RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 OR2M3Q8NG83 312 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 ADOQ96SZ5 270 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 TACO1Q9BSH4 297 aaKnown RBP7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 EFCAB11Q9BUY7 163 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 TSPYL1Q9H0U9 437 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 OR10A4Q9H209 315 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 DSN1Q9H410 356 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 C12orf49Q9H741 205 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 ANKRA2Q9H9E1 313 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 XAB2Q9HCS7 855 aaKnown RBP7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 MS4A12Q9NXJ0 267 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 NPAP1Q9NZP6 1156 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 PHF11Q9UIL8 331 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 PLLPQ9Y342 182 aa7.53□□□□□ -1.2
HMGB1P39-201ENST00000366304 WISP3O95389 354 aaPredicted RBP7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 OPN1LWP04000 364 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 CCDC166P0CW27 439 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 HK1P19367 917 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 TLX1P31314 330 aaPredicted RBP7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 GZMKP49863 264 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 XKP51811 444 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 CDH11P55287 796 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 DSCR4P56555 118 aaPredicted RBP7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 CORO7P57737 925 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 IRF8Q02556 426 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 DDX39BQ13838 428 aaKnown RBP7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 GGTLC2Q14390 218 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 LTB4RQ15722 352 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 TBCCQ15814 346 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 PDK4Q16654 411 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 TMEM44Q2T9K0 475 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 PRICKLE4Q2TBC4 344 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 TRMT12Q53H54 448 aaKnown RBP7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 RAET1LQ5VY80 246 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 FAM180BQ6P0A1 224 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 NPSR1Q6W5P4 371 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 NUFIP2Q7Z417 695 aaKnown RBP7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 GALNT7Q86SF2 657 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 SYCE1Q8N0S2 351 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 PPM1NQ8N819 430 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 NAT8LQ8N9F0 302 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 BANPQ8N9N5 519 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 C7orf57Q8NEG2 295 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 ADCY4Q8NFM4 1077 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 OR7G1Q8NGA0 311 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 HUS1BQ8NHY5 278 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 ANKRD7Q92527 254 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 PROX1Q92786 737 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 RGMAQ96B86 450 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 NXNL1Q96CM4 212 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 CMTM7Q96FZ5 175 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 SLC35A4Q96G79 324 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 GMPPAQ96IJ6 420 aaPredicted RBP7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 ADGRG7Q96K78 797 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 COL21A1Q96P44 957 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 NAP1L3Q99457 506 aaPredicted RBP7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 MTERF1Q99551 399 aaKnown RBP7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 DESI2Q9BSY9 194 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 DDX31Q9H8H2 851 aaKnown RBP7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 ZBTB26Q9HCK0 441 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 MAT2BQ9NZL9 334 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 MED11Q9P086 117 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 CTNNAL1Q9UBT7 734 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 EMC9Q9Y3B6 208 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 PLCE1Q9P212 2302 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 KMT2CQ8NEZ4 4911 aaKnown RBP7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 CMYA5Q8N3K9 4069 aa7.52□□□□□ -1.21
HMGB1P39-201ENST00000366304 OR6C70A6NIJ9 312 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 TO15178 435 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 ACOX3O15254 700 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 STK16O75716 305 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 RGS9O75916 674 aaPredicted RBP7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 SASH3O75995 380 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 TGFAP01135 160 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 KRT14P02533 472 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 CT45A8P0DMV1 189 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 CT45A9P0DMV2 189 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 CPMP14384 443 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 PGAM1P18669 254 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 NT5EP21589 574 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 DRD5P21918 477 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 EDNRAP25101 427 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 AGTR1P30556 359 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 IL2RGP31785 369 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 TTKP33981 857 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 PPICP45877 212 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 SARNPP82979 210 aaKnown RBP7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 P2RY6Q15077 328 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 CT45A2Q5DJT8 189 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 SFRP5Q5T4F7 317 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 OR52E8Q6IFG1 317 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 FAM45BPQ6NSW5 357 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 PPP4R4Q6NUP7 873 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 MED27Q6P2C8 311 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 BEND4Q6ZU67 534 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 C3orf56Q8N813 242 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 STEAP2Q8NFT2 490 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 OR4K17Q8NGC6 315 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 OR4N2Q8NGD1 307 aa7.51□□□□□ -1.21
HMGB1P39-201ENST00000366304 OR52R1Q8NGF1 315 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms