RNA–Protein interactions for RNA: ENST00000391014.1

RNU6-1228P-201, Transcript of RNA, U6 small nuclear 1228, pseudogene, humanhuman

BASIC

Gene RNU6-1228P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1228P-201ENST00000391014 TRAF3IP1Q8TDR0 691 aaPredicted RBP0.53□□□□□ -2.32
RNU6-1228P-201ENST00000391014 UBLCP1Q8WVY7 318 aaPredicted RBP0.53□□□□□ -2.32
RNU6-1228P-201ENST00000391014 FRZBQ92765 325 aa0.53□□□□□ -2.32
RNU6-1228P-201ENST00000391014 CXorf58Q96LI9 332 aa0.53□□□□□ -2.32
RNU6-1228P-201ENST00000391014 CPXM1Q96SM3 734 aa0.53□□□□□ -2.32
RNU6-1228P-201ENST00000391014 FUT8Q9BYC5 575 aa0.53□□□□□ -2.32
RNU6-1228P-201ENST00000391014 GPR61Q9BZJ8 451 aa0.53□□□□□ -2.32
RNU6-1228P-201ENST00000391014 ULBP2Q9BZM5 246 aa0.53□□□□□ -2.32
RNU6-1228P-201ENST00000391014 ABCG8Q9H221 673 aa0.53□□□□□ -2.32
RNU6-1228P-201ENST00000391014 SLC26A1Q9H2B4 701 aa0.53□□□□□ -2.32
RNU6-1228P-201ENST00000391014 PFDN4Q9NQP4 134 aa0.53□□□□□ -2.32
RNU6-1228P-201ENST00000391014 TRPC4Q9UBN4 977 aa0.53□□□□□ -2.32
RNU6-1228P-201ENST00000391014 IFT52Q9Y366 437 aa0.53□□□□□ -2.32
RNU6-1228P-201ENST00000391014 SAMHD1Q9Y3Z3 626 aaKnown RBP0.53□□□□□ -2.32
RNU6-1228P-201ENST00000391014 CCL27Q9Y4X3 112 aa0.53□□□□□ -2.32
RNU6-1228P-201ENST00000391014 IGHV3-64DA0A0J9YX35 117 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 A8MUA0 341 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 J3QKU1 62 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 SH2D1BO14796 132 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 B4GALT5O43286 388 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 IGHV3-48P01763 117 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 GSTA1P08263 222 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 CCDC175P0C221 793 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 OR8U8P0C7N1 319 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 PNMA6AP0CW24 399 aaPredicted RBP0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 TPBGLP0DKB5 382 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 CT45A8P0DMV1 189 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 CT45A9P0DMV2 189 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 THRBP10828 461 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 PAX3P23760 479 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 PTAFRP25105 342 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 CCND3P30281 292 aaPredicted RBP0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 OTX2P32243 289 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 SOAT1P35610 550 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 KCNJ1P48048 391 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 IL9RQ01113 521 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 MAP2K1Q02750 393 aaPredicted RBP0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 UBXN1Q04323 297 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 FAM83EQ2M2I3 478 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 HKDC1Q2TB90 917 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 KRTAP21-3Q3LHN1 58 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 EPC2Q52LR7 807 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 CT45A2Q5DJT8 189 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 HYIQ5T013 277 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 PRR5LQ6MZQ0 368 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 ATRAIDQ6UW56 229 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 ASRGL1Q7L266 308 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 SPATA19Q7Z5L4 167 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 TSEN54Q7Z6J9 526 aaKnown RBP0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 ASPGQ86U10 573 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 LINC00304Q8N9R0 145 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 OR52J3Q8NH60 311 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 KIF18AQ8NI77 898 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 IL1F10Q8WWZ1 152 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 UCN3Q969E3 161 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 EXOSC8Q96B26 276 aaKnown RBP0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 MRPL53Q96EL3 112 aaKnown RBP0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 SLF1Q9BQI6 1058 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 NTMT1Q9BV86 223 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 TPK1Q9H3S4 243 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 ZDHHC6Q9H6R6 413 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 SAMSN1Q9NSI8 373 aaKnown RBP0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 SLCO1C1Q9NYB5 712 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 LHX3Q9UBR4 397 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 DIMT1Q9UNQ2 313 aaKnown RBP0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 USP6P35125 1406 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 PLA2R1Q13018 1463 aa0.52□□□□□ -2.33
RNU6-1228P-201ENST00000391014 FAM149AA5PLN7 773 aa0.51□□□□□ -2.33
RNU6-1228P-201ENST00000391014 GJE1A6NN92 205 aa0.51□□□□□ -2.33
RNU6-1228P-201ENST00000391014 YDJCA8MPS7 323 aa0.51□□□□□ -2.33
RNU6-1228P-201ENST00000391014 C11orf94C9JXX5 98 aa0.51□□□□□ -2.33
RNU6-1228P-201ENST00000391014 CFLARO15519 480 aa0.51□□□□□ -2.33
RNU6-1228P-201ENST00000391014 EFNA2O43921 213 aa0.51□□□□□ -2.33
RNU6-1228P-201ENST00000391014 SCRG1O75711 98 aa0.51□□□□□ -2.33
RNU6-1228P-201ENST00000391014 REC8O95072 547 aa0.51□□□□□ -2.33
RNU6-1228P-201ENST00000391014 SDC1P18827 310 aa0.51□□□□□ -2.33
RNU6-1228P-201ENST00000391014 HPDP32754 393 aaPredicted RBP0.51□□□□□ -2.33
RNU6-1228P-201ENST00000391014 RPL4P36578 427 aaKnown RBP0.51□□□□□ -2.33
RNU6-1228P-201ENST00000391014 TNFSF10P50591 281 aa0.51□□□□□ -2.33
RNU6-1228P-201ENST00000391014 APOC4P55056 127 aa0.51□□□□□ -2.33
RNU6-1228P-201ENST00000391014 RAG2P55895 527 aa0.51□□□□□ -2.33
RNU6-1228P-201ENST00000391014 SLC34A1Q06495 639 aa0.51□□□□□ -2.33
RNU6-1228P-201ENST00000391014 ARFRP1Q13795 201 aa0.51□□□□□ -2.33
RNU6-1228P-201ENST00000391014 NFE2L1Q14494 772 aa0.51□□□□□ -2.33
RNU6-1228P-201ENST00000391014 NSDHLQ15738 373 aa0.51□□□□□ -2.33
RNU6-1228P-201ENST00000391014 TAF9Q16594 264 aa0.51□□□□□ -2.33
RNU6-1228P-201ENST00000391014 DEFB116Q30KQ4 102 aa0.51□□□□□ -2.33
RNU6-1228P-201ENST00000391014 DNAJC21Q5F1R6 531 aaKnown RBP0.51□□□□□ -2.33
RNU6-1228P-201ENST00000391014 TCP11X2Q5H9J9 407 aa0.51□□□□□ -2.33
RNU6-1228P-201ENST00000391014 DNLZQ5SXM8 178 aa0.51□□□□□ -2.33
RNU6-1228P-201ENST00000391014 CFAP58Q5T655 872 aa0.51□□□□□ -2.33
RNU6-1228P-201ENST00000391014 NANOGP8Q6NSW7 305 aa0.51□□□□□ -2.33
RNU6-1228P-201ENST00000391014 RPUSD3Q6P087 351 aaKnown RBP0.51□□□□□ -2.33
RNU6-1228P-201ENST00000391014 Q6ZS52 159 aa0.51□□□□□ -2.33
RNU6-1228P-201ENST00000391014 C6orf120Q7Z4R8 191 aa0.51□□□□□ -2.33
RNU6-1228P-201ENST00000391014 COL27A1Q8IZC6 1860 aaPredicted RBP0.51□□□□□ -2.33
RNU6-1228P-201ENST00000391014 THEM5Q8N1Q8 247 aa0.51□□□□□ -2.33
RNU6-1228P-201ENST00000391014 OR4F17Q8NGA8 305 aa0.51□□□□□ -2.33
RNU6-1228P-201ENST00000391014 OR10G2Q8NGC3 310 aa0.51□□□□□ -2.33
RNU6-1228P-201ENST00000391014 TMEM158Q8WZ71 300 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms