RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 CXorf40BQ96DE9 158 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 ORAI3Q9BRQ5 295 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 AIFM2Q9BRQ8 373 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 EMC7Q9NPA0 242 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 CXXC1Q9P0U4 656 aaPredicted RBP13.78□□□□□ -0.2
COL6A2-201ENST00000300527 PGRMC2O15173 223 aa13.77□□□□□ -0.2
COL6A2-201ENST00000300527 PLATP00750 562 aa13.77□□□□□ -0.2
COL6A2-201ENST00000300527 HPXP02790 462 aa13.77□□□□□ -0.2
COL6A2-201ENST00000300527 FGF9P31371 208 aaPredicted RBP13.77□□□□□ -0.2
COL6A2-201ENST00000300527 BLVRAP53004 296 aa13.77□□□□□ -0.2
COL6A2-201ENST00000300527 ZNF671Q8TAW3 534 aa13.77□□□□□ -0.2
COL6A2-201ENST00000300527 ADAMTS19Q8TE59 1207 aa13.77□□□□□ -0.2
COL6A2-201ENST00000300527 SOSTQ9BQB4 213 aa13.77□□□□□ -0.2
COL6A2-201ENST00000300527 GHITMQ9H3K2 345 aa13.77□□□□□ -0.2
COL6A2-201ENST00000300527 P2RX2Q9UBL9 471 aa13.77□□□□□ -0.2
COL6A2-201ENST00000300527 LSM7Q9UK45 103 aaKnown RBP13.77□□□□□ -0.2
COL6A2-201ENST00000300527 AGAP14A8MT82 685 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 TMEM189-UBE2V1I3L0A0 370 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 J3QLW9 94 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 MID1O15344 667 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 CHST10O43529 356 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 EFCAB14O75071 495 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 KDM4BO94953 1096 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 ACSM4P0C7M7 580 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 ZNF19P17023 458 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 CTRB1P17538 263 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 FUT1P19526 365 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 NUP62P37198 522 aaPredicted RBP13.77□□□□□ -0.21
COL6A2-201ENST00000300527 ARHGDIBP52566 201 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 C21orf58P58505 322 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 BTG1P62324 171 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 PUDPQ08623 228 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 TMEM115Q12893 351 aaPredicted RBP13.77□□□□□ -0.21
COL6A2-201ENST00000300527 CTRB2Q6GPI1 263 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 TMEM107Q6UX40 140 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 TRILQ7L0X0 811 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 OR5M3Q8NGP4 307 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 OR56A3Q8NH54 315 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 EFCAB11Q9BUY7 163 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 BTBD1Q9H0C5 482 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 OR2AG1Q9H205 316 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 BRD7Q9NPI1 651 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 TEX10Q9NXF1 929 aaPredicted RBP13.77□□□□□ -0.21
COL6A2-201ENST00000300527 MRPL39Q9NYK5 338 aaKnown RBP13.77□□□□□ -0.21
COL6A2-201ENST00000300527 YIPF1Q9Y548 306 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 COL4A4P53420 1690 aaPredicted RBP13.77□□□□□ -0.21
COL6A2-201ENST00000300527 RPS10-NUDT3A0A1W2PQS6 291 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 MAGEB4O15481 346 aaPredicted RBP13.77□□□□□ -0.21
COL6A2-201ENST00000300527 FZD7O75084 574 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 RGS9O75916 674 aaPredicted RBP13.77□□□□□ -0.21
COL6A2-201ENST00000300527 SLCO2B1O94956 709 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 POU3F2P20265 443 aaPredicted RBP13.77□□□□□ -0.21
COL6A2-201ENST00000300527 TBXA2RP21731 343 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 SNTB2Q13425 540 aaKnown RBP13.77□□□□□ -0.21
COL6A2-201ENST00000300527 KCNC3Q14003 757 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 SLC25A25Q6KCM7 469 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 CDC73Q6P1J9 531 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 DOK4Q8TEW6 326 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 SORCS2Q96PQ0 1159 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 ELAC1Q9H777 363 aaKnown RBP13.77□□□□□ -0.21
COL6A2-201ENST00000300527 MCCC2Q9HCC0 563 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 PHF11Q9UIL8 331 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 ASF1AQ9Y294 204 aa13.77□□□□□ -0.21
COL6A2-201ENST00000300527 DAPL1A0PJW8 107 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 PRAMEF27A3QJZ7 478 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 RNF13O43567 381 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 PIP5K1CO60331 668 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 GALTP07902 379 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 GLULP15104 373 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 CDK5Q00535 292 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 ZNF155Q12901 538 aaPredicted RBP13.76□□□□□ -0.21
COL6A2-201ENST00000300527 STK11Q15831 433 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 ARHGAP15Q53QZ3 475 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 KRT78Q8N1N4 520 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 SIRT6Q8N6T7 355 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 CYB5D2Q8WUJ1 264 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 APOBEC4Q8WW27 367 aaKnown RBP13.76□□□□□ -0.21
COL6A2-201ENST00000300527 NEURL3Q96EH8 262 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 ERMAPQ96PL5 475 aaPredicted RBP13.76□□□□□ -0.21
COL6A2-201ENST00000300527 BBS4Q96RK4 519 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 TMEM175Q9BSA9 504 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 GSX2Q9BZM3 304 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 PPA2Q9H2U2 334 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 Q9Y3F1 56 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 TCRBV16S1A1N1A0A5B0 115 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 KLHL18O94889 574 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 AKR1D1P51857 326 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 GAS1P54826 345 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 TRIM71Q2Q1W2 868 aaKnown RBP13.76□□□□□ -0.21
COL6A2-201ENST00000300527 NXPE4Q6UWF7 544 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 LRRC28Q86X40 367 aaPredicted RBP13.76□□□□□ -0.21
COL6A2-201ENST00000300527 SERPINA12Q8IW75 414 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 NRMQ8IXM6 262 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 TMEM99Q8N816 258 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 OR4D9Q8NGE8 314 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 OR4Q3Q8NH05 313 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 RPLP0P6Q8NHW5 317 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 RFKQ969G6 155 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 ZG16BQ96DA0 208 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 CXorf58Q96LI9 332 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms