RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 KRT74Q7RTS7 529 aa18.34■□□□□ 0.53
CNEP1R1-203ENST00000458059 NR2C2APQ86WQ0 139 aa18.34■□□□□ 0.53
CNEP1R1-203ENST00000458059 QRFPRQ96P65 431 aa18.34■□□□□ 0.53
CNEP1R1-203ENST00000458059 OR7D2Q96RA2 312 aa18.34■□□□□ 0.53
CNEP1R1-203ENST00000458059 RNF32Q9H0A6 362 aa18.34■□□□□ 0.53
CNEP1R1-203ENST00000458059 MBNL1Q9NR56 388 aaKnown RBP18.34■□□□□ 0.53
CNEP1R1-203ENST00000458059 F5P12259 2224 aa18.34■□□□□ 0.53
CNEP1R1-203ENST00000458059 GTPBP1O00178 669 aaKnown RBP18.34■□□□□ 0.53
CNEP1R1-203ENST00000458059 PRKAR1AP10644 381 aa18.34■□□□□ 0.53
CNEP1R1-203ENST00000458059 ELK1P19419 428 aa18.34■□□□□ 0.53
CNEP1R1-203ENST00000458059 RFX3P48380 749 aa18.34■□□□□ 0.53
CNEP1R1-203ENST00000458059 REEP5Q00765 189 aa18.34■□□□□ 0.53
CNEP1R1-203ENST00000458059 ID2Q02363 134 aa18.34■□□□□ 0.53
CNEP1R1-203ENST00000458059 FAPQ12884 760 aa18.34■□□□□ 0.53
CNEP1R1-203ENST00000458059 SLC9A5Q14940 896 aa18.34■□□□□ 0.53
CNEP1R1-203ENST00000458059 MINDY4Q4G0A6 757 aa18.34■□□□□ 0.53
CNEP1R1-203ENST00000458059 SUN3Q8TAQ9 357 aa18.34■□□□□ 0.53
CNEP1R1-203ENST00000458059 KLHL1Q9NR64 748 aa18.34■□□□□ 0.53
CNEP1R1-203ENST00000458059 SIRT4Q9Y6E7 314 aaPredicted RBP18.34■□□□□ 0.53
CNEP1R1-203ENST00000458059 KIF26AQ9ULI4 1882 aaPredicted RBP18.34■□□□□ 0.53
CNEP1R1-203ENST00000458059 TRBV23OR9-2A0A075B6M9 112 aa18.33■□□□□ 0.53
CNEP1R1-203ENST00000458059 NPIPA5A0A0B4J1W7 369 aa18.33■□□□□ 0.53
CNEP1R1-203ENST00000458059 CENPVL1A0A0U1RR11 272 aa18.33■□□□□ 0.53
CNEP1R1-203ENST00000458059 NPIPA7E9PJI5 369 aa18.33■□□□□ 0.53
CNEP1R1-203ENST00000458059 CDC42EP2O14613 210 aa18.33■□□□□ 0.53
CNEP1R1-203ENST00000458059 AIFM1O95831 613 aa18.33■□□□□ 0.53
CNEP1R1-203ENST00000458059 PAK4O96013 591 aaPredicted RBP18.33■□□□□ 0.53
CNEP1R1-203ENST00000458059 ALPPP05187 535 aa18.33■□□□□ 0.53
CNEP1R1-203ENST00000458059 NPIPA8P0DM63 369 aa18.33■□□□□ 0.53
CNEP1R1-203ENST00000458059 TBXA2RP21731 343 aa18.33■□□□□ 0.53
CNEP1R1-203ENST00000458059 PPM1AP35813 382 aa18.33■□□□□ 0.53
CNEP1R1-203ENST00000458059 OR10A3P58181 314 aa18.33■□□□□ 0.53
CNEP1R1-203ENST00000458059 RPS7P62081 194 aaKnown RBP18.33■□□□□ 0.53
CNEP1R1-203ENST00000458059 ENTPD8Q5MY95 495 aa18.33■□□□□ 0.53
CNEP1R1-203ENST00000458059 PCNPQ8WW12 178 aaKnown RBP18.33■□□□□ 0.53
CNEP1R1-203ENST00000458059 DEDD2Q8WXF8 326 aa18.33■□□□□ 0.53
CNEP1R1-203ENST00000458059 INSM2Q96T92 566 aaPredicted RBP18.33■□□□□ 0.53
CNEP1R1-203ENST00000458059 PPP1R3EQ9H7J1 279 aa18.33■□□□□ 0.53
CNEP1R1-203ENST00000458059 CXXC1Q9P0U4 656 aaPredicted RBP18.33■□□□□ 0.53
CNEP1R1-203ENST00000458059 COL4A3Q01955 1670 aa18.33■□□□□ 0.53
CNEP1R1-203ENST00000458059 TMEM129A0AVI4 362 aa18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 MAN2B1O00754 1011 aa18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 SRP9P49458 86 aaKnown RBP18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 AGFG1P52594 562 aaKnown RBP18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 EPHA5P54756 1037 aa18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 PPP3R1P63098 170 aa18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 TGM3Q08188 693 aa18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 ZNF155Q12901 538 aaPredicted RBP18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 ZNF234Q14588 700 aa18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 ACOT4Q8N9L9 421 aa18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 FAM181AQ8N9Y4 354 aa18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 FGF11Q92914 225 aa18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 ZNF514Q96K75 400 aaPredicted RBP18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 GDF15Q99988 308 aa18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 PPIL3Q9H2H8 161 aaKnown RBP18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 POLMQ9NP87 494 aaPredicted RBP18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 HINT3Q9NQE9 182 aaKnown RBP18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 RBFOX1Q9NWB1 397 aaKnown RBP18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 H2AFY2Q9P0M6 372 aaPredicted RBP18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 ENTPD4Q9Y227 616 aa18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 MRPS7Q9Y2R9 242 aaKnown RBP18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 MRPS23Q9Y3D9 190 aaKnown RBP18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 CHST2Q9Y4C5 530 aa18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 ALPK2Q86TB3 2170 aa18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 SYPP08247 313 aa18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 P2RY2P41231 377 aa18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 PDX1P52945 283 aa18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 CDK3Q00526 305 aa18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 MLF2Q15773 248 aaPredicted RBP18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 ARL9Q6T311 187 aa18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 SYT9Q86SS6 491 aa18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 FBXL6Q8N531 539 aa18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 ENKD1Q9H0I2 346 aa18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 TEKT2Q9UIF3 430 aa18.33■□□□□ 0.52
CNEP1R1-203ENST00000458059 A0A0A6YYD5 115 aa18.32■□□□□ 0.52
CNEP1R1-203ENST00000458059 C17orf113A0A1B0GUU1 675 aa18.32■□□□□ 0.52
CNEP1R1-203ENST00000458059 ZIC2O95409 532 aaPredicted RBP18.32■□□□□ 0.52
CNEP1R1-203ENST00000458059 GKN3PP0CG01 181 aa18.32■□□□□ 0.52
CNEP1R1-203ENST00000458059 CPN2P22792 545 aa18.32■□□□□ 0.52
CNEP1R1-203ENST00000458059 EFNB1P98172 346 aa18.32■□□□□ 0.52
CNEP1R1-203ENST00000458059 SLC37A3Q8NCC5 494 aa18.32■□□□□ 0.52
CNEP1R1-203ENST00000458059 NUP43Q8NFH3 380 aa18.32■□□□□ 0.52
CNEP1R1-203ENST00000458059 PIGXQ8TBF5 258 aa18.32■□□□□ 0.52
CNEP1R1-203ENST00000458059 C17orf50Q8WW18 174 aa18.32■□□□□ 0.52
CNEP1R1-203ENST00000458059 DACT3Q96B18 629 aaPredicted RBP18.32■□□□□ 0.52
CNEP1R1-203ENST00000458059 LRIG1Q96JA1 1093 aa18.32■□□□□ 0.52
CNEP1R1-203ENST00000458059 MCHR1Q99705 422 aa18.32■□□□□ 0.52
CNEP1R1-203ENST00000458059 SLC38A1Q9H2H9 487 aa18.32■□□□□ 0.52
CNEP1R1-203ENST00000458059 BEX1Q9HBH7 125 aa18.32■□□□□ 0.52
CNEP1R1-203ENST00000458059 ACSS1Q9NUB1 689 aaPredicted RBP18.32■□□□□ 0.52
CNEP1R1-203ENST00000458059 CACNA1CQ13936 2221 aa18.32■□□□□ 0.52
CNEP1R1-203ENST00000458059 ARID1BQ8NFD5 2236 aaPredicted RBP18.32■□□□□ 0.52
CNEP1R1-203ENST00000458059 TBC1D3BA6NDS4 549 aa18.32■□□□□ 0.52
CNEP1R1-203ENST00000458059 MAGEB4O15481 346 aaPredicted RBP18.32■□□□□ 0.52
CNEP1R1-203ENST00000458059 MLLT3P42568 568 aaPredicted RBP18.32■□□□□ 0.52
CNEP1R1-203ENST00000458059 GCGRP47871 477 aa18.32■□□□□ 0.52
CNEP1R1-203ENST00000458059 EVX1P49640 407 aa18.32■□□□□ 0.52
CNEP1R1-203ENST00000458059 NDUFA9Q16795 377 aa18.32■□□□□ 0.52
CNEP1R1-203ENST00000458059 RPTNQ6XPR3 784 aa18.32■□□□□ 0.52
CNEP1R1-203ENST00000458059 SLC16A11Q8NCK7 471 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms