RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 SGPP1Q9BX95 441 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 SLC46A2Q9BY10 475 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 RRAGCQ9HB90 399 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 NLGN3Q9NZ94 848 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 P2RX2Q9UBL9 471 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 EIF3KQ9UBQ5 218 aaKnown RBP9.51□□□□□ -0.89
PTPRA-203ENST00000356147 SCML1Q9UN30 329 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 ING4Q9UNL4 249 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 SCN2AQ99250 2005 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 SCN3AQ9NY46 2000 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 TEX13CA0A0J9YWL9 993 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 A0A1W2PQ45 241 aaPredicted RBP9.51□□□□□ -0.89
PTPRA-203ENST00000356147 A0A1W2PQY0 241 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 HMGN2P05204 90 aaKnown RBP9.51□□□□□ -0.89
PTPRA-203ENST00000356147 HOXB3P14651 431 aaPredicted RBP9.51□□□□□ -0.89
PTPRA-203ENST00000356147 NCBP2P52298 156 aaKnown RBP eCLIP9.51□□□□□ -0.89
PTPRA-203ENST00000356147 ATP12AP54707 1039 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 FUT5Q11128 374 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 KHDRBS2Q5VWX1 349 aaKnown RBP9.51□□□□□ -0.89
PTPRA-203ENST00000356147 PLBD1Q6P4A8 553 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 FAM92BQ6ZTR7 304 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 COMMD7Q86VX2 200 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 NRMQ8IXM6 262 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 ZNF485Q8NCK3 441 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 TRMT2BQ96GJ1 504 aaKnown RBP9.51□□□□□ -0.89
PTPRA-203ENST00000356147 ARPC5LQ9BPX5 153 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 FGF20Q9NP95 211 aaPredicted RBP9.51□□□□□ -0.89
PTPRA-203ENST00000356147 LHX9Q9NQ69 397 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 HINT3Q9NQE9 182 aaKnown RBP9.51□□□□□ -0.89
PTPRA-203ENST00000356147 B3GNT2Q9NY97 397 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 TAS2R7Q9NYW3 318 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 ACAD8Q9UKU7 415 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 PPIEQ9UNP9 301 aaKnown RBP9.51□□□□□ -0.89
PTPRA-203ENST00000356147 TCF20Q9UGU0 1960 aaKnown RBP9.5□□□□□ -0.89
PTPRA-203ENST00000356147 GRM6O15303 877 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 NUPL2O15504 423 aaKnown RBP9.5□□□□□ -0.89
PTPRA-203ENST00000356147 LATO43561 262 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 OR1F1O43749 312 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 MPC2O95563 127 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 MT-ND4P03905 459 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 SRPRAP08240 638 aaKnown RBP9.5□□□□□ -0.89
PTPRA-203ENST00000356147 BTCP35070 178 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 BSGP35613 385 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 EPHA5P54756 1037 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 EXOSC2Q13868 293 aaKnown RBP9.5□□□□□ -0.89
PTPRA-203ENST00000356147 PLA1AQ53H76 456 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 MZT2AQ6P582 158 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 TMEM107Q6UX40 140 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 LIPIQ6XZB0 460 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 ZNF547Q8IVP9 402 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 KLHL36Q8N4N3 616 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 TMEM99Q8N816 258 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 OR4D9Q8NGE8 314 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 DNAJA4Q8WW22 397 aaPredicted RBP9.5□□□□□ -0.89
PTPRA-203ENST00000356147 ORAI1Q96D31 301 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 SAMD8Q96LT4 415 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 HCAR1Q9BXC0 346 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 CPEB1Q9BZB8 566 aaKnown RBP9.5□□□□□ -0.89
PTPRA-203ENST00000356147 ENKD1Q9H0I2 346 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 CCDC86Q9H6F5 360 aaKnown RBP9.5□□□□□ -0.89
PTPRA-203ENST00000356147 FLVCR2Q9UPI3 526 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 POLHQ9Y253 713 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 EXOSC1Q9Y3B2 195 aaKnown RBP9.5□□□□□ -0.89
PTPRA-203ENST00000356147 CHD7Q9P2D1 2997 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 SPTBP11277 2137 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 ANTXRLA6NF34 631 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 B8ZZF3 427 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 KIAA0355O15063 1070 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 PGRMC2O15173 223 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 LCMT2O60294 686 aaKnown RBP9.5□□□□□ -0.89
PTPRA-203ENST00000356147 KELP23276 732 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 STOMP27105 288 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 PPP2R1BP30154 601 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 TALDO1P37837 337 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 SMIM11AP58511 58 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 DGCR2P98153 550 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 E2F1Q01094 437 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 FZD5Q13467 585 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 LGALSLQ3ZCW2 172 aaPredicted RBP9.5□□□□□ -0.89
PTPRA-203ENST00000356147 ZDHHC20Q5W0Z9 365 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 CD200R1LQ6Q8B3 271 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 ADGRD2Q7Z7M1 963 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 LRRC56Q8IYG6 542 aaPredicted RBP9.5□□□□□ -0.89
PTPRA-203ENST00000356147 ZNF687Q8N1G0 1237 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 PIAS4Q8N2W9 510 aaPredicted RBP9.5□□□□□ -0.89
PTPRA-203ENST00000356147 FBXO15Q8NCQ5 510 aaPredicted RBP9.5□□□□□ -0.89
PTPRA-203ENST00000356147 OR10H4Q8NGA5 316 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 PMEPA1Q969W9 287 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 CREB3L1Q96BA8 519 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 TNFRSF10DQ9UBN6 386 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 SRRDQ9UH36 339 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 BACE2Q9Y5Z0 518 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 HCFC2Q9Y5Z7 792 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 CACNG2Q9Y698 323 aa9.5□□□□□ -0.89
PTPRA-203ENST00000356147 MANSC4A6NHS7 340 aaPredicted RBP9.49□□□□□ -0.89
PTPRA-203ENST00000356147 SGK494L7N484 410 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 CDC42EP2O14613 210 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 SSNA1O43805 119 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 PQBP1O60828 265 aaKnown RBP9.49□□□□□ -0.89
PTPRA-203ENST00000356147 TYRP14679 529 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms