RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 RAB35Q15286 201 aa2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 C2orf76Q3KRA6 126 aa2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 TMEM52BQ4KMG9 183 aa2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 ZNF658Q5TYW1 1059 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 DMKNQ6E0U4 476 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 RAB12Q6IQ22 244 aa2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 CNSTQ6PJW8 725 aa2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 IGFL2Q6UWQ7 119 aa2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 MCOLN2Q8IZK6 566 aa2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 TEX9Q8N6V9 391 aa2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 SPC24Q8NBT2 197 aa2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 WDR36Q8NI36 951 aaKnown RBP2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 URGCPQ8TCY9 931 aa2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 CCDC47Q96A33 483 aaKnown RBP2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 C18orf25Q96B23 403 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 C16orf74Q96GX8 76 aa2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 MAGEB18Q96M61 343 aa2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 ZNF285Q96NJ3 590 aa2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 TSGA13Q96PP4 275 aa2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 ACAT2Q9BWD1 397 aa2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 DDX47Q9H0S4 455 aaKnown RBP2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 FETUBQ9UGM5 382 aa2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 DUSP12Q9UNI6 340 aa2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 FLVCR1Q9Y5Y0 555 aa2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 FKBP7Q9Y680 259 aa2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 TRBV2A0A0J9YWF9 115 aa2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 NPIPA2E9PIF3 369 aa2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 ZNF861PO60384 105 aa2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 KERAO60938 352 aa2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 B3GALNT1O75752 331 aa2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 SERF1AO75920 110 aa2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 PNPP00491 289 aa2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 CXCL10P02778 98 aa2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 PRDX6P30041 224 aa2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 MAGEA4P43358 317 aa2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 OR3A4PP47883 348 aa2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 P2RY4P51582 365 aa2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 DIO3P55073 304 aa2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 SSTP61278 116 aa2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 NOP14P78316 857 aaKnown RBP2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 PRR4Q16378 134 aa2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 PAGE2BQ5JRK9 111 aa2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 WSCD1Q658N2 575 aa2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 LEG1Q6P5S2 330 aa2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 ZNF562Q6V9R5 426 aa2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 CENPSQ8N2Z9 138 aa2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 ARL6IP6Q8N6S5 226 aa2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 ADIPOR1Q96A54 375 aa2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 NOL4LQ96MY1 436 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 ATP6V0BQ99437 205 aa2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 CARD6Q9BX69 1037 aa2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 ELOVL2Q9NXB9 296 aa2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 TBK1Q9UHD2 729 aa2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 DNPEPQ9ULA0 475 aa2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 ODF2LQ9ULJ1 636 aa2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 DHRS7Q9Y394 339 aa2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 MTF2Q9Y483 593 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 MEGF6O75095 1541 aa2.96□□□□□ -1.94
HMGB1P49-201ENST00000418882 GTF3C1Q12789 2109 aa2.95□□□□□ -1.94
HMGB1P49-201ENST00000418882 FBLL1A6NHQ2 334 aaKnown RBP2.95□□□□□ -1.94
HMGB1P49-201ENST00000418882 H0YL77 283 aa2.95□□□□□ -1.94
HMGB1P49-201ENST00000418882 TM9SF1O15321 606 aa2.95□□□□□ -1.94
HMGB1P49-201ENST00000418882 HSF2BPO75031 334 aa2.95□□□□□ -1.94
HMGB1P49-201ENST00000418882 ZNF254O75437 659 aa2.95□□□□□ -1.94
HMGB1P49-201ENST00000418882 STAM2O75886 525 aa2.95□□□□□ -1.94
HMGB1P49-201ENST00000418882 LIM2P55344 173 aa2.95□□□□□ -1.94
HMGB1P49-201ENST00000418882 ARF5P84085 180 aa2.95□□□□□ -1.94
HMGB1P49-201ENST00000418882 FUT7Q11130 342 aa2.95□□□□□ -1.94
HMGB1P49-201ENST00000418882 NME3Q13232 169 aa2.95□□□□□ -1.94
HMGB1P49-201ENST00000418882 DPYSL3Q14195 570 aa2.95□□□□□ -1.94
HMGB1P49-201ENST00000418882 CAMK4Q16566 473 aa2.95□□□□□ -1.94
HMGB1P49-201ENST00000418882 CARTPTQ16568 116 aa2.95□□□□□ -1.94
HMGB1P49-201ENST00000418882 PARP6Q2NL67 630 aa2.95□□□□□ -1.94
HMGB1P49-201ENST00000418882 SLC39A4Q6P5W5 647 aa2.95□□□□□ -1.94
HMGB1P49-201ENST00000418882 SCARA5Q6ZMJ2 495 aa2.95□□□□□ -1.94
HMGB1P49-201ENST00000418882 GOLGA7Q7Z5G4 137 aa2.95□□□□□ -1.94
HMGB1P49-201ENST00000418882 CSNK1A1LQ8N752 337 aa2.95□□□□□ -1.94
HMGB1P49-201ENST00000418882 CCNYQ8ND76 341 aa2.95□□□□□ -1.94
HMGB1P49-201ENST00000418882 EEF2KMTQ96G04 330 aa2.95□□□□□ -1.94
HMGB1P49-201ENST00000418882 DHTKD1Q96HY7 919 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P49-201ENST00000418882 HES7Q9BYE0 225 aa2.95□□□□□ -1.94
HMGB1P49-201ENST00000418882 IL20RAQ9UHF4 553 aa2.95□□□□□ -1.94
HMGB1P49-201ENST00000418882 PRO0461Q9UI25 63 aa2.95□□□□□ -1.94
HMGB1P49-201ENST00000418882 BLOC1S6Q9UL45 172 aa2.95□□□□□ -1.94
HMGB1P49-201ENST00000418882 EXOSC1Q9Y3B2 195 aaKnown RBP2.95□□□□□ -1.94
HMGB1P49-201ENST00000418882 ATP6V0A2Q9Y487 856 aa2.95□□□□□ -1.94
HMGB1P49-201ENST00000418882 DDX39AO00148 427 aaKnown RBP2.94□□□□□ -1.94
HMGB1P49-201ENST00000418882 PGK1P00558 417 aa2.94□□□□□ -1.94
HMGB1P49-201ENST00000418882 JCHAINP01591 159 aa2.94□□□□□ -1.94
HMGB1P49-201ENST00000418882 PRB2P02812 416 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P49-201ENST00000418882 IGFBP1P08833 259 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P49-201ENST00000418882 AHCYP23526 432 aa2.94□□□□□ -1.94
HMGB1P49-201ENST00000418882 KIF5BP33176 963 aa2.94□□□□□ -1.94
HMGB1P49-201ENST00000418882 RIPK4P57078 832 aa2.94□□□□□ -1.94
HMGB1P49-201ENST00000418882 MRPS6P82932 125 aaKnown RBP2.94□□□□□ -1.94
HMGB1P49-201ENST00000418882 OVGP1Q12889 678 aa2.94□□□□□ -1.94
HMGB1P49-201ENST00000418882 BEND6Q5SZJ8 279 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P49-201ENST00000418882 FAM159AQ6UWV7 190 aa2.94□□□□□ -1.94
HMGB1P49-201ENST00000418882 CXCL17Q6UXB2 119 aa2.94□□□□□ -1.94
HMGB1P49-201ENST00000418882 WDR88Q6ZMY6 472 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms