RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 SEMA3DO95025 777 aa12.65□□□□□ -0.38
HDAC6-206ENST00000426196 CSNK2A2P19784 350 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-206ENST00000426196 CFPP27918 469 aa12.65□□□□□ -0.38
HDAC6-206ENST00000426196 ADH6P28332 368 aa12.65□□□□□ -0.38
HDAC6-206ENST00000426196 EVI2BP34910 448 aa12.65□□□□□ -0.38
HDAC6-206ENST00000426196 FEN1P39748 380 aaKnown RBP12.65□□□□□ -0.38
HDAC6-206ENST00000426196 GZMKP49863 264 aa12.65□□□□□ -0.38
HDAC6-206ENST00000426196 EMDP50402 254 aa12.65□□□□□ -0.38
HDAC6-206ENST00000426196 CDH11P55287 796 aa12.65□□□□□ -0.38
HDAC6-206ENST00000426196 GPX6P59796 221 aa12.65□□□□□ -0.38
HDAC6-206ENST00000426196 TAB1Q15750 504 aa12.65□□□□□ -0.38
HDAC6-206ENST00000426196 FAM120AOSQ5T036 256 aa12.65□□□□□ -0.38
HDAC6-206ENST00000426196 FIGNL1Q6PIW4 674 aa12.65□□□□□ -0.38
HDAC6-206ENST00000426196 ZNF619Q8N2I2 560 aa12.65□□□□□ -0.38
HDAC6-206ENST00000426196 TEX9Q8N6V9 391 aa12.65□□□□□ -0.38
HDAC6-206ENST00000426196 TRIM58Q8NG06 486 aa12.65□□□□□ -0.38
HDAC6-206ENST00000426196 OR52B6Q8NGF0 335 aa12.65□□□□□ -0.38
HDAC6-206ENST00000426196 RNF138Q8WVD3 245 aa12.65□□□□□ -0.38
HDAC6-206ENST00000426196 HSD17B8Q92506 261 aa12.65□□□□□ -0.38
HDAC6-206ENST00000426196 FAM168AQ92567 244 aa12.65□□□□□ -0.38
HDAC6-206ENST00000426196 LRRC39Q96DD0 335 aa12.65□□□□□ -0.38
HDAC6-206ENST00000426196 NAP1L3Q99457 506 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-206ENST00000426196 CACNG6Q9BXT2 260 aa12.65□□□□□ -0.38
HDAC6-206ENST00000426196 C12orf49Q9H741 205 aa12.65□□□□□ -0.38
HDAC6-206ENST00000426196 MANSC1Q9H8J5 431 aa12.65□□□□□ -0.38
HDAC6-206ENST00000426196 CAB39LQ9H9S4 337 aa12.65□□□□□ -0.38
HDAC6-206ENST00000426196 SDHAF3Q9NRP4 125 aa12.65□□□□□ -0.38
HDAC6-206ENST00000426196 PAQR5Q9NXK6 330 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-206ENST00000426196 XPR1Q9UBH6 696 aa12.65□□□□□ -0.38
HDAC6-206ENST00000426196 EIF1AYO14602 144 aaKnown RBP12.64□□□□□ -0.39
HDAC6-206ENST00000426196 GUCY1B2O75343 617 aa12.64□□□□□ -0.39
HDAC6-206ENST00000426196 BCAS2O75934 225 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-206ENST00000426196 SYNGR4O95473 234 aa12.64□□□□□ -0.39
HDAC6-206ENST00000426196 KLK1P06870 262 aa12.64□□□□□ -0.39
HDAC6-206ENST00000426196 TUBBP07437 444 aa12.64□□□□□ -0.39
HDAC6-206ENST00000426196 PCSK2P16519 638 aa12.64□□□□□ -0.39
HDAC6-206ENST00000426196 USF1P22415 310 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-206ENST00000426196 FNTAP49354 379 aa12.64□□□□□ -0.39
HDAC6-206ENST00000426196 PNLIPRP2P54317 469 aa12.64□□□□□ -0.39
HDAC6-206ENST00000426196 STX5Q13190 355 aa12.64□□□□□ -0.39
HDAC6-206ENST00000426196 CPSF6Q16630 551 aaKnown RBP eCLIP12.64□□□□□ -0.39
HDAC6-206ENST00000426196 TRMT12Q53H54 448 aaKnown RBP12.64□□□□□ -0.39
HDAC6-206ENST00000426196 SLC48A1Q6P1K1 146 aa12.64□□□□□ -0.39
HDAC6-206ENST00000426196 PAGE2Q7Z2X7 111 aa12.64□□□□□ -0.39
HDAC6-206ENST00000426196 EXOC3L1Q86VI1 746 aa12.64□□□□□ -0.39
HDAC6-206ENST00000426196 ZNF525Q8N782 197 aa12.64□□□□□ -0.39
HDAC6-206ENST00000426196 STAG3L4Q8TBR4 150 aa12.64□□□□□ -0.39
HDAC6-206ENST00000426196 PROX1Q92786 737 aa12.64□□□□□ -0.39
HDAC6-206ENST00000426196 EFHD2Q96C19 240 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-206ENST00000426196 SERPINI1Q99574 410 aa12.64□□□□□ -0.39
HDAC6-206ENST00000426196 ADAM19Q9H013 955 aa12.64□□□□□ -0.39
HDAC6-206ENST00000426196 ALG9Q9H6U8 611 aa12.64□□□□□ -0.39
HDAC6-206ENST00000426196 MED11Q9P086 117 aa12.64□□□□□ -0.39
HDAC6-206ENST00000426196 PSME2Q9UL46 239 aa12.64□□□□□ -0.39
HDAC6-206ENST00000426196 TEX264Q9Y6I9 313 aa12.64□□□□□ -0.39
HDAC6-206ENST00000426196 HEATR1Q9H583 2144 aaKnown RBP12.64□□□□□ -0.39
HDAC6-206ENST00000426196 C1orf226A1L170 272 aa12.63□□□□□ -0.39
HDAC6-206ENST00000426196 FOXE1O00358 373 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-206ENST00000426196 TCF21O43680 179 aa12.63□□□□□ -0.39
HDAC6-206ENST00000426196 UGDHO60701 494 aa12.63□□□□□ -0.39
HDAC6-206ENST00000426196 CSF3P09919 207 aa12.63□□□□□ -0.39
HDAC6-206ENST00000426196 CT45A8P0DMV1 189 aa12.63□□□□□ -0.39
HDAC6-206ENST00000426196 CT45A9P0DMV2 189 aa12.63□□□□□ -0.39
HDAC6-206ENST00000426196 STMN1P16949 149 aa12.63□□□□□ -0.39
HDAC6-206ENST00000426196 AGTR1P30556 359 aa12.63□□□□□ -0.39
HDAC6-206ENST00000426196 MAPK12P53778 367 aa12.63□□□□□ -0.39
HDAC6-206ENST00000426196 CORO7P57737 925 aa12.63□□□□□ -0.39
HDAC6-206ENST00000426196 C21orf58P58505 322 aa12.63□□□□□ -0.39
HDAC6-206ENST00000426196 IRX1P78414 480 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-206ENST00000426196 MRPS35P82673 323 aaKnown RBP12.63□□□□□ -0.39
HDAC6-206ENST00000426196 LSM11P83369 360 aaKnown RBP eCLIP12.63□□□□□ -0.39
HDAC6-206ENST00000426196 RAB35Q15286 201 aa12.63□□□□□ -0.39
HDAC6-206ENST00000426196 LTB4RQ15722 352 aa12.63□□□□□ -0.39
HDAC6-206ENST00000426196 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.63□□□□□ -0.39
HDAC6-206ENST00000426196 GLYR1Q49A26 553 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-206ENST00000426196 CT45A2Q5DJT8 189 aa12.63□□□□□ -0.39
HDAC6-206ENST00000426196 CCNYL2Q5T2Q4 361 aa12.63□□□□□ -0.39
HDAC6-206ENST00000426196 ATG4DQ86TL0 474 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-206ENST00000426196 GGNQ86UU5 652 aa12.63□□□□□ -0.39
HDAC6-206ENST00000426196 RFLNBQ8N5W9 214 aa12.63□□□□□ -0.39
HDAC6-206ENST00000426196 OR10D3Q8NH80 312 aa12.63□□□□□ -0.39
HDAC6-206ENST00000426196 PIWIL2Q8TC59 973 aaKnown RBP12.63□□□□□ -0.39
HDAC6-206ENST00000426196 KISS1RQ969F8 398 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-206ENST00000426196 KLHL29Q96CT2 875 aa12.63□□□□□ -0.39
HDAC6-206ENST00000426196 ZMYND19Q96E35 227 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-206ENST00000426196 C1GALT1C1Q96EU7 318 aa12.63□□□□□ -0.39
HDAC6-206ENST00000426196 USB1Q9BQ65 265 aaKnown RBP12.63□□□□□ -0.39
HDAC6-206ENST00000426196 POTEKPQ9BYX7 375 aa12.63□□□□□ -0.39
HDAC6-206ENST00000426196 DDX47Q9H0S4 455 aaKnown RBP12.63□□□□□ -0.39
HDAC6-206ENST00000426196 C12orf65Q9H3J6 166 aaKnown RBP12.63□□□□□ -0.39
HDAC6-206ENST00000426196 LZTFL1Q9NQ48 299 aa12.63□□□□□ -0.39
HDAC6-206ENST00000426196 FBXO34Q9NWN3 711 aa12.63□□□□□ -0.39
HDAC6-206ENST00000426196 AHSPQ9NZD4 102 aa12.63□□□□□ -0.39
HDAC6-206ENST00000426196 ADAM29Q9UKF5 820 aa12.63□□□□□ -0.39
HDAC6-206ENST00000426196 CES1P1Q9UKY3 287 aa12.63□□□□□ -0.39
HDAC6-206ENST00000426196 MTO1Q9Y2Z2 717 aaKnown RBP12.63□□□□□ -0.39
HDAC6-206ENST00000426196 PCDHA9Q9Y5H5 950 aa12.63□□□□□ -0.39
HDAC6-206ENST00000426196 GOLGA6L10A0A0M3HER8 536 aa12.62□□□□□ -0.39
HDAC6-206ENST00000426196 LOC100289279A0A1B0GTE1 492 aa12.62□□□□□ -0.39
HDAC6-206ENST00000426196 DPRXA6NFQ7 191 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms