RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 CARD8Q9Y2G2 431 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 GPR52Q9Y2T5 361 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 WDR45Q9Y484 360 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 SLC22A7Q9Y694 548 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 ARHGEF17Q96PE2 2063 aaPredicted RBP13.61□□□□□ -0.23
TPM3-206ENST00000330188 SCN2AQ99250 2005 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 URADA6NGE7 173 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 ZNF670-ZNF695F2Z2N8 137 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 CTDSP2O14595 271 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 CPMP14384 443 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 TLX1P31314 330 aaPredicted RBP13.6□□□□□ -0.23
TPM3-206ENST00000330188 SEPHS1P49903 392 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 DECR1Q16698 335 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 KLHL22Q53GT1 634 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 TMEM92Q6UXU6 159 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 RRM2BQ7LG56 351 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 GDF7Q7Z4P5 450 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 C11orf74Q86VG3 221 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 CAMKVQ8NCB2 501 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 ACOT11Q8WXI4 607 aaPredicted RBP13.6□□□□□ -0.23
TPM3-206ENST00000330188 RNFT2Q96EX2 444 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 SLC41A3Q96GZ6 507 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 MTHFD2LQ9H903 347 aaPredicted RBP13.6□□□□□ -0.23
TPM3-206ENST00000330188 PTGFRNQ9P2B2 879 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 PCDHGB6Q9Y5F9 930 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 ZNF860A6NHJ4 632 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 KDM4EB2RXH2 506 aaPredicted RBP13.6□□□□□ -0.23
TPM3-206ENST00000330188 OR5F1O95221 314 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 APOL3O95236 402 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 FPR3P25089 353 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 TPMTP51580 245 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 MRPS21P82921 87 aaKnown RBP13.6□□□□□ -0.23
TPM3-206ENST00000330188 RAB40BQ12829 278 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 MINDY4Q4G0A6 757 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 ZNF628Q5EBL2 1059 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 SPANXN2Q5MJ10 180 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 ZNF836Q6ZNA1 936 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 ABHD13Q7L211 337 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 PEX5LQ8IYB4 626 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 SHISA5Q8N114 240 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 POC5Q8NA72 575 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 ANKK1Q8NFD2 765 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 OR9Q1Q8NGQ5 310 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 ITPKCQ96DU7 683 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 SLC38A2Q96QD8 506 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 ZFYVE21Q9BQ24 234 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 SMURF1Q9HCE7 757 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 CPNE5Q9HCH3 593 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 PRDM9Q9NQV7 894 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 EVA1BQ9NVM1 165 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 CRNNQ9UBG3 495 aaPredicted RBP13.6□□□□□ -0.23
TPM3-206ENST00000330188 SSR3Q9UNL2 185 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 CAB39Q9Y376 341 aaPredicted RBP13.6□□□□□ -0.23
TPM3-206ENST00000330188 MRPS2Q9Y399 296 aaKnown RBP13.6□□□□□ -0.23
TPM3-206ENST00000330188 SZT2Q5T011 3432 aa13.6□□□□□ -0.23
TPM3-206ENST00000330188 PNMA8CA0A1B0GUJ8 204 aa13.59□□□□□ -0.23
TPM3-206ENST00000330188 KLF4O43474 513 aa13.59□□□□□ -0.23
TPM3-206ENST00000330188 PIP5K1CO60331 668 aa13.59□□□□□ -0.23
TPM3-206ENST00000330188 GNSP15586 552 aa13.59□□□□□ -0.23
TPM3-206ENST00000330188 CPEP16870 476 aa13.59□□□□□ -0.23
TPM3-206ENST00000330188 ALOX12P18054 663 aa13.59□□□□□ -0.23
TPM3-206ENST00000330188 ZNF10P21506 573 aaPredicted RBP13.59□□□□□ -0.23
TPM3-206ENST00000330188 DRD1P21728 446 aa13.59□□□□□ -0.23
TPM3-206ENST00000330188 STAT5AP42229 794 aa13.59□□□□□ -0.23
TPM3-206ENST00000330188 LSSP48449 732 aa13.59□□□□□ -0.23
TPM3-206ENST00000330188 WNT4P56705 351 aa13.59□□□□□ -0.23
TPM3-206ENST00000330188 YPEL5P62699 121 aa13.59□□□□□ -0.23
TPM3-206ENST00000330188 ID2Q02363 134 aa13.59□□□□□ -0.23
TPM3-206ENST00000330188 TRMT12Q53H54 448 aaKnown RBP13.59□□□□□ -0.23
TPM3-206ENST00000330188 CLEC12AQ5QGZ9 265 aa13.59□□□□□ -0.23
TPM3-206ENST00000330188 FHL5Q5TD97 284 aa13.59□□□□□ -0.23
TPM3-206ENST00000330188 PRSS41Q7RTY9 318 aa13.59□□□□□ -0.23
TPM3-206ENST00000330188 TRIM48Q8IWZ4 208 aa13.59□□□□□ -0.23
TPM3-206ENST00000330188 DNAJC5GQ8N7S2 189 aa13.59□□□□□ -0.23
TPM3-206ENST00000330188 OR4Q3Q8NH05 313 aa13.59□□□□□ -0.23
TPM3-206ENST00000330188 TMEM255BQ8WV15 326 aa13.59□□□□□ -0.23
TPM3-206ENST00000330188 PATE1Q8WXA2 126 aa13.59□□□□□ -0.23
TPM3-206ENST00000330188 SDF2Q99470 211 aa13.59□□□□□ -0.23
TPM3-206ENST00000330188 SDHCQ99643 169 aaPredicted RBP13.59□□□□□ -0.23
TPM3-206ENST00000330188 SIAEQ9HAT2 523 aa13.59□□□□□ -0.23
TPM3-206ENST00000330188 LYRM4Q9HD34 91 aa13.59□□□□□ -0.23
TPM3-206ENST00000330188 KLHL3Q9UH77 587 aa13.59□□□□□ -0.23
TPM3-206ENST00000330188 PIAS3Q9Y6X2 628 aa13.59□□□□□ -0.23
TPM3-206ENST00000330188 CENPVL1A0A0U1RR11 272 aa13.58□□□□□ -0.23
TPM3-206ENST00000330188 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.58□□□□□ -0.23
TPM3-206ENST00000330188 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.58□□□□□ -0.23
TPM3-206ENST00000330188 IRGMA1A4Y4 181 aa13.58□□□□□ -0.23
TPM3-206ENST00000330188 SNTNA6NMZ2 147 aa13.58□□□□□ -0.23
TPM3-206ENST00000330188 H0YGG7 62 aa13.58□□□□□ -0.23
TPM3-206ENST00000330188 PVRP15151 417 aa13.58□□□□□ -0.23
TPM3-206ENST00000330188 MYL12AP19105 171 aa13.58□□□□□ -0.23
TPM3-206ENST00000330188 AKT2P31751 481 aa13.58□□□□□ -0.23
TPM3-206ENST00000330188 GPR4P46093 362 aa13.58□□□□□ -0.23
TPM3-206ENST00000330188 MTNR1AP48039 350 aa13.58□□□□□ -0.23
TPM3-206ENST00000330188 ARF3P61204 181 aaPredicted RBP13.58□□□□□ -0.23
TPM3-206ENST00000330188 EEF1A1P68104 462 aaKnown RBP13.58□□□□□ -0.23
TPM3-206ENST00000330188 BNC1Q01954 994 aa13.58□□□□□ -0.23
TPM3-206ENST00000330188 EXOSC6Q5RKV6 272 aaKnown RBP13.58□□□□□ -0.23
TPM3-206ENST00000330188 CCNJQ5T5M9 372 aa13.58□□□□□ -0.23
TPM3-206ENST00000330188 OR2G6Q5TZ20 316 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms