RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 NPAP1Q9NZP6 1156 aa20.54■□□□□ 0.88
TPM4-201ENST00000300933 MUTYHQ9UIF7 546 aa20.54■□□□□ 0.88
TPM4-201ENST00000300933 MMP17Q9ULZ9 603 aa20.54■□□□□ 0.88
TPM4-201ENST00000300933 FHP07954 510 aa20.53■□□□□ 0.88
TPM4-201ENST00000300933 NDUFS1P28331 727 aa20.53■□□□□ 0.88
TPM4-201ENST00000300933 RPS15AP62244 130 aaKnown RBP20.53■□□□□ 0.88
TPM4-201ENST00000300933 DEFB110Q30KQ9 67 aa20.53■□□□□ 0.88
TPM4-201ENST00000300933 RFPL4BQ6ZWI9 263 aa20.53■□□□□ 0.88
TPM4-201ENST00000300933 KRT73Q86Y46 540 aa20.53■□□□□ 0.88
TPM4-201ENST00000300933 CADM2Q8N3J6 435 aa20.53■□□□□ 0.88
TPM4-201ENST00000300933 SRFBP1Q8NEF9 429 aaKnown RBP20.53■□□□□ 0.88
TPM4-201ENST00000300933 PIK3R3Q92569 461 aa20.53■□□□□ 0.88
TPM4-201ENST00000300933 FYTTD1Q96QD9 318 aaKnown RBP20.53■□□□□ 0.88
TPM4-201ENST00000300933 GPA33Q99795 319 aa20.53■□□□□ 0.88
TPM4-201ENST00000300933 SARGQ9BW04 601 aa20.53■□□□□ 0.88
TPM4-201ENST00000300933 HRASLS2Q9NWW9 162 aa20.53■□□□□ 0.88
TPM4-201ENST00000300933 CPNE7Q9UBL6 633 aa20.53■□□□□ 0.88
TPM4-201ENST00000300933 FTSJ1Q9UET6 329 aa20.53■□□□□ 0.88
TPM4-201ENST00000300933 Q5BKY6 102 aa20.53■□□□□ 0.88
TPM4-201ENST00000300933 LYPD8Q6UX82 237 aa20.53■□□□□ 0.88
TPM4-201ENST00000300933 TAF8Q7Z7C8 310 aa20.53■□□□□ 0.88
TPM4-201ENST00000300933 RAB43Q86YS6 212 aa20.53■□□□□ 0.88
TPM4-201ENST00000300933 IRF2BPLQ9H1B7 796 aa20.53■□□□□ 0.88
TPM4-201ENST00000300933 RANGRFQ9HD47 186 aaPredicted RBP20.53■□□□□ 0.88
TPM4-201ENST00000300933 REV1Q9UBZ9 1251 aa20.53■□□□□ 0.88
TPM4-201ENST00000300933 PCOLCE2Q9UKZ9 415 aa20.53■□□□□ 0.88
TPM4-201ENST00000300933 UGT2B17O75795 530 aa20.52■□□□□ 0.88
TPM4-201ENST00000300933 ZIC2O95409 532 aaPredicted RBP20.52■□□□□ 0.88
TPM4-201ENST00000300933 RFX2P48378 723 aa20.52■□□□□ 0.88
TPM4-201ENST00000300933 TSTQ16762 297 aaKnown RBP20.52■□□□□ 0.88
TPM4-201ENST00000300933 DENND6BQ8NEG7 585 aa20.52■□□□□ 0.88
TPM4-201ENST00000300933 SLC37A2Q8TED4 501 aa20.52■□□□□ 0.88
TPM4-201ENST00000300933 PRRG3Q9BZD7 231 aa20.52■□□□□ 0.88
TPM4-201ENST00000300933 UCK2Q9BZX2 261 aa20.52■□□□□ 0.88
TPM4-201ENST00000300933 EXOSC4Q9NPD3 245 aaKnown RBP20.52■□□□□ 0.88
TPM4-201ENST00000300933 KCMF1Q9P0J7 381 aa20.52■□□□□ 0.88
TPM4-201ENST00000300933 H0YGG7 62 aa20.52■□□□□ 0.88
TPM4-201ENST00000300933 SNX4O95219 450 aa20.52■□□□□ 0.88
TPM4-201ENST00000300933 HOXC4P09017 264 aaPredicted RBP20.52■□□□□ 0.88
TPM4-201ENST00000300933 GSTM5P46439 218 aa20.52■□□□□ 0.88
TPM4-201ENST00000300933 ARF3P61204 181 aaPredicted RBP20.52■□□□□ 0.88
TPM4-201ENST00000300933 CSNK2BP67870 215 aa20.52■□□□□ 0.88
TPM4-201ENST00000300933 MADCAM1Q13477 382 aa20.52■□□□□ 0.88
TPM4-201ENST00000300933 CCDC85BQ15834 202 aaPredicted RBP20.52■□□□□ 0.88
TPM4-201ENST00000300933 CCNJQ5T5M9 372 aa20.52■□□□□ 0.88
TPM4-201ENST00000300933 PGBD2Q6P3X8 592 aa20.52■□□□□ 0.88
TPM4-201ENST00000300933 SIX5Q8N196 739 aa20.52■□□□□ 0.88
TPM4-201ENST00000300933 ASB12Q8WXK4 309 aa20.52■□□□□ 0.88
TPM4-201ENST00000300933 GAL3ST3Q96A11 431 aa20.52■□□□□ 0.88
TPM4-201ENST00000300933 ZNF764Q96H86 408 aaPredicted RBP20.52■□□□□ 0.88
TPM4-201ENST00000300933 C10orf90Q96M02 699 aa20.52■□□□□ 0.88
TPM4-201ENST00000300933 FNDC11Q9BVV2 318 aa20.52■□□□□ 0.88
TPM4-201ENST00000300933 CAPN10Q9HC96 672 aa20.52■□□□□ 0.88
TPM4-201ENST00000300933 GIMAP4Q9NUV9 329 aa20.52■□□□□ 0.88
TPM4-201ENST00000300933 DNAJC27Q9NZQ0 273 aa20.52■□□□□ 0.88
TPM4-201ENST00000300933 MEIOCA2RUB1 952 aa20.51■□□□□ 0.87
TPM4-201ENST00000300933 CCDC85CA6NKD9 419 aa20.51■□□□□ 0.87
TPM4-201ENST00000300933 EMC8O43402 210 aa20.51■□□□□ 0.87
TPM4-201ENST00000300933 AVPR1BP47901 424 aa20.51■□□□□ 0.87
TPM4-201ENST00000300933 PRR5P85299 388 aa20.51■□□□□ 0.87
TPM4-201ENST00000300933 MLLT1Q03111 559 aaPredicted RBP20.51■□□□□ 0.87
TPM4-201ENST00000300933 DOC2BQ14184 412 aa20.51■□□□□ 0.87
TPM4-201ENST00000300933 BAK1Q16611 211 aa20.51■□□□□ 0.87
TPM4-201ENST00000300933 TRMT12Q53H54 448 aaKnown RBP20.51■□□□□ 0.87
TPM4-201ENST00000300933 IQCHQ86VS3 1027 aa20.51■□□□□ 0.87
TPM4-201ENST00000300933 TMEM52Q8NDY8 209 aa20.51■□□□□ 0.87
TPM4-201ENST00000300933 SLC35A4Q96G79 324 aa20.51■□□□□ 0.87
TPM4-201ENST00000300933 POLR2J3Q9H1A7 115 aaKnown RBP20.51■□□□□ 0.87
TPM4-201ENST00000300933 POLMQ9NP87 494 aaPredicted RBP20.51■□□□□ 0.87
TPM4-201ENST00000300933 ZAR1LA6NP61 321 aa20.51■□□□□ 0.87
TPM4-201ENST00000300933 ARHGAP33O14559 1287 aa20.51■□□□□ 0.87
TPM4-201ENST00000300933 DDOSTP39656 456 aa20.51■□□□□ 0.87
TPM4-201ENST00000300933 PDX1P52945 283 aa20.51■□□□□ 0.87
TPM4-201ENST00000300933 GNG2P59768 71 aa20.51■□□□□ 0.87
TPM4-201ENST00000300933 CDC42P60953 191 aa20.51■□□□□ 0.87
TPM4-201ENST00000300933 KIR2DS3Q14952 304 aa20.51■□□□□ 0.87
TPM4-201ENST00000300933 UBE2J2Q8N2K1 259 aa20.51■□□□□ 0.87
TPM4-201ENST00000300933 GPR151Q8TDV0 419 aa20.51■□□□□ 0.87
TPM4-201ENST00000300933 SLC22A18Q96BI1 424 aa20.51■□□□□ 0.87
TPM4-201ENST00000300933 CITED4Q96RK1 184 aa20.51■□□□□ 0.87
TPM4-201ENST00000300933 SLC38A1Q9H2H9 487 aa20.51■□□□□ 0.87
TPM4-201ENST00000300933 C8orf33Q9H7E9 229 aaPredicted RBP20.51■□□□□ 0.87
TPM4-201ENST00000300933 TIGARQ9NQ88 270 aa20.51■□□□□ 0.87
TPM4-201ENST00000300933 MAN2C1Q9NTJ4 1040 aa20.51■□□□□ 0.87
TPM4-201ENST00000300933 NUFIP1Q9UHK0 495 aaKnown RBP20.51■□□□□ 0.87
TPM4-201ENST00000300933 CPSF4LA6NMK7 179 aaKnown RBP20.5■□□□□ 0.87
TPM4-201ENST00000300933 EIF2B5Q13144 721 aaKnown RBP20.5■□□□□ 0.87
TPM4-201ENST00000300933 ZNF311Q5JNZ3 666 aa20.5■□□□□ 0.87
TPM4-201ENST00000300933 MLIPQ5VWP3 458 aa20.5■□□□□ 0.87
TPM4-201ENST00000300933 C16orf62Q7Z3J2 963 aa20.5■□□□□ 0.87
TPM4-201ENST00000300933 CDS1Q92903 461 aa20.5■□□□□ 0.87
TPM4-201ENST00000300933 CNPPD1Q9BV87 410 aa20.5■□□□□ 0.87
TPM4-201ENST00000300933 RPRD1BQ9NQG5 326 aaKnown RBP20.5■□□□□ 0.87
TPM4-201ENST00000300933 ABCA7Q8IZY2 2146 aa20.5■□□□□ 0.87
TPM4-201ENST00000300933 ENTPD6O75354 484 aa20.5■□□□□ 0.87
TPM4-201ENST00000300933 SLITRK5O94991 958 aa20.5■□□□□ 0.87
TPM4-201ENST00000300933 THEGLP0DJG4 465 aa20.5■□□□□ 0.87
TPM4-201ENST00000300933 TGM4P49221 684 aa20.5■□□□□ 0.87
TPM4-201ENST00000300933 CD83Q01151 205 aa20.5■□□□□ 0.87
TPM4-201ENST00000300933 ZER1Q7Z7L7 766 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms