4Q9BSR8 244 aa13.99□□□□□ -0.17
SDC3-203ENST00000471567 BTBD2Q9BX70 525 aa13.99□□□□□ -0.17
SDC3-203ENST00000471567 DEFB127Q9H1M4 99 aa13.99□□□□□ -0.17
SDC3-203ENST00000471567 ZNF703Q9H7S9 590 aaPredicted RBP13.99□□□□□ -0.17
SDC3-203ENST00000471567 NPHS2Q9NP85 383 aa13.99□□□□□ -0.17
SDC3-203ENST00000471567 ABCG2Q9UNQ0 655 aa13.99□□□□□ -0.17
SDC3-203ENST00000471567 OSGIN2Q9Y236 505 aa13.99□□□□□ -0.17
SDC3-203ENST00000471567 ZNF835Q9Y2P0 537 aa13.99□□□□□ -0.17
SDC3-203ENST00000471567 GCN1Q92616 2671 aaKnown RBP13.99□□□□□ -0.17
SDC3-203ENST00000471567 NINQ8N4C6 2090 aa13.99□□□□□ -0.17
SDC3-203ENST00000471567 RNF103-CHMP3A0A140T963 221 aa13.98□□□□□ -0.17
SDC3-203ENST00000471567 CLEC18AA5D8T8 446 aa13.98□□□□□ -0.17
SDC3-203ENST00000471567 DUXAA6NLW8 204 aa13.98□□□□□ -0.17
SDC3-203ENST00000471567 C9JVG2 144 aa13.98□□□□□ -0.17
SDC3-203ENST00000471567 SNPHO15079 494 aa13.98□□□□□ -0.17
SDC3-203ENST00000471567 FADS1O60427 444 aa13.98□□□□□ -0.17
SDC3-203ENST00000471567 KCNK2O95069 426 aa13.98□□□□□ -0.17
SDC3-203ENST00000471567 RFPL3SP0C7P2 107 aa13.98□□□□□ -0.17
SDC3-203ENST00000471567 TROVE2P10155 538 aaKnown RBP eCLIP13.98□□□□□ -0.17
SDC3-203ENST00000471567 MAGEA5P43359 124 aa13.98□□□□□ -0.17
SDC3-203ENST00000471567 MAN2A2P49641 1150 aa13.98□□□□□ -0.17
SDC3-203ENST00000471567 POU6F2P78424 691 aaPredicted RBP13.98□□□□□ -0.17
SDC3-203ENST00000471567 FNDC7Q5VTL7 733 aa13.98□□□□□ -0.17
SDC3-203ENST00000471567 TIGD3Q6B0B8 471 aa13.98□□□□□ -0.17
SDC3-203ENST00000471567 ARHGAP11AQ6P4F7 1023 aa13.98□□□□□ -0.17
SDC3-203ENST00000471567 CLEC18BQ6UXF7 455 aa13.98□□□□□ -0.17
SDC3-203ENST00000471567 SPPL2CQ8IUH8 684 aa13.98□□□□□ -0.17
SDC3-203ENST00000471567 TRIML2Q8N7C3 387 aa13.98□□□□□ -0.17
SDC3-203ENST00000471567 CLEC18CQ8NCF0 446 aa13.98□□□□□ -0.17
SDC3-203ENST00000471567 OR1J4Q8NGS1 313 aa13.98□□□□□ -0.17
SDC3-203ENST00000471567 RFWD2Q8NHY2 731 aa13.98□□□□□ -0.17
SDC3-203ENST00000471567 FBXO30Q8TB52 745 aa13.98□□□□□ -0.17
SDC3-203ENST00000471567 MIPOL1Q8TD10 442 aa13.98□□□□□ -0.17
SDC3-203ENST00000471567 THOC1Q96FV9 657 aaKnown RBP13.98□□□□□ -0.17
SDC3-203ENST00000471567 PANX1Q96RD7 426 aa13.98□□□□□ -0.17
SDC3-203ENST00000471567 G6PC3Q9BUM1 346 aa13.98□□□□□ -0.17
SDC3-203ENST00000471567 RMND5AQ9H871 391 aa13.98□□□□□ -0.17
SDC3-203ENST00000471567 ACKR4Q9NPB9 350 aa13.98□□□□□ -0.17
SDC3-203ENST00000471567 DCTN4Q9UJW0 460 aa13.98□□□□□ -0.17
SDC3-203ENST00000471567 TRIM33Q9UPN9 1127 aa13.98□□□□□ -0.17
SDC3-203ENST00000471567 A0A1B0GVC2 190 aa13.97□□□□□ -0.17
SDC3-203ENST00000471567 CCDC154A6NI56 674 aa13.97□□□□□ -0.17
SDC3-203ENST00000471567 SUSD5O60279 629 aa13.97□□□□□ -0.17
SDC3-203ENST00000471567 CDC40O60508 579 aaKnown RBP eCLIP13.97□□□□□ -0.17
SDC3-203ENST00000471567 HCN1O60741 890 aa13.97□□□□□ -0.17
SDC3-203ENST00000471567 UTS2O95399 124 aa13.97□□□□□ -0.17
SDC3-203ENST00000471567 IGKV1D-16P01601 117 aa13.97□□□□□ -0.17
SDC3-203ENST00000471567 NGFRP08138 427 aa13.97□□□□□ -0.17
SDC3-203ENST00000471567 VIMP08670 466 aaKnown RBP13.97□□□□□ -0.17
SDC3-203ENST00000471567 MATN1P21941 496 aa13.97□□□□□ -0.17
SDC3-203ENST00000471567 EVI2BP34910 448 aa13.97□□□□□ -0.17
SDC3-203ENST00000471567 CLK3P49761 638 aaKnown RBP13.97□□□□□ -0.17
SDC3-203ENST00000471567 GAS1P54826 345 aa13.97□□□□□ -0.17
SDC3-203ENST00000471567 SQLEQ14534 574 aa13.97□□□□□ -0.17
SDC3-203ENST00000471567 METTL21CQ5VZV1 264 aa13.97□□□□□ -0.17
SDC3-203ENST00000471567 SAXO2Q658L1 398 aa13.97□□□□□ -0.17
SDC3-203ENST00000471567 ANGPTL8Q6UXH0 198 aa13.97□□□□□ -0.17
SDC3-203ENST00000471567 Q6ZPB1 254 aaPredicted RBP13.97□□□□□ -0.17
SDC3-203ENST00000471567 TRILQ7L0X0 811 aa13.97□□□□□ -0.17
SDC3-203ENST00000471567 CHERPQ8IWX8 916 aaKnown RBP13.97□□□□□ -0.17
SDC3-203ENST00000471567 FAM26EQ8N5C1 309 aa13.97□□□□□ -0.17
SDC3-203ENST00000471567 OR9I1Q8NGQ6 314 aa13.97□□□□□ -0.17
SDC3-203ENST00000471567 CDS1Q92903 461 aa13.97□□□□□ -0.17
SDC3-203ENST00000471567 NEURL3Q96EH8 262 aa13.97□□□□□ -0.17
SDC3-203ENST00000471567 DTNBP1Q96EV8 351 aa13.97□□□□□ -0.17
SDC3-203ENST00000471567 CHMP6Q96FZ7 201 aa13.97□□□□□ -0.17
SDC3-203ENST00000471567 SLC35G5Q96KT7 338 aa13.97□□□□□ -0.17
SDC3-203ENST00000471567 OR7D2Q96RA2 312 aa13.97□□□□□ -0.17
SDC3-203ENST00000471567 SLC35A5Q9BS91 424 aa13.97□□□□□ -0.17
SDC3-203ENST00000471567 UBQLN3Q9H347 655 aa13.97□□□□□ -0.17
SDC3-203ENST00000471567 RABEP2Q9H5N1 569 aa13.97□□□□□ -0.17
SDC3-203ENST00000471567 HHATLQ9HCP6 504 aa13.97□□□□□ -0.17
SDC3-203ENST00000471567 GALNT9Q9HCQ5 603 aa13.97□□□□□ -0.17
SDC3-203ENST00000471567 SDHAF3Q9NRP4 125 aa13.97□□□□□ -0.17
SDC3-203ENST00000471567 FGFR1OP2Q9NVK5 253 aa13.97□□□□□ -0.17
SDC3-203ENST00000471567 C15orf41Q9Y2V0 281 aa13.97□□□□□ -0.17
SDC3-203ENST00000471567 WIF1Q9Y5W5 379 aa13.97□□□□□ -0.17
SDC3-203ENST00000471567 A0A0G2JND7 137 aa13.96□□□□□ -0.17
SDC3-203ENST00000471567 A0A1B0GTH9 108 aa13.96□□□□□ -0.17
SDC3-203ENST00000471567 A0A1B0GUH1 482 aa13.96□□□□□ -0.17
SDC3-203ENST00000471567 RFXANKO14593 260 aa13.96□□□□□ -0.17
SDC3-203ENST00000471567 GNB5O14775 395 aa13.96□□□□□ -0.17
SDC3-203ENST00000471567 SLC19A2O60779 497 aa13.96□□□□□ -0.17
SDC3-203ENST00000471567 CBR3O75828 277 aa13.96□□□□□ -0.17
SDC3-203ENST00000471567 AGR2O95994 175 aa13.96□□□□□ -0.17
SDC3-203ENST00000471567 AK1P00568 194 aa13.96□□□□□ -0.17
SDC3-203ENST00000471567 ZCCHC18P0CG32 403 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms