RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 HGFACQ04756 655 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 SLC10A7Q0GE19 358 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 SLC10A2Q12908 348 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 DYRK1AQ13627 763 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 NCF4Q15080 339 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 CCDC6Q16204 474 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 SSX2Q16385 188 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 FAM83EQ2M2I3 478 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 CTU2Q2VPK5 515 aaKnown RBP4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 PCID2Q5JVF3 399 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 LCE4AQ5TA78 99 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 PRAMEF5Q5TYX0 476 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 PRAMEF6Q5VXH4 476 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 ASPHD2Q6ICH7 369 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 TCEAL6Q6IPX3 200 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 TTC23LQ6PF05 361 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 GDPD4Q6W3E5 623 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 LEKR1Q6ZMV7 388 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 ZNF704Q6ZNC4 412 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 TRIM74Q86UV6 250 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 TRIM73Q86UV7 250 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 TP53INP2Q8IXH6 220 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 RCOR2Q8IZ40 523 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 ADGRG5Q8IZF4 528 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 RNF10Q8N5U6 811 aaKnown RBP4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 DEFB119Q8N690 84 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 LRRC57Q8N9N7 239 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 CCDC112Q8NEF3 446 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 NUDT10Q8NFP7 164 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 LKAAEAR1Q8TD35 194 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 PDCD6IPQ8WUM4 868 aaKnown RBP4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 TCEAL3Q969E4 200 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 R3HDM4Q96D70 268 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 ECHDC3Q96DC8 303 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 NUDT11Q96G61 164 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 OLFM3Q96PB7 478 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 PRR25Q96S07 402 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 RAB40CQ96S21 281 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 RASL10BQ96S79 203 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 FAM110AQ9BQ89 295 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 TRMOQ9BU70 441 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 CALN1Q9BXU9 219 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 AMBRA1Q9C0C7 1298 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 WWP1Q9H0M0 922 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 ZDHHC6Q9H6R6 413 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 AUNIPQ9H7T9 357 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 DNAJC4Q9NNZ3 241 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 TMEM9BQ9NQ34 198 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 DYRK4Q9NR20 520 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 STX18Q9P2W9 335 aaKnown RBP4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 COPS7AQ9UBW8 275 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 TFR2Q9UP52 801 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 ZFR2Q9UPR6 939 aaKnown RBP4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 PPIL1Q9Y3C6 166 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 FADS3Q9Y5Q0 445 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 SLCO1B1Q9Y6L6 691 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 DUSP10Q9Y6W6 482 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 ATXN2Q99700 1313 aaKnown RBP4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 PLXNB3Q9ULL4 1909 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 ACACAQ13085 2346 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 AKAP13Q12802 2813 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 MAP1BP46821 2468 aaKnown RBP4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 hCG_1818297A0A087WSY0 165 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 FAM240BA0A1B0GVZ2 78 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 A0A1W2PQ67 120 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 TMEM129A0AVI4 362 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 OR6C65A6NJZ3 312 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 PRR23D1E9PI22 279 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 PRAMEF26H0Y7S4 382 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 ABCD4O14678 606 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 INSIG1O15503 277 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 ZW10O43264 779 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 TRIAP1O43715 76 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 MFSD11O43934 449 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 FCMRO60667 390 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 GMNNO75496 209 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 TM7SF2O76062 418 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 OPN1LWP04000 364 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 WNT1P04628 370 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 FESP07332 822 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 CSN3P07498 182 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 NUDT17P0C025 328 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 PRR23D2P0DMB1 279 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 PRKAR1AP10644 381 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 ETFAP13804 333 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 CCNB1P14635 433 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 ZNF24P17028 368 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 PRKACAP17612 351 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 SRMP19623 302 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 PTNP21246 168 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 CSRP1P21291 193 aaKnown RBP4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 ELAVL4P26378 380 aaKnown RBP4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 HTR2AP28223 471 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 CD38P28907 300 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 PRDX2P32119 198 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 RPS5P46782 204 aaKnown RBP4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 OR3A1P47881 315 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 DNA2P51530 1060 aa4.97□□□□□ -1.61
HMGB3P7-201ENST00000400214 ARHGDIBP52566 201 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms