RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 COX10Q12887 443 aa12.56□□□□□ -0.4
USP42-203ENST00000426246 ADAM15Q13444 863 aa12.56□□□□□ -0.4
USP42-203ENST00000426246 DCUN1D3Q8IWE4 304 aa12.56□□□□□ -0.4
USP42-203ENST00000426246 SLC16A11Q8NCK7 471 aa12.56□□□□□ -0.4
USP42-203ENST00000426246 IL17RDQ8NFM7 739 aa12.56□□□□□ -0.4
USP42-203ENST00000426246 OR13C5Q8NGS8 318 aa12.56□□□□□ -0.4
USP42-203ENST00000426246 OR8K3Q8NH51 312 aa12.56□□□□□ -0.4
USP42-203ENST00000426246 TMEM255BQ8WV15 326 aa12.56□□□□□ -0.4
USP42-203ENST00000426246 SPRYD4Q8WW59 207 aaPredicted RBP12.56□□□□□ -0.4
USP42-203ENST00000426246 LRIG1Q96JA1 1093 aa12.56□□□□□ -0.4
USP42-203ENST00000426246 SLC22A4Q9H015 551 aa12.56□□□□□ -0.4
USP42-203ENST00000426246 GABARAPL1Q9H0R8 117 aa12.56□□□□□ -0.4
USP42-203ENST00000426246 CCDC86Q9H6F5 360 aaKnown RBP12.56□□□□□ -0.4
USP42-203ENST00000426246 WDR26Q9H7D7 661 aa12.56□□□□□ -0.4
USP42-203ENST00000426246 SPHK1Q9NYA1 384 aa12.56□□□□□ -0.4
USP42-203ENST00000426246 SEC14L4Q9UDX3 406 aa12.56□□□□□ -0.4
USP42-203ENST00000426246 GRIP1Q9Y3R0 1128 aa12.56□□□□□ -0.4
USP42-203ENST00000426246 TICRRQ7Z2Z1 1910 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 H0Y8X5 98 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 RAB36O95755 333 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 CHRM4P08173 479 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 TALDO1P37837 337 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 TATDN3Q17R31 274 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 CPA6Q8N4T0 437 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 LCN9Q8WX39 176 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 TM9SF4Q92544 642 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 FGF14Q92915 247 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 TEX12Q9BXU0 123 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 TMEM45AQ9NWC5 275 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 TRAV27A0A087WT01 109 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 A0A087WUU8 490 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 A0A1B0GVT2 93 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 ZAR1LA6NP61 321 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 RASGRP1O95267 797 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 CLUP10909 449 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 BMP7P18075 431 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 RPL3P39023 403 aaKnown RBP12.55□□□□□ -0.4
USP42-203ENST00000426246 HTR3AP46098 478 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 MRPL19P49406 292 aaKnown RBP12.55□□□□□ -0.4
USP42-203ENST00000426246 SMSP52788 366 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 DCDC1P59894 354 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 FABP5Q01469 135 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 PDGFRLQ15198 375 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 BCL2L15Q5TBC7 163 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 LCN1P1Q5VSP4 162 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 PRSS58Q8IYP2 241 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 NUP43Q8NFH3 380 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 OR5P2Q8WZ92 322 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 TSACCQ96A04 125 aaPredicted RBP12.55□□□□□ -0.4
USP42-203ENST00000426246 OMA1Q96E52 524 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 OR2A14Q96R47 310 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 INSM2Q96T92 566 aaPredicted RBP12.55□□□□□ -0.4
USP42-203ENST00000426246 COQ7Q99807 217 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 RPP25Q9BUL9 199 aaKnown RBP12.55□□□□□ -0.4
USP42-203ENST00000426246 FAIM2Q9BWQ8 316 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 SPRTNQ9H040 489 aaPredicted RBP12.55□□□□□ -0.4
USP42-203ENST00000426246 NFKBIL1Q9UBC1 381 aaPredicted RBP12.55□□□□□ -0.4
USP42-203ENST00000426246 SERGEFQ9UGK8 458 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 ENOPH1Q9UHY7 261 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 MGAT4BQ9UQ53 548 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 RPP14O95059 124 aaKnown RBP12.55□□□□□ -0.4
USP42-203ENST00000426246 LALBAP00709 142 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 ALPPP05187 535 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 CD3GP09693 182 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 S100A1P23297 94 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 SSTR2P30874 369 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 IFITM2Q01629 132 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 DUSP2Q05923 314 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 HNRNPA1L2Q32P51 320 aaKnown RBP12.55□□□□□ -0.4
USP42-203ENST00000426246 CEP78Q5JTW2 689 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 LYPD8Q6UX82 237 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 DPPA4Q7L190 304 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 YIPF7Q8N8F6 280 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 SLC37A3Q8NCC5 494 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 OR6K6Q8NGW6 343 aa12.55□□□□□ -0.4
USP42-203ENST00000426246 ISG20L2Q9H9L3 353 aaKnown RBP12.55□□□□□ -0.4
USP42-203ENST00000426246 DAPL1A0PJW8 107 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 ISPDA4D126 451 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 C12orf71A8MTZ7 269 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 FAM47E-STBD1D6RA91 191 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 ADAP00813 363 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 TYRP1P17643 537 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 PYCR1P32322 319 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 GJA4P35212 333 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 MAGEB1P43366 347 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 OR4C11Q6IEV9 310 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 TUBA3EQ6PEY2 450 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 PARM1Q6UWI2 310 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 ERN2Q76MJ5 926 aaKnown RBP12.54□□□□□ -0.4
USP42-203ENST00000426246 C9orf43Q8TAL5 461 aaPredicted RBP12.54□□□□□ -0.4
USP42-203ENST00000426246 ZNF354BQ96LW1 612 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 ZNF582Q96NG8 517 aaPredicted RBP12.54□□□□□ -0.4
USP42-203ENST00000426246 MYNNQ9NPC7 610 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 TNFRSF10DQ9UBN6 386 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 ASXL3Q9C0F0 2248 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 HNRNPCL2B2RXH8 293 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 POLR2CP19387 275 aaPredicted RBP12.54□□□□□ -0.4
USP42-203ENST00000426246 CXCR2P25025 360 aa12.54□□□□□ -0.4
USP42-203ENST00000426246 RPL4P36578 427 aaKnown RBP12.54□□□□□ -0.4
USP42-203ENST00000426246 FLYWCH1Q4VC44 716 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms