RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 KPNA4O00629 521 aaPredicted RBP8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 AIREO43918 545 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 KIAA0513O60268 411 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 MAN1A2O60476 641 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 PRAMEF2O60811 474 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 CTSVO60911 334 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 SCG5P05408 212 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 CYC1P08574 325 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 PNLIPP16233 465 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 MYL12AP19105 171 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 DRD5P21918 477 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 CDH3P22223 829 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 CFL1P23528 166 aaKnown RBP8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 S100A5P33763 92 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 CNR2P34972 360 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 ADH7P40394 386 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 RGS6P49758 472 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 POU6F2P78424 691 aaPredicted RBP8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 GPLD1P80108 840 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 BNC1Q01954 994 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 BDH1Q02338 343 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 CHRNEQ04844 493 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 MLLT11Q13015 90 aaPredicted RBP8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 RUNX2Q13950 521 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 GANABQ14697 944 aaKnown RBP8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 GRM7Q14831 915 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 PRICKLE4Q2TBC4 344 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 LEXMQ3ZCV2 418 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 WDR45BQ5MNZ6 344 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 PLA2G2CQ5R387 149 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 LCE2AQ5TA79 106 aaPredicted RBP8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 PODNL1Q6PEZ8 512 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 ZNF730Q6ZMV8 503 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 TMPRSS11FQ6ZWK6 438 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 ARHGAP22Q7Z5H3 698 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 ZER1Q7Z7L7 766 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 ADCK1Q86TW2 530 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 LACC1Q8IV20 430 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 GID4Q8IVV7 300 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 UBALD2Q8IYN6 164 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 MMP21Q8N119 569 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 SLC22A18ASQ8N1D0 253 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 CA13Q8N1Q1 262 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 VWA5B2Q8N398 1253 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 LSMEM1Q8N8F7 131 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 COX18Q8N8Q8 333 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 FLCNQ8NFG4 579 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 B3GNT7Q8NFL0 401 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 OR9Q2Q8NGE9 314 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 OR6T1Q8NGN1 323 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 OR9A2Q8NGT5 310 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 TMEM163Q8TC26 289 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 FNDC8Q8TC99 324 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 DYNC2LI1Q8TCX1 351 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 SLC2A12Q8TD20 617 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 BRIX1Q8TDN6 353 aaKnown RBP8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 DIO2Q92813 273 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 GTPBP3Q969Y2 492 aaKnown RBP8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 SLC35A4Q96G79 324 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 MRPL48Q96GC5 212 aaKnown RBP8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 ABHD8Q96I13 439 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 ART5Q96L15 291 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 GPR174Q9BXC1 333 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 SLC19A3Q9BZV2 496 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 C6orf106Q9H6K1 298 aaPredicted RBP8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 UBE2ZQ9H832 354 aaPredicted RBP8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 LMAN1LQ9HAT1 526 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 TMEM27Q9HBJ8 222 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 PDE7BQ9NP56 450 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 SEMA5BQ9P283 1151 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 CRNNQ9UBG3 495 aaPredicted RBP8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 OSGIN1Q9UJX0 560 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 PNMA8BQ9ULN7 279 aaPredicted RBP8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 CLCA2Q9UQC9 943 aa8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 ZNF443Q9Y2A4 671 aaPredicted RBP8.14□□□□□ -1.11
SNRNP40-202ENST00000373720 A0A087WUU8 490 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 A0A1W2PR77 199 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 PRAMEF27A3QJZ7 478 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 EFCAB7A8K855 629 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 H0Y8X5 98 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 J3KTA2 159 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 POLR1CO15160 346 aaPredicted RBP8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 YKT6O15498 198 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 NUDT21O43809 227 aaKnown RBP8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 BRINP1O60477 761 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 PPM1BO75688 479 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 ZBTB11O95625 1053 aaPredicted RBP8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 RAB36O95755 333 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 EML2O95834 649 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 PROS1P07225 676 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 ACP2P11117 423 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 ZNF182P17025 639 aaPredicted RBP8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 BMP7P18075 431 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 CD72P21854 359 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 MMP11P24347 488 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 TRHRP34981 398 aaPredicted RBP8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 STT3AP46977 705 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 CTBP2P56545 445 aa8.13□□□□□ -1.11
SNRNP40-202ENST00000373720 RPS26P62854 115 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms