RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 NDUFB5O43674 189 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 SCO2O43819 266 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 CPNE3O75131 537 aaKnown RBP11.54□□□□□ -0.56
VPS33B-201ENST00000333371 THY1P04216 161 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 SLC35G4P0C7Q5 338 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 RPS5P46782 204 aaKnown RBP11.54□□□□□ -0.56
VPS33B-201ENST00000333371 SNRPD2P62316 118 aaKnown RBP11.54□□□□□ -0.56
VPS33B-201ENST00000333371 QPRTQ15274 297 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 CCDC85BQ15834 202 aaPredicted RBP11.54□□□□□ -0.56
VPS33B-201ENST00000333371 WSCD2Q2TBF2 565 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 MINDY4Q4G0A6 757 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 SLC25A30Q5SVS4 291 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 PPP2R2DQ66LE6 453 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 SYCE2Q6PIF2 218 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 LYPD8Q6UX82 237 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 HSDL2Q6YN16 418 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 ERN2Q76MJ5 926 aaKnown RBP11.54□□□□□ -0.56
VPS33B-201ENST00000333371 ZNF765Q7L2R6 523 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 SHISA5Q8N114 240 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 YIPF7Q8N8F6 280 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 ZNF485Q8NCK3 441 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 OR2A1Q8NGT9 310 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 SPRYD4Q8WW59 207 aaPredicted RBP11.54□□□□□ -0.56
VPS33B-201ENST00000333371 OR7D2Q96RA2 312 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 ATF6BQ99941 703 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 SLC38A1Q9H2H9 487 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 ISG20L2Q9H9L3 353 aaKnown RBP11.54□□□□□ -0.56
VPS33B-201ENST00000333371 ALG5Q9Y673 324 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 MAU2Q9Y6X3 613 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 AIFM1O95831 613 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 SPTBP11277 2137 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 NTSP30990 170 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 GABRA5P31644 462 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 STXBP1P61764 594 aaKnown RBP11.54□□□□□ -0.56
VPS33B-201ENST00000333371 VASNQ6EMK4 673 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 IL20RBQ6UXL0 311 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 NR2C2APQ86WQ0 139 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 KLBQ86Z14 1044 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 NRMQ8IXM6 262 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 TMEM145Q8NBT3 493 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 C7orf57Q8NEG2 295 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 BBS10Q8TAM1 723 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 TMEM255BQ8WV15 326 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 NACC2Q96BF6 587 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 UPRTQ96BW1 309 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 FCRL4Q96PJ5 515 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 SMAD5Q99717 465 aaKnown RBP11.54□□□□□ -0.56
VPS33B-201ENST00000333371 PPP1R3EQ9H7J1 279 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 MED20Q9H944 212 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 LIPT1Q9Y234 373 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 GABRPO00591 440 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 ALPPP05187 535 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 MAP2K3P46734 347 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 OMPP47874 163 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 GALK2Q01415 458 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 EFR3AQ14156 821 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 LRRC32Q14392 662 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 NDUFA9Q16795 377 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 LCN1P1Q5VSP4 162 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 TRIQKQ629K1 86 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 PLET1Q6UQ28 207 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 FBXL6Q8N531 539 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 ACOT4Q8N9L9 421 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 NEIL3Q8TAT5 605 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 RNF32Q9H0A6 362 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 TMEM245Q9H330 911 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 IGFLR1Q9H665 355 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 GSTK1Q9Y2Q3 226 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 CENPVL1A0A0U1RR11 272 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.53□□□□□ -0.56
VPS33B-201ENST00000333371 GSAPA4D1B5 854 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 C1QTNF3-AMACRE9PGA6 284 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 AKR7A2O43488 359 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 PCDH8O95206 1070 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 PRKCAP17252 672 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 IL12RB1P42701 662 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 SLC9A5Q14940 896 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 PDGFRLQ15198 375 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 RRM2BQ7LG56 351 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 CADM2Q8N3J6 435 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 SIRT6Q8N6T7 355 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 ARIH2OSQ8N7S6 290 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 C19orf18Q8NEA5 215 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 DIO2Q92813 273 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 SECISBP2Q96T21 854 aaKnown RBP11.53□□□□□ -0.56
VPS33B-201ENST00000333371 ZNF649Q9BS31 505 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 BCL2L10Q9HD36 194 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 GIMAP4Q9NUV9 329 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 TAS2R7Q9NYW3 318 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 MOSPD1Q9UJG1 213 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 ASB4Q9Y574 426 aa11.53□□□□□ -0.56
VPS33B-201ENST00000333371 TP53BP1Q12888 1972 aaPredicted RBP11.52□□□□□ -0.56
VPS33B-201ENST00000333371 KDM4EB2RXH2 506 aaPredicted RBP11.52□□□□□ -0.56
VPS33B-201ENST00000333371 CDC42EP2O14613 210 aa11.52□□□□□ -0.56
VPS33B-201ENST00000333371 SEC14L5O43304 696 aa11.52□□□□□ -0.56
VPS33B-201ENST00000333371 YES1P07947 543 aa11.52□□□□□ -0.56
VPS33B-201ENST00000333371 ALAS2P22557 587 aa11.52□□□□□ -0.56
VPS33B-201ENST00000333371 ATP6V1E1P36543 226 aa11.52□□□□□ -0.56
VPS33B-201ENST00000333371 SOX9P48436 509 aa11.52□□□□□ -0.56
VPS33B-201ENST00000333371 PDX1P52945 283 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms