RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 TAC1P20366 129 aa9.35□□□□□ -0.91
CLRN3-201ENST00000368671 HSD3B2P26439 372 aa9.35□□□□□ -0.91
CLRN3-201ENST00000368671 HTR6P50406 440 aa9.35□□□□□ -0.91
CLRN3-201ENST00000368671 PNLIPRP2P54317 469 aa9.35□□□□□ -0.91
CLRN3-201ENST00000368671 DSCR4P56555 118 aaPredicted RBP9.35□□□□□ -0.91
CLRN3-201ENST00000368671 RAE1P78406 368 aaKnown RBP9.35□□□□□ -0.91
CLRN3-201ENST00000368671 BTKQ06187 659 aa9.35□□□□□ -0.91
CLRN3-201ENST00000368671 ZNF155Q12901 538 aaPredicted RBP9.35□□□□□ -0.91
CLRN3-201ENST00000368671 STX5Q13190 355 aa9.35□□□□□ -0.91
CLRN3-201ENST00000368671 RASA2Q15283 850 aa9.35□□□□□ -0.91
CLRN3-201ENST00000368671 UNC50Q53HI1 259 aa9.35□□□□□ -0.91
CLRN3-201ENST00000368671 ZNF678Q5SXM1 525 aa9.35□□□□□ -0.91
CLRN3-201ENST00000368671 RAET1LQ5VY80 246 aa9.35□□□□□ -0.91
CLRN3-201ENST00000368671 SHEQ5VZ18 495 aa9.35□□□□□ -0.91
CLRN3-201ENST00000368671 CLEC9AQ6UXN8 241 aa9.35□□□□□ -0.91
CLRN3-201ENST00000368671 GPRIN3Q6ZVF9 776 aa9.35□□□□□ -0.91
CLRN3-201ENST00000368671 CXorf67Q86X51 503 aaPredicted RBP9.35□□□□□ -0.91
CLRN3-201ENST00000368671 RELL1Q8IUW5 271 aa9.35□□□□□ -0.91
CLRN3-201ENST00000368671 P3H2Q8IVL5 708 aa9.35□□□□□ -0.91
CLRN3-201ENST00000368671 GBP7Q8N8V2 638 aaPredicted RBP9.35□□□□□ -0.91
CLRN3-201ENST00000368671 OR7G2Q8NG99 324 aa9.35□□□□□ -0.91
CLRN3-201ENST00000368671 CDC26Q8NHZ8 85 aa9.35□□□□□ -0.91
CLRN3-201ENST00000368671 METTL6Q8TCB7 284 aa9.35□□□□□ -0.91
CLRN3-201ENST00000368671 C16orf78Q8WTQ4 265 aa9.35□□□□□ -0.91
CLRN3-201ENST00000368671 IFT81Q8WYA0 676 aa9.35□□□□□ -0.91
CLRN3-201ENST00000368671 PIK3IP1Q96FE7 263 aa9.35□□□□□ -0.91
CLRN3-201ENST00000368671 APIPQ96GX9 242 aa9.35□□□□□ -0.91
CLRN3-201ENST00000368671 VSTM2LQ96N03 204 aa9.35□□□□□ -0.91
CLRN3-201ENST00000368671 TMEM237Q96Q45 408 aa9.35□□□□□ -0.91
CLRN3-201ENST00000368671 C1QTNF3Q9BXJ4 246 aa9.35□□□□□ -0.91
CLRN3-201ENST00000368671 ACPTQ9BZG2 426 aa9.35□□□□□ -0.91
CLRN3-201ENST00000368671 OPN3Q9H1Y3 402 aaPredicted RBP9.35□□□□□ -0.91
CLRN3-201ENST00000368671 DSN1Q9H410 356 aa9.35□□□□□ -0.91
CLRN3-201ENST00000368671 MRPS18CQ9Y3D5 142 aaKnown RBP9.35□□□□□ -0.91
CLRN3-201ENST00000368671 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.35□□□□□ -0.91
CLRN3-201ENST00000368671 SLC22A20A6NK97 555 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 H3BML4 177 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 MSTNO14793 375 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 SEC14L5O43304 696 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 ARHGEF9O43307 516 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 ZIC3O60481 467 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 SMPD2O60906 423 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 ULK1O75385 1050 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 CTAGE8P0CG41 777 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 PEPDP12955 493 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 POU2F1P14859 743 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 TIA1P31483 386 aaKnown RBP eCLIP9.34□□□□□ -0.91
CLRN3-201ENST00000368671 EVI2BP34910 448 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 GAS1P54826 345 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 B3GALT5-AS1P59052 145 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 MRPS22P82650 360 aaKnown RBP9.34□□□□□ -0.91
CLRN3-201ENST00000368671 ACSM2AQ08AH3 577 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 HEPACAMQ14CZ8 416 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 SPIN4Q56A73 249 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 Q5PR19 223 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 ACSM2BQ68CK6 577 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 OR2A2Q6IF42 318 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 BTLAQ7Z6A9 289 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 CTAGE4Q8IX94 777 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 SAMD14Q8IZD0 417 aaPredicted RBP9.34□□□□□ -0.91
CLRN3-201ENST00000368671 TMEM151AQ8N4L1 468 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 OR2M3Q8NG83 312 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 OR5M1Q8NGP8 315 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 FIG4Q92562 907 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 ERP27Q96DN0 273 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 STARD4Q96DR4 205 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 PGM2Q96G03 612 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 ZC3HAV1LQ96H79 300 aaKnown RBP9.34□□□□□ -0.91
CLRN3-201ENST00000368671 WFIKKN1Q96NZ8 548 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 BBS4Q96RK4 519 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 ZNF382Q96SR6 550 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 FMO2Q99518 471 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 PINK1Q9BXM7 581 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 UBTD1Q9HAC8 227 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 SLC35C2Q9NQQ7 365 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 ZNF226Q9NYT6 803 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 TAS2R9Q9NYW1 312 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 FLRT3Q9NZU0 649 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 MED11Q9P086 117 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 TMEM216Q9P0N5 145 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 ZNF180Q9UJW8 692 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 TIMM22Q9Y584 194 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 MED12LQ86YW9 2145 aa9.34□□□□□ -0.91
CLRN3-201ENST00000368671 ZNF469Q96JG9 3925 aaPredicted RBP9.33□□□□□ -0.92
CLRN3-201ENST00000368671 A0A087WUV0 522 aaPredicted RBP9.33□□□□□ -0.92
CLRN3-201ENST00000368671 H0YC42 278 aa9.33□□□□□ -0.92
CLRN3-201ENST00000368671 CTIFO43310 598 aaKnown RBP9.33□□□□□ -0.92
CLRN3-201ENST00000368671 GMFGO60234 142 aa9.33□□□□□ -0.92
CLRN3-201ENST00000368671 DLX3O60479 287 aa9.33□□□□□ -0.92
CLRN3-201ENST00000368671 COQ9O75208 318 aa9.33□□□□□ -0.92
CLRN3-201ENST00000368671 URI1O94763 535 aaPredicted RBP9.33□□□□□ -0.92
CLRN3-201ENST00000368671 JUNP05412 331 aaKnown RBP9.33□□□□□ -0.92
CLRN3-201ENST00000368671 CRHP06850 196 aa9.33□□□□□ -0.92
CLRN3-201ENST00000368671 SNRPAP09012 282 aaKnown RBP9.33□□□□□ -0.92
CLRN3-201ENST00000368671 ANXA4P09525 319 aaPredicted RBP9.33□□□□□ -0.92
CLRN3-201ENST00000368671 MPIP34949 423 aa9.33□□□□□ -0.92
CLRN3-201ENST00000368671 CD79BP40259 229 aa9.33□□□□□ -0.92
CLRN3-201ENST00000368671 MC3RP41968 323 aa9.33□□□□□ -0.92
CLRN3-201ENST00000368671 RFX3P48380 749 aa9.33□□□□□ -0.92
CLRN3-201ENST00000368671 KCNJ5P48544 419 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms