RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 KIR3DP1A8MWS1 328 aa14.35□□□□□ -0.11
SDF4-204ENST00000459994 HRKO00198 91 aa14.35□□□□□ -0.11
SDF4-204ENST00000459994 WWP2O00308 870 aa14.35□□□□□ -0.11
SDF4-204ENST00000459994 COQ9O75208 318 aa14.35□□□□□ -0.11
SDF4-204ENST00000459994 OR2J2O76002 312 aa14.35□□□□□ -0.11
SDF4-204ENST00000459994 OR6B1O95007 311 aa14.35□□□□□ -0.11
SDF4-204ENST00000459994 KRT75O95678 551 aa14.35□□□□□ -0.11
SDF4-204ENST00000459994 PRF1P14222 555 aa14.35□□□□□ -0.11
SDF4-204ENST00000459994 PPIBP23284 216 aaKnown RBP14.35□□□□□ -0.11
SDF4-204ENST00000459994 SOAT1P35610 550 aa14.35□□□□□ -0.11
SDF4-204ENST00000459994 GTDC1Q4AE62 458 aa14.35□□□□□ -0.11
SDF4-204ENST00000459994 SAXO2Q658L1 398 aa14.35□□□□□ -0.11
SDF4-204ENST00000459994 C8orf82Q6P1X6 216 aaPredicted RBP14.35□□□□□ -0.11
SDF4-204ENST00000459994 CCDC121Q6ZUS5 278 aa14.35□□□□□ -0.11
SDF4-204ENST00000459994 C6orf120Q7Z4R8 191 aa14.35□□□□□ -0.11
SDF4-204ENST00000459994 CYP4Z2PQ8N1L4 340 aa14.35□□□□□ -0.11
SDF4-204ENST00000459994 ZNF615Q8N8J6 731 aa14.35□□□□□ -0.11
SDF4-204ENST00000459994 NUP43Q8NFH3 380 aa14.35□□□□□ -0.11
SDF4-204ENST00000459994 SH3GL1Q99961 368 aa14.35□□□□□ -0.11
SDF4-204ENST00000459994 SLC35A5Q9BS91 424 aa14.35□□□□□ -0.11
SDF4-204ENST00000459994 CNPPD1Q9BV87 410 aa14.35□□□□□ -0.11
SDF4-204ENST00000459994 OR8D2Q9GZM6 311 aa14.35□□□□□ -0.11
SDF4-204ENST00000459994 C1orf21Q9H246 121 aa14.35□□□□□ -0.11
SDF4-204ENST00000459994 TPT1P8Q9HAU6 139 aa14.35□□□□□ -0.11
SDF4-204ENST00000459994 IL1RL2Q9HB29 575 aa14.35□□□□□ -0.11
SDF4-204ENST00000459994 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.35□□□□□ -0.112e-9■■■■■ 35.8
SDF4-204ENST00000459994 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.35□□□□□ -0.11
SDF4-204ENST00000459994 PHF3Q92576 2039 aaKnown RBP14.35□□□□□ -0.11
SDF4-204ENST00000459994 NINQ8N4C6 2090 aa14.35□□□□□ -0.11
SDF4-204ENST00000459994 CENPEQ02224 2701 aa14.34□□□□□ -0.11
SDF4-204ENST00000459994 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.34□□□□□ -0.11
SDF4-204ENST00000459994 C15orf38-AP3S2A0A0A6YYH1 394 aa14.34□□□□□ -0.11
SDF4-204ENST00000459994 PRSS44E7EML9 344 aa14.34□□□□□ -0.11
SDF4-204ENST00000459994 CLIC1O00299 241 aa14.34□□□□□ -0.11
SDF4-204ENST00000459994 ASNA1O43681 348 aa14.34□□□□□ -0.11
SDF4-204ENST00000459994 CLPSP04118 112 aa14.34□□□□□ -0.11
SDF4-204ENST00000459994 SSTR4P31391 388 aa14.34□□□□□ -0.11
SDF4-204ENST00000459994 CHI3L1P36222 383 aaPredicted RBP14.34□□□□□ -0.11
SDF4-204ENST00000459994 CPOXP36551 454 aa14.34□□□□□ -0.11
SDF4-204ENST00000459994 SOX3P41225 446 aa14.34□□□□□ -0.11
SDF4-204ENST00000459994 SLC37A1P57057 533 aa14.34□□□□□ -0.11
SDF4-204ENST00000459994 TXNL4AP83876 142 aaKnown RBP14.34□□□□□ -0.11
SDF4-204ENST00000459994 EXOSC7Q15024 291 aaKnown RBP14.34□□□□□ -0.11
SDF4-204ENST00000459994 NANOGP8Q6NSW7 305 aa14.34□□□□□ -0.11
SDF4-204ENST00000459994 ZCCHC12Q6PEW1 402 aa14.34□□□□□ -0.11
SDF4-204ENST00000459994 C3P1Q6ZMU1 363 aa14.34□□□□□ -0.11
SDF4-204ENST00000459994 Q6ZPB1 254 aaPredicted RBP14.34□□□□□ -0.11
SDF4-204ENST00000459994 ARPINQ7Z6K5 226 aa14.34□□□□□ -0.11
SDF4-204ENST00000459994 OR52R1Q8NGF1 315 aa14.34□□□□□ -0.11
SDF4-204ENST00000459994 OR8J3Q8NGG0 315 aa14.34□□□□□ -0.11
SDF4-204ENST00000459994 OR5AK3PQ8NH89 298 aa14.34□□□□□ -0.11
SDF4-204ENST00000459994 FBXO27Q8NI29 283 aa14.34□□□□□ -0.11
SDF4-204ENST00000459994 GIMAP5Q96F15 307 aa14.34□□□□□ -0.11
SDF4-204ENST00000459994 MAGED4Q96JG8 741 aa14.34□□□□□ -0.11
SDF4-204ENST00000459994 MS4A4EQ96PG1 132 aa14.34□□□□□ -0.11
SDF4-204ENST00000459994 CPPED1Q9BRF8 314 aaPredicted RBP14.34□□□□□ -0.11
SDF4-204ENST00000459994 OR10A5Q9H207 317 aa14.34□□□□□ -0.11
SDF4-204ENST00000459994 RAD21L1Q9H4I0 556 aa14.34□□□□□ -0.11
SDF4-204ENST00000459994 NANOGQ9H9S0 305 aa14.34□□□□□ -0.11
SDF4-204ENST00000459994 GPATCH2Q9NW75 528 aa14.34□□□□□ -0.11
SDF4-204ENST00000459994 COPS7AQ9UBW8 275 aa14.34□□□□□ -0.11
SDF4-204ENST00000459994 PRODH2Q9UF12 536 aa14.34□□□□□ -0.11
SDF4-204ENST00000459994 BCAP29Q9UHQ4 241 aa14.34□□□□□ -0.11
SDF4-204ENST00000459994 CFL2Q9Y281 166 aa14.34□□□□□ -0.11
SDF4-204ENST00000459994 HRH3Q9Y5N1 445 aa14.34□□□□□ -0.11
SDF4-204ENST00000459994 HCFC1P51610 2035 aa14.34□□□□□ -0.11
SDF4-204ENST00000459994 TTC36A6NLP5 189 aa14.33□□□□□ -0.12
SDF4-204ENST00000459994 OR6C76A6NM76 312 aa14.33□□□□□ -0.12
SDF4-204ENST00000459994 EVPLLA8MZ36 301 aa14.33□□□□□ -0.12
SDF4-204ENST00000459994 G3V3Y1 287 aa14.33□□□□□ -0.12
SDF4-204ENST00000459994 PEX1O43933 1283 aa14.33□□□□□ -0.12
SDF4-204ENST00000459994 HS6ST1O60243 411 aa14.33□□□□□ -0.12
SDF4-204ENST00000459994 SOX30O94993 753 aa14.33□□□□□ -0.12
SDF4-204ENST00000459994 ZNF24P17028 368 aa14.33□□□□□ -0.12
SDF4-204ENST00000459994 SLC6A2P23975 617 aa14.33□□□□□ -0.12
SDF4-204ENST00000459994 PRIM2P49643 509 aa14.33□□□□□ -0.12
SDF4-204ENST00000459994 EMDP50402 254 aa14.33□□□□□ -0.12
SDF4-204ENST00000459994 RASSF2P50749 326 aa14.33□□□□□ -0.12
SDF4-204ENST00000459994 SSR4P51571 173 aa14.33□□□□□ -0.12
SDF4-204ENST00000459994 PSME3P61289 254 aa14.33□□□□□ -0.12
SDF4-204ENST00000459994 MXRA7P84157 204 aa14.33□□□□□ -0.12
SDF4-204ENST00000459994 DUSP8Q13202 625 aa14.33□□□□□ -0.12
SDF4-204ENST00000459994 TP53BP2Q13625 1128 aa14.33□□□□□ -0.12
SDF4-204ENST00000459994 CAPRIN1Q14444 709 aaKnown RBP14.33□□□□□ -0.12
SDF4-204ENST00000459994 EXOSC6Q5RKV6 272 aaKnown RBP14.33□□□□□ -0.12
SDF4-204ENST00000459994 SP5Q6BEB4 398 aaPredicted RBP14.33□□□□□ -0.12
SDF4-204ENST00000459994 C16orf89Q6UX73 402 aa14.33□□□□□ -0.12
SDF4-204ENST00000459994 IL20RBQ6UXL0 311 aa14.33□□□□□ -0.12
SDF4-204ENST00000459994 RNF111Q6ZNA4 994 aa14.33□□□□□ -0.12
SDF4-204ENST00000459994 RINLQ6ZS11 566 aa14.33□□□□□ -0.12
SDF4-204ENST00000459994 YTHDF3Q7Z739 585 aaKnown RBP14.33□□□□□ -0.12
SDF4-204ENST00000459994 MRGPRGQ86SM5 289 aa14.33□□□□□ -0.12
SDF4-204ENST00000459994 SPPL2CQ8IUH8 684 aa14.33□□□□□ -0.12
SDF4-204ENST00000459994 LURAP1LQ8IV03 231 aa14.33□□□□□ -0.12
SDF4-204ENST00000459994 PGAM4Q8N0Y7 254 aa14.33□□□□□ -0.12
SDF4-204ENST00000459994 CLEC4FQ8N1N0 589 aa14.33□□□□□ -0.12
SDF4-204ENST00000459994 TMEM156Q8N614 296 aa14.33□□□□□ -0.12
SDF4-204ENST00000459994 HORMAD2Q8N7B1 307 aa14.33□□□□□ -0.12
SDF4-204ENST00000459994 RBM15BQ8NDT2 890 aaKnown RBP14.33□□□□□ -0.12
SDF4-204ENST00000459994 SIMC1Q8NDZ2 872 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms