RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 PRRX2Q99811 253 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 G6PC3Q9BUM1 346 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 ITPAQ9BY32 194 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 EVA1AQ9H8M9 152 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 SMURF2Q9HAU4 748 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 Q9N2J8 555 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 PNO1Q9NRX1 252 aaKnown RBP8.71□□□□□ -1.02
VPS52-216ENST00000471309 SEMA4GQ9NTN9 838 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 PDP1Q9P0J1 537 aaPredicted RBP8.71□□□□□ -1.02
VPS52-216ENST00000471309 TMEFF2Q9UIK5 374 aaPredicted RBP8.71□□□□□ -1.02
VPS52-216ENST00000471309 SLC13A4Q9UKG4 626 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 MKLN1Q9UL63 735 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 MKL2Q9ULH7 1088 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 DTX4Q9Y2E6 619 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 CHST2Q9Y4C5 530 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 ORC6Q9Y5N6 252 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 CLCA3PQ9Y6N3 262 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 DNAH14Q0VDD8 3507 aa8.71□□□□□ -1.02
VPS52-216ENST00000471309 GOLGA4Q13439 2230 aaKnown RBP8.7□□□□□ -1.02
VPS52-216ENST00000471309 UNC13CQ8NB66 2214 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 GXYLT2A0PJZ3 443 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 MAGEA13PA6NCF6 341 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 VSTM2BA6NLU5 285 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 TMX2-CTNND1H3BSU7 103 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 J3KTA2 159 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 M0R3H8 397 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 FFAR1O14842 300 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 HS6ST1O60243 411 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 SEMA7AO75326 666 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 UGT2B17O75795 530 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 GADD45GO95257 159 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 ZGLP1P0C6A0 271 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 CT45A8P0DMV1 189 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 CT45A9P0DMV2 189 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 ITGAMP11215 1152 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 NID1P14543 1247 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 CDH2P19022 906 aaPredicted RBP8.7□□□□□ -1.02
VPS52-216ENST00000471309 AGXTP21549 392 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 MYF6P23409 242 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 PIGAP37287 484 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 YAP1P46937 504 aaKnown RBP8.7□□□□□ -1.02
VPS52-216ENST00000471309 CHN2P52757 468 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 SLC37A1P57057 533 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 SMIM11AP58511 58 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 EEF1A1P68104 462 aaKnown RBP8.7□□□□□ -1.02
VPS52-216ENST00000471309 SPEM2Q0P670 501 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 LAPTM4AQ15012 233 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 GPR68Q15743 365 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 NPTX1Q15818 432 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.7□□□□□ -1.02
VPS52-216ENST00000471309 MICAQ29983 383 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 EXOC3L2Q2M3D2 409 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 CT45A2Q5DJT8 189 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 CDCP2Q5VXM1 449 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 MRPL14Q6P1L8 145 aaKnown RBP8.7□□□□□ -1.02
VPS52-216ENST00000471309 FIGNL1Q6PIW4 674 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 USP51Q70EK9 711 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 HMGN2P46Q86SG4 172 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 LAPTM4BQ86VI4 370 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 RBM45Q8IUH3 476 aaKnown RBP8.7□□□□□ -1.02
VPS52-216ENST00000471309 LACC1Q8IV20 430 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 OFCC1Q8IZS5 231 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 MORN4Q8NDC4 146 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 PIK3C3Q8NEB9 887 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 OR10G2Q8NGC3 310 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 OR6T1Q8NGN1 323 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 ZNF721Q8TF20 911 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 GIPC3Q8TF64 312 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 PHF10Q8WUB8 498 aaKnown RBP8.7□□□□□ -1.02
VPS52-216ENST00000471309 OIT3Q8WWZ8 545 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 ZG16BQ96DA0 208 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 SENP5Q96HI0 755 aaPredicted RBP8.7□□□□□ -1.02
VPS52-216ENST00000471309 CMKLR1Q99788 373 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 CTRCQ99895 268 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 STRADBQ9C0K7 418 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 TOR3AQ9H497 397 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 WDR54Q9H977 334 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 ACER3Q9NUN7 267 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 UBAP1Q9NZ09 502 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 AKAP7Q9P0M2 348 aaPredicted RBP8.7□□□□□ -1.02
VPS52-216ENST00000471309 KIF17Q9P2E2 1029 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 NXT1Q9UKK6 140 aaKnown RBP8.7□□□□□ -1.02
VPS52-216ENST00000471309 A4GNTQ9UNA3 340 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 ZNF232Q9UNY5 417 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 GPR55Q9Y2T6 319 aaPredicted RBP8.7□□□□□ -1.02
VPS52-216ENST00000471309 PCDHGA10Q9Y5H3 936 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 ZNF318Q5VUA4 2279 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 SCN2AQ99250 2005 aa8.7□□□□□ -1.02
VPS52-216ENST00000471309 CENPVL1A0A0U1RR11 272 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 A0A1W2PRQ8 180 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 CDHR4A6H8M9 788 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 FRG2CA6NGY1 282 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 OR6C76A6NM76 312 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 IDSB3KWA1 339 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 AGRPO00253 132 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 MEN1O00255 615 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 FAAHO00519 579 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 PEX12O00623 359 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 CCNB2O95067 398 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 OXSR1O95747 527 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms