RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 NDUFS1P28331 727 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 FASLGP48023 281 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 INHBCP55103 352 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 CHIT1Q13231 466 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 C1orf61Q13536 156 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 DOC2AQ14183 400 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 FASTKQ14296 549 aaKnown RBP4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 PLK5Q496M5 336 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 LIPJQ5W064 366 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 LYSMD4Q5XG99 296 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 FAM219BQ5XKK7 198 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 TMEM211Q6ICI0 200 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 CAPN13Q6MZZ7 669 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 SLC25A24Q6NUK1 477 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 SCIMPQ6UWF3 145 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 ZNF771Q7L3S4 317 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 EFL1Q7Z2Z2 1120 aaKnown RBP4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 TAF8Q7Z7C8 310 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 C2orf73Q8N5S3 287 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 LMNTD1Q8N9Z9 388 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 LINC01555Q8NAE3 123 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 OR52N2Q8NGI0 321 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 OR10S1Q8NGN2 331 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 OR2L8Q8NGY9 312 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 HMGCLL1Q8TB92 370 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 TWIST2Q8WVJ9 160 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 SMPDL3AQ92484 453 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 WDR34Q96EX3 536 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 C5orf30Q96GV9 206 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 PPP1R36Q96LQ0 422 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 C3orf30Q96M34 536 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 DIRC2Q96SL1 478 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 CCT7Q99832 543 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 CCDC28BQ9BUN5 200 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 LRRC61Q9BV99 259 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 NUSAP1Q9BXS6 441 aaKnown RBP4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 GSDMCQ9BYG8 508 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 SLC29A3Q9BZD2 475 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 ZNF350Q9GZX5 532 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 KIR3DX1Q9H7L2 352 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 ACTR8Q9H981 624 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 AKIRIN1Q9H9L7 192 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 SLC40A1Q9NP59 571 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 TCF7L2Q9NQB0 619 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 SAR1AQ9NR31 198 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 SPATA7Q9P0W8 599 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 SNX7Q9UNH6 387 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 FIS1Q9Y3D6 152 aa4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 STRAPQ9Y3F4 350 aaKnown RBP4.86□□□□□ -1.63
HMGB1P4-201ENST00000455362 ADAMTS9Q9P2N4 1935 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 KNTC1P50748 2209 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 ASCC3Q8N3C0 2202 aaKnown RBP4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 OTOGLQ3ZCN5 2332 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 ZFHX2Q9C0A1 2572 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 KCNE1BA0A087WTH5 132 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 KIR2DS5A0A0G2JLQ3 304 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 A0A0G2JNG1 304 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 A0A1B0GVT2 93 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 ATP6AP2A0A1C7CYW4 349 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 A0A1W2PPV9 198 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 TMEM247A6NEH6 219 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 ERICH4A6NGS2 130 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 CAPN14A8MX76 684 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 NPIPB11E5RHQ5 1161 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 E7EQ34 232 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 LMO7DNF2Z398 122 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 KIR2DS3K7RE56 304 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 SLC30A4O14863 429 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 YY2O15391 372 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 UGDHO60701 494 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 ATP6AP2O75787 350 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 KCNK5O95279 499 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 HLA-DQA2P01906 255 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 KRT6AP02538 564 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 KRT6BP04259 564 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 HIST1H2ABP04908 130 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 SERPINA6P08185 405 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 SP9P0CG40 484 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 C1GALT1C1LP0DN25 315 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 T-ENOLP0DO92 83 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 VPREB1P12018 145 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 NCF2P19878 526 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 CD22P20273 847 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 AHCYP23526 432 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 HMOX2P30519 316 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 PKLRP30613 574 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 CNR2P34972 360 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 LIMS1P48059 325 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 KRT6CP48668 564 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 DHPSP49366 369 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 HTR6P50406 440 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 ARSFP54793 590 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 C21orf59P57076 290 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 HNRNPKP61978 463 aaKnown RBP eCLIP4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 TBPL1P62380 186 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 UBE2IP63279 158 aaKnown RBP4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 BNC1Q01954 994 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 IRF8Q02556 426 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 NHLH2Q02577 135 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 COX10Q12887 443 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms