RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 ZNF630Q2M218 657 aaPredicted RBP9.82□□□□□ -0.84
UBR4-208ENST00000459947 PRAMEF8Q5VWM4 474 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 PRAMEF7Q5VXH5 474 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 C16orf62Q7Z3J2 963 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 DOK4Q8TEW6 326 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 GPATCH2Q9NW75 528 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 TUBA8Q9NY65 449 aaPredicted RBP9.82□□□□□ -0.84
UBR4-208ENST00000459947 PPP4R1LQ9P1A2 415 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 DTX4Q9Y2E6 619 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 WIF1Q9Y5W5 379 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 ANGPT2O15123 496 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 SUSD5O60279 629 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 CBR3O75828 277 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 NPPAP01160 153 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 CYP4B1P13584 511 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 TBXA2RP21731 343 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 C17orf67Q0P5P2 114 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 TIGD3Q6B0B8 471 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 MDGA2Q7Z553 956 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 SLC30A8Q8IWU4 369 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 OR4K17Q8NGC6 315 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 RMND5BQ96G75 393 aaPredicted RBP9.81□□□□□ -0.84
UBR4-208ENST00000459947 TAAR6Q96RI8 345 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 NMUR2Q9GZQ4 415 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 LUZP4Q9P127 313 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 DCTN4Q9UJW0 460 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 NDUFAF1Q9Y375 327 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 A0A1B0GVC2 190 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 SCDO00767 359 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 AQP7O14520 342 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 MLLT10P55197 1068 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 GAB1Q13480 694 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 AGKQ53H12 422 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 TMEM211Q6ICI0 200 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 OR7D2Q96RA2 312 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 SH3GL1Q99961 368 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 PLSCR2Q9NRY7 297 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 EXPH5Q8NEV8 1989 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 IGLV3-32A0A0A0MS00 114 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 PRRG2O14669 202 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 UGT2B11O75310 529 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 STX11O75558 287 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 CBX6O95503 412 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 EVI2BP34910 448 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 MAN2A2P49641 1150 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 ARHGAP11BQ3KRB8 267 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 FAM180BQ6P0A1 224 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 C16orf47Q6ZP98 133 aaPredicted RBP9.81□□□□□ -0.84
UBR4-208ENST00000459947 ZNF621Q6ZSS3 439 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 PLCZ1Q86YW0 608 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 CLECL1Q8IZS7 167 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 ADOQ96SZ5 270 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 OR2B2Q9GZK3 357 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 CAPN7Q9Y6W3 813 aa9.81□□□□□ -0.84
UBR4-208ENST00000459947 A0A1W2PP18 115 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 EVPLLA8MZ36 301 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 ALG1L2C9J202 215 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 UTS2O95399 124 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 ABOP16442 354 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 PTPN6P29350 595 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 SRD5A2P31213 254 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 CORO7P57737 925 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 DCST2Q5T1A1 773 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 ANGPTL8Q6UXH0 198 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 Q6ZPB1 254 aaPredicted RBP9.8□□□□□ -0.84
UBR4-208ENST00000459947 PRR22Q8IZ63 422 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 OR52N2Q8NGI0 321 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 EBF4Q9BQW3 602 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 ARMC7Q9H6L4 198 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 KCNK2O95069 426 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 HPNP05981 417 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 STX5Q13190 355 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 NNATQ16517 81 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 DUSP5Q16690 384 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 TIGD2Q4W5G0 525 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 C6orf10Q5SRN2 563 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 LRIF1Q5T3J3 769 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 AP1ARQ63HQ0 302 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 CMIPQ8IY22 773 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 PM20D2Q8IYS1 436 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 DPP10Q8N608 796 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 PCYOX1LQ8NBM8 494 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 PHF10Q8WUB8 498 aaKnown RBP9.8□□□□□ -0.84
UBR4-208ENST00000459947 ZNF317Q96PQ6 595 aaPredicted RBP9.8□□□□□ -0.84
UBR4-208ENST00000459947 SPATA9Q9BWV2 254 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 HES7Q9BYE0 225 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 ZNF385DQ9H6B1 395 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 EXO5Q9H790 373 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 ZNF703Q9H7S9 590 aaPredicted RBP9.8□□□□□ -0.84
UBR4-208ENST00000459947 NPIPA5E9PKD4 350 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 NR5A2O00482 541 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 NDUFAB1O14561 156 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 ACTL6AO96019 429 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 SNRPB2P08579 225 aaKnown RBP9.8□□□□□ -0.84
UBR4-208ENST00000459947 GDF1P27539 372 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 IL12AP29459 219 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 DNASE1L1P49184 302 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 ATP12AP54707 1039 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 NME5P56597 212 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 C4orf17Q53FE4 359 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms