RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 TMCO6Q96DC7 493 aa5.63□□□□□ -1.51
SHQ1-205ENST00000468371 PEX11GQ96HA9 241 aa5.63□□□□□ -1.51
SHQ1-205ENST00000468371 GPR78Q96P69 363 aa5.63□□□□□ -1.51
SHQ1-205ENST00000468371 SLC30A2Q9BRI3 323 aa5.63□□□□□ -1.51
SHQ1-205ENST00000468371 EFCAB11Q9BUY7 163 aa5.63□□□□□ -1.51
SHQ1-205ENST00000468371 POLR2J2Q9GZM3 115 aaKnown RBP5.63□□□□□ -1.51
SHQ1-205ENST00000468371 MMP27Q9H306 513 aa5.63□□□□□ -1.51
SHQ1-205ENST00000468371 FARSBQ9NSD9 589 aaKnown RBP5.63□□□□□ -1.51
SHQ1-205ENST00000468371 C14orf105Q9NVL8 296 aa5.63□□□□□ -1.51
SHQ1-205ENST00000468371 TAS2R9Q9NYW1 312 aa5.63□□□□□ -1.51
SHQ1-205ENST00000468371 TCFL5Q9UL49 500 aa5.63□□□□□ -1.51
SHQ1-205ENST00000468371 SLC22A14Q9Y267 594 aa5.63□□□□□ -1.51
SHQ1-205ENST00000468371 HSPB11Q9Y547 144 aa5.63□□□□□ -1.51
SHQ1-205ENST00000468371 GPR45Q9Y5Y3 372 aa5.63□□□□□ -1.51
SHQ1-205ENST00000468371 ARHGEF17Q96PE2 2063 aaPredicted RBP5.62□□□□□ -1.51
SHQ1-205ENST00000468371 TARM1B6A8C7 271 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 K7ENP7 123 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 M0QX08 132 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 SAP18O00422 153 aaKnown RBP5.62□□□□□ -1.51
SHQ1-205ENST00000468371 SLC16A5O15375 505 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 NOS1APO75052 506 aaPredicted RBP5.62□□□□□ -1.51
SHQ1-205ENST00000468371 SOX14O95416 240 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 GBAP04062 536 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 ITGB2P05107 769 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 ATF4P18848 351 aaPredicted RBP5.62□□□□□ -1.51
SHQ1-205ENST00000468371 GGT1P19440 569 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 CSF2RBP32927 897 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 FEN1P39748 380 aaKnown RBP5.62□□□□□ -1.51
SHQ1-205ENST00000468371 XCR1P46094 333 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 TBPL1P62380 186 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 CLN3Q13286 438 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 SLBPQ14493 270 aaKnown RBP eCLIP5.62□□□□□ -1.51
SHQ1-205ENST00000468371 ADPRMQ3LIE5 342 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 TOR1AIP1Q5JTV8 583 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 KCTD11Q693B1 232 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 LETMD1Q6P1Q0 360 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 INO80CQ6PI98 192 aaPredicted RBP5.62□□□□□ -1.51
SHQ1-205ENST00000468371 CYP4Z1Q86W10 505 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 THOC6Q86W42 341 aaKnown RBP5.62□□□□□ -1.51
SHQ1-205ENST00000468371 LGI4Q8N135 537 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 OR1N1Q8NGS0 311 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 OR5AK3PQ8NH89 298 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 ZNF675Q8TD23 568 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 PIK3R3Q92569 461 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 MAELQ96JY0 434 aaKnown RBP5.62□□□□□ -1.51
SHQ1-205ENST00000468371 BBS4Q96RK4 519 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 PKP4Q99569 1192 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 DERL2Q9GZP9 239 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 OR51E2Q9H255 320 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 OR52A5Q9H2C5 316 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 MKKSQ9NPJ1 570 aaPredicted RBP5.62□□□□□ -1.51
SHQ1-205ENST00000468371 ZNF224Q9NZL3 707 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 UTS2RQ9UKP6 389 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 GSTK1Q9Y2Q3 226 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 FLNBO75369 2602 aaKnown RBP5.62□□□□□ -1.51
SHQ1-205ENST00000468371 NUP214P35658 2090 aaPredicted RBP5.62□□□□□ -1.51
SHQ1-205ENST00000468371 PTPRDP23468 1912 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 C9orf172C9J069 976 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 ACOT7O00154 380 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 EIF3FO00303 357 aaPredicted RBP5.62□□□□□ -1.51
SHQ1-205ENST00000468371 ERN1O75460 977 aaKnown RBP5.62□□□□□ -1.51
SHQ1-205ENST00000468371 ERAL1O75616 437 aaKnown RBP5.62□□□□□ -1.51
SHQ1-205ENST00000468371 UPK1BO75841 260 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 DXOO77932 396 aaKnown RBP5.62□□□□□ -1.51
SHQ1-205ENST00000468371 FPR1P21462 350 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 AIMP2Q13155 320 aaKnown RBP5.62□□□□□ -1.51
SHQ1-205ENST00000468371 RCAN2Q14206 197 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 PRAMEF17Q5VTA0 474 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 GARNL3Q5VVW2 1013 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 CDCP2Q5VXM1 449 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 PLEKHM3Q6ZWE6 761 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 ELMOD2Q8IZ81 293 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 OR8H3Q8N146 312 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 GALNT16Q8N428 558 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 CELF2-AS1Q8N7Q2 184 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 OR6Q1Q8NGQ2 317 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 BAHD1Q8TBE0 780 aaPredicted RBP5.62□□□□□ -1.51
SHQ1-205ENST00000468371 THAP3Q8WTV1 239 aaPredicted RBP5.62□□□□□ -1.51
SHQ1-205ENST00000468371 IPCEF1Q8WWN9 437 aaPredicted RBP5.62□□□□□ -1.51
SHQ1-205ENST00000468371 TP53INP1Q96A56 240 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 L3HYPDHQ96EM0 354 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 C19orf43Q9BQ61 176 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 UTP23Q9BRU9 249 aaKnown RBP5.62□□□□□ -1.51
SHQ1-205ENST00000468371 OR8D2Q9GZM6 311 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 MMP28Q9H239 520 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 NECTIN3Q9NQS3 549 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 SEMA3GQ9NS98 782 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 SPHK1Q9NYA1 384 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 ENTPD4Q9Y227 616 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 UGT2A1Q9Y4X1 527 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 PCDHGA10Q9Y5H3 936 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 PCDHA9Q9Y5H5 950 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 MROH6A6NGR9 719 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 H0YC42 278 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 KIAA0513O60268 411 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 SEC14L2O76054 403 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 YES1P07947 543 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 FHP07954 510 aa5.62□□□□□ -1.51
SHQ1-205ENST00000468371 ANXA4P09525 319 aaPredicted RBP5.62□□□□□ -1.51
SHQ1-205ENST00000468371 ANKRD34CP0C6C1 535 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms