RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 DCST2Q5T1A1 773 aa18.75■□□□□ 0.59
USP39-204ENST00000409766 MFSD4BQ5TF39 518 aa18.75■□□□□ 0.59
USP39-204ENST00000409766 ACSM5Q6NUN0 579 aa18.75■□□□□ 0.59
USP39-204ENST00000409766 ZNF730Q6ZMV8 503 aa18.75■□□□□ 0.59
USP39-204ENST00000409766 FAM26EQ8N5C1 309 aa18.75■□□□□ 0.59
USP39-204ENST00000409766 PIK3R3Q92569 461 aa18.75■□□□□ 0.59
USP39-204ENST00000409766 ALOXE3Q9BYJ1 711 aa18.75■□□□□ 0.59
USP39-204ENST00000409766 UCK1Q9HA47 277 aa18.75■□□□□ 0.59
USP39-204ENST00000409766 CACYBPQ9HB71 228 aaKnown RBP18.75■□□□□ 0.59
USP39-204ENST00000409766 FAM170BA6NMN3 283 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 AIREO43918 545 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 PRKYO43930 277 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 STX11O75558 287 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 NTN1O95631 604 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 SLC35E2P0CK97 266 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 CAPZBP47756 277 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 OMPP47874 163 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 PCYT1AP49585 367 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 TSPAN31Q12999 210 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 GPR68Q15743 365 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 MAPK14Q16539 360 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 C11orf91Q3C1V1 193 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 ANKDD1AQ495B1 522 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 SLC25A30Q5SVS4 291 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 PLEKHM3Q6ZWE6 761 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 ZNF367Q7RTV3 350 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 MEX3DQ86XN8 651 aaKnown RBP18.74■□□□□ 0.59
USP39-204ENST00000409766 GKN2Q86XP6 184 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 NKAIN4Q8IVV8 208 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 ZNF619Q8N2I2 560 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 SLC15A4Q8N697 577 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 LMX1AQ8TE12 382 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 MAP3K3Q99759 626 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 PLA2G12AQ9BZM1 189 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 THADAQ6YHU6 1953 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 SRPX2O60687 465 aaPredicted RBP18.74■□□□□ 0.59
USP39-204ENST00000409766 OR5F1O95221 314 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 MED26O95402 600 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 GADD45AP24522 165 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 TGFBR1P36897 503 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 ZNF136P52737 540 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 DECR1Q16698 335 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 DGUOKQ16854 277 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 ARMCX4Q5H9R4 360 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 MEDAGQ5VYS4 303 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 LINC00299Q6ZSB3 139 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 GDF7Q7Z4P5 450 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 BCDIN3DQ7Z5W3 292 aaKnown RBP18.74■□□□□ 0.59
USP39-204ENST00000409766 COX18Q8N8Q8 333 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 CADM4Q8NFZ8 388 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 ACOT11Q8WXI4 607 aaPredicted RBP18.74■□□□□ 0.59
USP39-204ENST00000409766 FGF11Q92914 225 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 VMP1Q96GC9 406 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 FOXQ1Q9C009 403 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 EGLN3Q9H6Z9 239 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 FBXO34Q9NWN3 711 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 MRPS17Q9Y2R5 130 aaKnown RBP18.74■□□□□ 0.59
USP39-204ENST00000409766 RPL36Q9Y3U8 105 aaKnown RBP18.74■□□□□ 0.59
USP39-204ENST00000409766 PMF1-BGLAPU3KQ54 211 aa18.74■□□□□ 0.59
USP39-204ENST00000409766 TLX2O43763 284 aaPredicted RBP18.73■□□□□ 0.59
USP39-204ENST00000409766 OPRL1P41146 370 aa18.73■□□□□ 0.59
USP39-204ENST00000409766 RGS6P49758 472 aa18.73■□□□□ 0.59
USP39-204ENST00000409766 RGS19P49795 217 aa18.73■□□□□ 0.59
USP39-204ENST00000409766 SMSP52788 366 aa18.73■□□□□ 0.59
USP39-204ENST00000409766 C21orf59P57076 290 aa18.73■□□□□ 0.59
USP39-204ENST00000409766 RACK1P63244 317 aaKnown RBP18.73■□□□□ 0.59
USP39-204ENST00000409766 EIPR1Q53HC9 387 aa18.73■□□□□ 0.59
USP39-204ENST00000409766 DGAT2L6Q6ZPD8 337 aa18.73■□□□□ 0.59
USP39-204ENST00000409766 GPR151Q8TDV0 419 aa18.73■□□□□ 0.59
USP39-204ENST00000409766 TCTN2Q96GX1 697 aa18.73■□□□□ 0.59
USP39-204ENST00000409766 SLC41A3Q96GZ6 507 aa18.73■□□□□ 0.59
USP39-204ENST00000409766 SH3YL1Q96HL8 342 aaPredicted RBP18.73■□□□□ 0.59
USP39-204ENST00000409766 OR5M11Q96RB7 305 aa18.73■□□□□ 0.59
USP39-204ENST00000409766 PCED1AQ9H1Q7 454 aa18.73■□□□□ 0.59
USP39-204ENST00000409766 CNIH4Q9P003 139 aa18.73■□□□□ 0.59
USP39-204ENST00000409766 KCNE5Q9UJ90 142 aa18.73■□□□□ 0.59
USP39-204ENST00000409766 DOLKQ9UPQ8 538 aa18.73■□□□□ 0.59
USP39-204ENST00000409766 CORINQ9Y5Q5 1042 aa18.73■□□□□ 0.59
USP39-204ENST00000409766 A0A0A6YYC8 382 aaPredicted RBP18.73■□□□□ 0.59
USP39-204ENST00000409766 LILRA5A6NI73 299 aa18.73■□□□□ 0.59
USP39-204ENST00000409766 I3L1I5 382 aaPredicted RBP18.73■□□□□ 0.59
USP39-204ENST00000409766 KIAA0513O60268 411 aa18.73■□□□□ 0.59
USP39-204ENST00000409766 NADKO95544 446 aaPredicted RBP18.73■□□□□ 0.59
USP39-204ENST00000409766 DBIP07108 87 aaKnown RBP18.73■□□□□ 0.59
USP39-204ENST00000409766 PROS1P07225 676 aa18.73■□□□□ 0.59
USP39-204ENST00000409766 DBTP11182 482 aaKnown RBP18.73■□□□□ 0.59
USP39-204ENST00000409766 ZNF91Q05481 1191 aa18.73■□□□□ 0.59
USP39-204ENST00000409766 NCF4Q15080 339 aa18.73■□□□□ 0.59
USP39-204ENST00000409766 RASSF6Q6ZTQ3 369 aa18.73■□□□□ 0.59
USP39-204ENST00000409766 RRM2BQ7LG56 351 aa18.73■□□□□ 0.59
USP39-204ENST00000409766 ARHGAP22Q7Z5H3 698 aa18.73■□□□□ 0.59
USP39-204ENST00000409766 MRGPREQ86SM8 312 aa18.73■□□□□ 0.59
USP39-204ENST00000409766 TOR1AIP2Q8NFQ8 470 aa18.73■□□□□ 0.59
USP39-204ENST00000409766 HOXB13Q92826 284 aaPredicted RBP18.73■□□□□ 0.59
USP39-204ENST00000409766 ZHX1-C8orf76Q96EF9 292 aa18.73■□□□□ 0.59
USP39-204ENST00000409766 HSPBAP1Q96EW2 488 aa18.73■□□□□ 0.59
USP39-204ENST00000409766 FAM46AQ96IP4 442 aaKnown RBP18.73■□□□□ 0.59
USP39-204ENST00000409766 PLEKHA8Q96JA3 519 aa18.73■□□□□ 0.59
USP39-204ENST00000409766 OSGIN1Q9UJX0 560 aa18.73■□□□□ 0.59
USP39-204ENST00000409766 SPTBP11277 2137 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms