RNA–Protein interactions for RNA: ENST00000299366.11

CDH23-202, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-202ENST00000299366 WSB2Q9NYS7 404 aaPredicted RBP13.97□□□□□ -0.17
CDH23-202ENST00000299366 NDUFAF4Q9P032 175 aa13.97□□□□□ -0.17
CDH23-202ENST00000299366 AKAP7Q9P0M2 348 aaPredicted RBP13.97□□□□□ -0.17
CDH23-202ENST00000299366 PHIPQ8WWQ0 1821 aa13.97□□□□□ -0.17
CDH23-202ENST00000299366 UNCXA6NJT0 531 aa13.97□□□□□ -0.17
CDH23-202ENST00000299366 CCDC85CA6NKD9 419 aa13.97□□□□□ -0.17
CDH23-202ENST00000299366 DOK2O60496 412 aa13.97□□□□□ -0.17
CDH23-202ENST00000299366 JRKO75564 520 aa13.97□□□□□ -0.17
CDH23-202ENST00000299366 F11P03951 625 aa13.97□□□□□ -0.17
CDH23-202ENST00000299366 WDR5P61964 334 aaKnown RBP13.97□□□□□ -0.17
CDH23-202ENST00000299366 SELENBP1Q13228 472 aa13.97□□□□□ -0.17
CDH23-202ENST00000299366 RUNX3Q13761 415 aa13.97□□□□□ -0.17
CDH23-202ENST00000299366 ITPRIPL2Q3MIP1 535 aa13.97□□□□□ -0.17
CDH23-202ENST00000299366 OR5M10Q6IEU7 315 aa13.97□□□□□ -0.17
CDH23-202ENST00000299366 KCTD9Q7L273 389 aa13.97□□□□□ -0.17
CDH23-202ENST00000299366 PEG10Q86TG7 708 aaKnown RBP13.97□□□□□ -0.17
CDH23-202ENST00000299366 REM2Q8IYK8 340 aaPredicted RBP13.97□□□□□ -0.17
CDH23-202ENST00000299366 FRMD1Q8N878 549 aa13.97□□□□□ -0.17
CDH23-202ENST00000299366 POGLUT1Q8NBL1 392 aa13.97□□□□□ -0.17
CDH23-202ENST00000299366 CDS1Q92903 461 aa13.97□□□□□ -0.17
CDH23-202ENST00000299366 TGM7Q96PF1 710 aa13.97□□□□□ -0.17
CDH23-202ENST00000299366 GPR174Q9BXC1 333 aa13.97□□□□□ -0.17
CDH23-202ENST00000299366 PLEKHA6Q9Y2H5 1048 aa13.97□□□□□ -0.17
CDH23-202ENST00000299366 GRIP1Q9Y3R0 1128 aa13.97□□□□□ -0.17
CDH23-202ENST00000299366 ZNF888P0CJ79 500 aaPredicted RBP13.96□□□□□ -0.17
CDH23-202ENST00000299366 STOMP27105 288 aa13.96□□□□□ -0.17
CDH23-202ENST00000299366 METAP1P53582 386 aa13.96□□□□□ -0.17
CDH23-202ENST00000299366 PPP3R1P63098 170 aa13.96□□□□□ -0.17
CDH23-202ENST00000299366 KEAP1Q14145 624 aa13.96□□□□□ -0.17
CDH23-202ENST00000299366 C1orf189Q5VU69 101 aa13.96□□□□□ -0.17
CDH23-202ENST00000299366 DNAJC5GQ8N7S2 189 aa13.96□□□□□ -0.17
CDH23-202ENST00000299366 COQ8AQ8NI60 647 aa13.96□□□□□ -0.17
CDH23-202ENST00000299366 SPRYD4Q8WW59 207 aaPredicted RBP13.96□□□□□ -0.17
CDH23-202ENST00000299366 SMARCD2Q92925 531 aa13.96□□□□□ -0.17
CDH23-202ENST00000299366 TESCQ96BS2 214 aa13.96□□□□□ -0.17
CDH23-202ENST00000299366 DTD2Q96FN9 168 aa13.96□□□□□ -0.17
CDH23-202ENST00000299366 TRIB3Q96RU7 358 aa13.96□□□□□ -0.17
CDH23-202ENST00000299366 NTN4Q9HB63 628 aa13.96□□□□□ -0.17
CDH23-202ENST00000299366 THSD1Q9NS62 852 aa13.96□□□□□ -0.17
CDH23-202ENST00000299366 DNMT3BQ9UBC3 853 aaKnown RBP13.96□□□□□ -0.17
CDH23-202ENST00000299366 UNC13CQ8NB66 2214 aa13.96□□□□□ -0.17
CDH23-202ENST00000299366 C1orf226A1L170 272 aa13.96□□□□□ -0.17
CDH23-202ENST00000299366 SCDO00767 359 aa13.96□□□□□ -0.17
CDH23-202ENST00000299366 ZNF432O94892 652 aa13.96□□□□□ -0.17
CDH23-202ENST00000299366 TSPAN12O95859 305 aa13.96□□□□□ -0.17
CDH23-202ENST00000299366 PLATP00750 562 aa13.96□□□□□ -0.17
CDH23-202ENST00000299366 LIPCP11150 499 aa13.96□□□□□ -0.17
CDH23-202ENST00000299366 MYOGP15173 224 aa13.96□□□□□ -0.17
CDH23-202ENST00000299366 DDCP20711 480 aa13.96□□□□□ -0.17
CDH23-202ENST00000299366 MLLT3P42568 568 aaPredicted RBP13.96□□□□□ -0.17
CDH23-202ENST00000299366 SLC9B2Q86UD5 537 aa13.96□□□□□ -0.17
CDH23-202ENST00000299366 PTRH1Q86Y79 214 aaKnown RBP13.96□□□□□ -0.17
CDH23-202ENST00000299366 LINC00471Q8N535 108 aa13.96□□□□□ -0.17
CDH23-202ENST00000299366 SYT14Q8NB59 555 aa13.96□□□□□ -0.17
CDH23-202ENST00000299366 NLGN4YQ8NFZ3 816 aaPredicted RBP13.96□□□□□ -0.17
CDH23-202ENST00000299366 FGF13Q92913 245 aa13.96□□□□□ -0.17
CDH23-202ENST00000299366 COPS7AQ9UBW8 275 aa13.96□□□□□ -0.17
CDH23-202ENST00000299366 PFDN2Q9UHV9 154 aa13.96□□□□□ -0.17
CDH23-202ENST00000299366 B3GNT3Q9Y2A9 372 aa13.96□□□□□ -0.17
CDH23-202ENST00000299366 POLEQ07864 2286 aa13.96□□□□□ -0.18
CDH23-202ENST00000299366 TVP23AA6NH52 213 aa13.96□□□□□ -0.18
CDH23-202ENST00000299366 L7N2F9 121 aa13.96□□□□□ -0.18
CDH23-202ENST00000299366 RFXAPO00287 272 aa13.96□□□□□ -0.18
CDH23-202ENST00000299366 F8A1P23610 371 aa13.96□□□□□ -0.18
CDH23-202ENST00000299366 VEGFBP49765 207 aa13.96□□□□□ -0.18
CDH23-202ENST00000299366 WNT4P56705 351 aa13.96□□□□□ -0.18
CDH23-202ENST00000299366 CLDN12P56749 244 aa13.96□□□□□ -0.18
CDH23-202ENST00000299366 OC90Q02509 493 aaPredicted RBP13.96□□□□□ -0.18
CDH23-202ENST00000299366 AGAP7PQ5VUJ5 663 aa13.96□□□□□ -0.18
CDH23-202ENST00000299366 MEDAGQ5VYS4 303 aa13.96□□□□□ -0.18
CDH23-202ENST00000299366 HTR3DQ70Z44 454 aa13.96□□□□□ -0.18
CDH23-202ENST00000299366 IQCF2Q8IXL9 164 aa13.96□□□□□ -0.18
CDH23-202ENST00000299366 SLC41A3Q96GZ6 507 aa13.96□□□□□ -0.18
CDH23-202ENST00000299366 PDLIM5Q96HC4 596 aaKnown RBP13.96□□□□□ -0.18
CDH23-202ENST00000299366 LMF1Q96S06 567 aa13.96□□□□□ -0.18
CDH23-202ENST00000299366 LAMP5Q9UJQ1 280 aa13.96□□□□□ -0.18
CDH23-202ENST00000299366 FER1L6Q2WGJ9 1857 aa13.95□□□□□ -0.18
CDH23-202ENST00000299366 SCN3AQ9NY46 2000 aa13.95□□□□□ -0.18
CDH23-202ENST00000299366 SMLR1H3BR10 107 aa13.95□□□□□ -0.18
CDH23-202ENST00000299366 RNASET2O00584 256 aaKnown RBP13.95□□□□□ -0.18
CDH23-202ENST00000299366 DNASE1P24855 282 aa13.95□□□□□ -0.18
CDH23-202ENST00000299366 SSTR2P30874 369 aa13.95□□□□□ -0.18
CDH23-202ENST00000299366 IRS1P35568 1242 aa13.95□□□□□ -0.18
CDH23-202ENST00000299366 MCCD1P59942 119 aaPredicted RBP13.95□□□□□ -0.18
CDH23-202ENST00000299366 HNRNPA1L2Q32P51 320 aaKnown RBP13.95□□□□□ -0.18
CDH23-202ENST00000299366 SLCO4C1Q6ZQN7 724 aa13.95□□□□□ -0.18
CDH23-202ENST00000299366 CSNK1A1LQ8N752 337 aa13.95□□□□□ -0.18
CDH23-202ENST00000299366 LSM14AQ8ND56 463 aaKnown RBP13.95□□□□□ -0.18
CDH23-202ENST00000299366 NRTNQ99748 197 aa13.95□□□□□ -0.18
CDH23-202ENST00000299366 TAPBPLQ9BX59 468 aa13.95□□□□□ -0.18
CDH23-202ENST00000299366 LGR4Q9BXB1 951 aa13.95□□□□□ -0.18
CDH23-202ENST00000299366 RANGRFQ9HD47 186 aaPredicted RBP13.95□□□□□ -0.18
CDH23-202ENST00000299366 C14orf105Q9NVL8 296 aa13.95□□□□□ -0.18
CDH23-202ENST00000299366 NOX1Q9Y5S8 564 aa13.95□□□□□ -0.18
CDH23-202ENST00000299366 VEGFDO43915 354 aa13.95□□□□□ -0.18
CDH23-202ENST00000299366 CPNE6O95741 557 aa13.95□□□□□ -0.18
CDH23-202ENST00000299366 RENP00797 406 aa13.95□□□□□ -0.18
CDH23-202ENST00000299366 PCSK2P16519 638 aa13.95□□□□□ -0.18
CDH23-202ENST00000299366 RPL34P49207 117 aaKnown RBP13.95□□□□□ -0.18
CDH23-202ENST00000299366 CYHR1Q6ZMK1 362 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms