RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 SLC9B1P1A6NJY1 282 aa16.3■□□□□ 0.2
LMNA-205ENST00000368299 RDH16O75452 317 aa16.3■□□□□ 0.2
LMNA-205ENST00000368299 PROS1P07225 676 aa16.3■□□□□ 0.2
LMNA-205ENST00000368299 STSP08842 583 aa16.3■□□□□ 0.2
LMNA-205ENST00000368299 BTLAQ7Z6A9 289 aa16.3■□□□□ 0.2
LMNA-205ENST00000368299 CTHRC1Q96CG8 243 aa16.3■□□□□ 0.2
LMNA-205ENST00000368299 CDCA4Q9BXL8 241 aa16.3■□□□□ 0.2
LMNA-205ENST00000368299 MROQ9BYG7 248 aa16.3■□□□□ 0.2
LMNA-205ENST00000368299 GPR55Q9Y2T6 319 aaPredicted RBP16.3■□□□□ 0.2
LMNA-205ENST00000368299 A0A087WUU8 490 aa16.3■□□□□ 0.2
LMNA-205ENST00000368299 KRBA1A5PL33 1030 aa16.3■□□□□ 0.2
LMNA-205ENST00000368299 AGAP5A6NIR3 686 aa16.3■□□□□ 0.2
LMNA-205ENST00000368299 M0R129 80 aa16.3■□□□□ 0.2
LMNA-205ENST00000368299 M0R3G1 203 aa16.3■□□□□ 0.2
LMNA-205ENST00000368299 HCRTR1O43613 425 aa16.3■□□□□ 0.2
LMNA-205ENST00000368299 STX11O75558 287 aa16.3■□□□□ 0.2
LMNA-205ENST00000368299 TP53P04637 393 aaPredicted RBP16.3■□□□□ 0.2
LMNA-205ENST00000368299 TNNI3P19429 210 aa16.3■□□□□ 0.2
LMNA-205ENST00000368299 AVPR1BP47901 424 aa16.3■□□□□ 0.2
LMNA-205ENST00000368299 IRF3Q14653 427 aa16.3■□□□□ 0.2
LMNA-205ENST00000368299 OXA1LQ15070 435 aa16.3■□□□□ 0.2
LMNA-205ENST00000368299 TRIM16LQ309B1 348 aa16.3■□□□□ 0.2
LMNA-205ENST00000368299 DEFB110Q30KQ9 67 aa16.3■□□□□ 0.2
LMNA-205ENST00000368299 RRM2BQ7LG56 351 aa16.3■□□□□ 0.2
LMNA-205ENST00000368299 ZNF619Q8N2I2 560 aa16.3■□□□□ 0.2
LMNA-205ENST00000368299 DEFB119Q8N690 84 aa16.3■□□□□ 0.2
LMNA-205ENST00000368299 SIMC1Q8NDZ2 872 aa16.3■□□□□ 0.2
LMNA-205ENST00000368299 OR9A4Q8NGU2 314 aa16.3■□□□□ 0.2
LMNA-205ENST00000368299 GNPDA2Q8TDQ7 276 aa16.3■□□□□ 0.2
LMNA-205ENST00000368299 ADAMTS18Q8TE60 1221 aa16.3■□□□□ 0.2
LMNA-205ENST00000368299 ANKRD9Q96BM1 317 aaPredicted RBP16.3■□□□□ 0.2
LMNA-205ENST00000368299 NEURL2Q9BR09 285 aa16.3■□□□□ 0.2
LMNA-205ENST00000368299 SAP130Q9H0E3 1048 aa16.3■□□□□ 0.2
LMNA-205ENST00000368299 CTPS2Q9NRF8 586 aa16.3■□□□□ 0.2
LMNA-205ENST00000368299 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.3■□□□□ 0.2
LMNA-205ENST00000368299 SLC6A14Q9UN76 642 aa16.3■□□□□ 0.2
LMNA-205ENST00000368299 CHST10O43529 356 aa16.29■□□□□ 0.2
LMNA-205ENST00000368299 CNOT3O75175 753 aaKnown RBP16.29■□□□□ 0.2
LMNA-205ENST00000368299 OR5F1O95221 314 aa16.29■□□□□ 0.2
LMNA-205ENST00000368299 CD36P16671 472 aa16.29■□□□□ 0.2
LMNA-205ENST00000368299 SLC15A1P46059 708 aa16.29■□□□□ 0.2
LMNA-205ENST00000368299 HNRNPKP61978 463 aaKnown RBP eCLIP16.29■□□□□ 0.25e-6■■□□□ 11.6
LMNA-205ENST00000368299 RPL6Q02878 288 aaKnown RBP16.29■□□□□ 0.2
LMNA-205ENST00000368299 MGAT2Q10469 447 aa16.29■□□□□ 0.2
LMNA-205ENST00000368299 CBX3Q13185 183 aa16.29■□□□□ 0.2
LMNA-205ENST00000368299 DGUOKQ16854 277 aa16.29■□□□□ 0.2
LMNA-205ENST00000368299 TIGD6Q17RP2 521 aa16.29■□□□□ 0.2
LMNA-205ENST00000368299 DCST2Q5T1A1 773 aa16.29■□□□□ 0.2
LMNA-205ENST00000368299 MEDAGQ5VYS4 303 aa16.29■□□□□ 0.2
LMNA-205ENST00000368299 PTCRAQ6ISU1 281 aaPredicted RBP16.29■□□□□ 0.2
LMNA-205ENST00000368299 CLIP4Q8N3C7 705 aa16.29■□□□□ 0.2
LMNA-205ENST00000368299 COX18Q8N8Q8 333 aa16.29■□□□□ 0.2
LMNA-205ENST00000368299 NDNFQ8TB73 568 aa16.29■□□□□ 0.2
LMNA-205ENST00000368299 POLR2J2Q9GZM3 115 aaKnown RBP16.29■□□□□ 0.2
LMNA-205ENST00000368299 SLC25A19Q9HC21 320 aa16.29■□□□□ 0.2
LMNA-205ENST00000368299 FBXO8Q9NRD0 319 aa16.29■□□□□ 0.2
LMNA-205ENST00000368299 MRPS33Q9Y291 106 aaKnown RBP16.29■□□□□ 0.2
LMNA-205ENST00000368299 EYSQ5T1H1 3165 aa16.29■□□□□ 0.2
LMNA-205ENST00000368299 CPSF4LA6NMK7 179 aaKnown RBP16.29■□□□□ 0.2
LMNA-205ENST00000368299 COQ9O75208 318 aa16.29■□□□□ 0.2
LMNA-205ENST00000368299 DBIP07108 87 aaKnown RBP16.29■□□□□ 0.2
LMNA-205ENST00000368299 SERPINB10P48595 397 aa16.29■□□□□ 0.2
LMNA-205ENST00000368299 ZNF730Q6ZMV8 503 aa16.29■□□□□ 0.2
LMNA-205ENST00000368299 PLEKHM3Q6ZWE6 761 aa16.29■□□□□ 0.2
LMNA-205ENST00000368299 C17orf82Q86X59 251 aaPredicted RBP16.29■□□□□ 0.2
LMNA-205ENST00000368299 CAMKK1Q8N5S9 505 aa16.29■□□□□ 0.2
LMNA-205ENST00000368299 IL4I1Q96RQ9 567 aa16.29■□□□□ 0.2
LMNA-205ENST00000368299 MCHR1Q99705 422 aa16.29■□□□□ 0.2
LMNA-205ENST00000368299 POLDIP3Q9BY77 421 aaKnown RBP16.29■□□□□ 0.2
LMNA-205ENST00000368299 FOXQ1Q9C009 403 aa16.29■□□□□ 0.2
LMNA-205ENST00000368299 POLE3Q9NRF9 147 aa16.29■□□□□ 0.2
LMNA-205ENST00000368299 SEMA4GQ9NTN9 838 aa16.29■□□□□ 0.2
LMNA-205ENST00000368299 FBXL21Q9UKT6 434 aa16.29■□□□□ 0.2
LMNA-205ENST00000368299 FRS3O43559 492 aa16.28■□□□□ 0.2
LMNA-205ENST00000368299 OR10H2O60403 315 aa16.28■□□□□ 0.2
LMNA-205ENST00000368299 IGFBP1P08833 259 aaPredicted RBP16.28■□□□□ 0.2
LMNA-205ENST00000368299 RNH1P13489 461 aaKnown RBP16.28■□□□□ 0.2
LMNA-205ENST00000368299 RPS4Y1P22090 263 aaKnown RBP16.28■□□□□ 0.2
LMNA-205ENST00000368299 TGFBR2P37173 567 aa16.28■□□□□ 0.2
LMNA-205ENST00000368299 MAP3K8P41279 467 aa16.28■□□□□ 0.2
LMNA-205ENST00000368299 GIPRP48546 466 aa16.28■□□□□ 0.2
LMNA-205ENST00000368299 SMSP52788 366 aa16.28■□□□□ 0.2
LMNA-205ENST00000368299 FAM53BQ14153 422 aa16.28■□□□□ 0.2
LMNA-205ENST00000368299 OCLNQ16625 522 aa16.28■□□□□ 0.2
LMNA-205ENST00000368299 DECR1Q16698 335 aa16.28■□□□□ 0.2
LMNA-205ENST00000368299 SLC25A30Q5SVS4 291 aa16.28■□□□□ 0.2
LMNA-205ENST00000368299 COL13A1Q5TAT6 717 aaPredicted RBP16.28■□□□□ 0.2
LMNA-205ENST00000368299 PLAG1Q6DJT9 500 aa16.28■□□□□ 0.2
LMNA-205ENST00000368299 ZNF836Q6ZNA1 936 aa16.28■□□□□ 0.2
LMNA-205ENST00000368299 DYNC2LI1Q8TCX1 351 aa16.28■□□□□ 0.2
LMNA-205ENST00000368299 ACOT11Q8WXI4 607 aaPredicted RBP16.28■□□□□ 0.2
LMNA-205ENST00000368299 MAP3K3Q99759 626 aa16.28■□□□□ 0.2
LMNA-205ENST00000368299 DAPK2Q9UIK4 370 aa16.28■□□□□ 0.2
LMNA-205ENST00000368299 RPL36Q9Y3U8 105 aaKnown RBP16.28■□□□□ 0.2
LMNA-205ENST00000368299 AQP9O43315 295 aa16.28■□□□□ 0.2
LMNA-205ENST00000368299 ENTPD6O75354 484 aa16.28■□□□□ 0.2
LMNA-205ENST00000368299 ADORA3P0DMS8 318 aa16.28■□□□□ 0.2
LMNA-205ENST00000368299 TRHRP34981 398 aaPredicted RBP16.28■□□□□ 0.2
LMNA-205ENST00000368299 EEF1A1P68104 462 aaKnown RBP16.28■□□□□ 0.2
LMNA-205ENST00000368299 CDK5Q00535 292 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms