RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 ZCCHC3Q9NUD5 404 aaKnown RBP13.34□□□□□ -0.27
USP39-206ENST00000448971 INTS9Q9NV88 658 aaKnown RBP13.34□□□□□ -0.27
USP39-206ENST00000448971 TINAGQ9UJW2 476 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 LIPGQ9Y5X9 500 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 ANKRD33BA6NCL7 494 aa13.33□□□□□ -0.28
USP39-206ENST00000448971 OR6C70A6NIJ9 312 aa13.33□□□□□ -0.28
USP39-206ENST00000448971 GNB5O14775 395 aa13.33□□□□□ -0.28
USP39-206ENST00000448971 ZNHIT1O43257 154 aa13.33□□□□□ -0.28
USP39-206ENST00000448971 EMC8O43402 210 aa13.33□□□□□ -0.28
USP39-206ENST00000448971 SNX4O95219 450 aa13.33□□□□□ -0.28
USP39-206ENST00000448971 C6orf47O95873 294 aa13.33□□□□□ -0.28
USP39-206ENST00000448971 TPOP07202 933 aa13.33□□□□□ -0.28
USP39-206ENST00000448971 CASP3P42574 277 aa13.33□□□□□ -0.28
USP39-206ENST00000448971 MRPS22P82650 360 aaKnown RBP13.33□□□□□ -0.28
USP39-206ENST00000448971 EFR3AQ14156 821 aa13.33□□□□□ -0.28
USP39-206ENST00000448971 MLC1Q15049 377 aa13.33□□□□□ -0.28
USP39-206ENST00000448971 DECR1Q16698 335 aa13.33□□□□□ -0.28
USP39-206ENST00000448971 LSM12Q3MHD2 195 aaKnown RBP13.33□□□□□ -0.28
USP39-206ENST00000448971 VPS26BQ4G0F5 336 aa13.33□□□□□ -0.28
USP39-206ENST00000448971 OGFOD2Q6N063 350 aa13.33□□□□□ -0.28
USP39-206ENST00000448971 ARHGAP11AQ6P4F7 1023 aa13.33□□□□□ -0.28
USP39-206ENST00000448971 Q6ZPB1 254 aaPredicted RBP13.33□□□□□ -0.28
USP39-206ENST00000448971 CD163Q86VB7 1156 aa13.33□□□□□ -0.28
USP39-206ENST00000448971 SPPL2CQ8IUH8 684 aa13.33□□□□□ -0.28
USP39-206ENST00000448971 RIMKLAQ8IXN7 391 aa13.33□□□□□ -0.28
USP39-206ENST00000448971 OR4N2Q8NGD1 307 aa13.33□□□□□ -0.28
USP39-206ENST00000448971 CEP70Q8NHQ1 597 aa13.33□□□□□ -0.28
USP39-206ENST00000448971 NUDT8Q8WV74 236 aa13.33□□□□□ -0.28
USP39-206ENST00000448971 OR5P2Q8WZ92 322 aa13.33□□□□□ -0.28
USP39-206ENST00000448971 SLC9A6Q92581 669 aa13.33□□□□□ -0.28
USP39-206ENST00000448971 SLC35A4Q96G79 324 aa13.33□□□□□ -0.28
USP39-206ENST00000448971 LMF2Q9BU23 707 aaKnown RBP13.33□□□□□ -0.28
USP39-206ENST00000448971 ANGPTL4Q9BY76 406 aa13.33□□□□□ -0.28
USP39-206ENST00000448971 LDAHQ9H6V9 325 aa13.33□□□□□ -0.28
USP39-206ENST00000448971 ZDHHC11Q9H8X9 412 aa13.33□□□□□ -0.28
USP39-206ENST00000448971 PROK2Q9HC23 129 aa13.33□□□□□ -0.28
USP39-206ENST00000448971 GALNT9Q9HCQ5 603 aa13.33□□□□□ -0.28
USP39-206ENST00000448971 MRTO4Q9UKD2 239 aaKnown RBP13.33□□□□□ -0.28
USP39-206ENST00000448971 CBLCQ9ULV8 474 aa13.33□□□□□ -0.28
USP39-206ENST00000448971 MAP1AP78559 2803 aaPredicted RBP13.33□□□□□ -0.28
USP39-206ENST00000448971 EXPH5Q8NEV8 1989 aa13.32□□□□□ -0.28
USP39-206ENST00000448971 UQCRHLA0A096LP55 91 aa13.32□□□□□ -0.28
USP39-206ENST00000448971 PRRG2O14669 202 aa13.32□□□□□ -0.28
USP39-206ENST00000448971 KCNH1O95259 989 aa13.32□□□□□ -0.28
USP39-206ENST00000448971 CELA3AP09093 270 aa13.32□□□□□ -0.28
USP39-206ENST00000448971 ESRRAP11474 423 aaPredicted RBP13.32□□□□□ -0.28
USP39-206ENST00000448971 SSTR2P30874 369 aa13.32□□□□□ -0.28
USP39-206ENST00000448971 PTGS2P35354 604 aa13.32□□□□□ -0.28
USP39-206ENST00000448971 PRIM2P49643 509 aa13.32□□□□□ -0.28
USP39-206ENST00000448971 CLNS1AP54105 237 aaKnown RBP13.32□□□□□ -0.28
USP39-206ENST00000448971 PSMD4P55036 377 aaKnown RBP13.32□□□□□ -0.28
USP39-206ENST00000448971 NME5P56597 212 aa13.32□□□□□ -0.28
USP39-206ENST00000448971 C21orf58P58505 322 aa13.32□□□□□ -0.28
USP39-206ENST00000448971 TP53BP2Q13625 1128 aa13.32□□□□□ -0.28
USP39-206ENST00000448971 TOMM20Q15388 145 aa13.32□□□□□ -0.28
USP39-206ENST00000448971 HYAL4Q2M3T9 481 aa13.32□□□□□ -0.28
USP39-206ENST00000448971 OR4F3Q6IEY1 312 aa13.32□□□□□ -0.28
USP39-206ENST00000448971 ANGPTL8Q6UXH0 198 aa13.32□□□□□ -0.28
USP39-206ENST00000448971 SPNS3Q6ZMD2 512 aa13.32□□□□□ -0.28
USP39-206ENST00000448971 CAMKMTQ7Z624 323 aa13.32□□□□□ -0.28
USP39-206ENST00000448971 CDRT4Q8N9R6 151 aa13.32□□□□□ -0.28
USP39-206ENST00000448971 ACBD4Q8NC06 268 aa13.32□□□□□ -0.28
USP39-206ENST00000448971 OR56A1Q8NGH5 318 aa13.32□□□□□ -0.28
USP39-206ENST00000448971 GPR151Q8TDV0 419 aa13.32□□□□□ -0.28
USP39-206ENST00000448971 FAM120BQ96EK7 910 aaKnown RBP13.32□□□□□ -0.28
USP39-206ENST00000448971 OTUB1Q96FW1 271 aaPredicted RBP13.32□□□□□ -0.28
USP39-206ENST00000448971 RMND5BQ96G75 393 aaPredicted RBP13.32□□□□□ -0.28
USP39-206ENST00000448971 TMEM41AQ96HV5 264 aa13.32□□□□□ -0.28
USP39-206ENST00000448971 C7orf26Q96N11 449 aa13.32□□□□□ -0.28
USP39-206ENST00000448971 SIRT3Q9NTG7 399 aaPredicted RBP13.32□□□□□ -0.28
USP39-206ENST00000448971 AIG1Q9NVV5 245 aa13.32□□□□□ -0.28
USP39-206ENST00000448971 NIPBLQ6KC79 2804 aaeCLIP13.32□□□□□ -0.28
USP39-206ENST00000448971 TTC36A6NLP5 189 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 E9PBE3 544 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 SCO2O43819 266 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 TSPAN2O60636 221 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 DIAPH2O60879 1101 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 ICOSLGO75144 302 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 TRIM3O75382 744 aaPredicted RBP13.31□□□□□ -0.28
USP39-206ENST00000448971 ALDOCP09972 364 aaKnown RBP13.31□□□□□ -0.28
USP39-206ENST00000448971 RFPL3SP0C7P2 107 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 CAPN3P20807 821 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 GABRA3P34903 492 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 MAN2A2P49641 1150 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 SMSP52788 366 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 PNLIPRP2P54317 469 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 LASP1Q14847 261 aaKnown RBP13.31□□□□□ -0.28
USP39-206ENST00000448971 SLC10A1Q14973 349 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 DPY19L1Q2PZI1 675 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 CYP27C1Q4G0S4 372 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 SLC9B1Q4ZJI4 515 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 MFSD12Q6NUT3 480 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 SLC30A6Q6NXT4 461 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 TMEM81Q6P7N7 255 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 SPATA19Q7Z5L4 167 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 EID3Q8N140 333 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 OR4A15Q8NGL6 344 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 OR1J4Q8NGS1 313 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 OR5AK3PQ8NH89 298 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 PIK3R3Q92569 461 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms