RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 BRD7Q9NPI1 651 aa12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 MRPL39Q9NYK5 338 aaKnown RBP12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 ING4Q9UNL4 249 aa12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 A0A075B6Q4 140 aa12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 DHFRP00374 187 aa12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 ARSBP15848 533 aa12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 KCNJ5P48544 419 aa12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 CENPAP49450 140 aa12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 PRSS45Q7RTY3 260 aa12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 ADIPOR2Q86V24 386 aa12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 RAB42Q8N4Z0 105 aa12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 LRRC20Q8TCA0 184 aa12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 CLEC4MQ9H2X3 399 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 TMEM38AQ9H6F2 299 aa12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 SLC35C2Q9NQQ7 365 aa12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 GPR55Q9Y2T6 319 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 CHURC1-FNTBB4DL54 471 aa12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 ERVH48-1M5A8F1 160 aa12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 GATBO75879 557 aaKnown RBP12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 HRGP04196 525 aa12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 ATF4P18848 351 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 CCR6P51684 374 aa12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 AP2S1P53680 142 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 VSX2P58304 361 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 DSG2Q14126 1118 aa12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 NTRK2Q16620 822 aa12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 POMZP3Q6PJE2 187 aa12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 TCEAL8Q8IYN2 117 aa12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 PIAS4Q8N2W9 510 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 OR52L1Q8NGH7 329 aa12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 TMEM255BQ8WV15 326 aa12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 PDXPQ96GD0 296 aa12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 SPATA9Q9BWV2 254 aa12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 LGR4Q9BXB1 951 aa12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 ZNF780BQ9Y6R6 833 aa12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 SPAG17Q6Q759 2223 aa12.51□□□□□ -0.41
TNFRSF21-201ENST00000296861 CHRM4P08173 479 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 MSL3P1P0C860 447 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 SLC1A3P43003 542 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 CCR4P51679 360 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 OC90Q02509 493 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 PSRC1Q6PGN9 363 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 GDPD1Q8N9F7 314 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 OR8K3Q8NH51 312 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 OR8D1Q8WZ84 308 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 SPATA5L1Q9BVQ7 753 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 GSDMCQ9BYG8 508 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 NXF2Q9GZY0 626 aaKnown RBP12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 TAS2R7Q9NYW3 318 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 PLEKHB1Q9UF11 243 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 DPP7Q9UHL4 492 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 ATG4BQ9Y4P1 393 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 PRODHO43272 600 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 RPP14O95059 124 aaKnown RBP12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 GIFP27352 417 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 ADAM15Q13444 863 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 MEDAGQ5VYS4 303 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 LINGO2Q7L985 606 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 LAS2Q8IYD9 372 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 SLC39A11Q8N1S5 342 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 OR6K6Q8NGW6 343 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 UPRTQ96BW1 309 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 TBC1D20Q96BZ9 403 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 SIGLEC11Q96RL6 698 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 LYSMD1Q96S90 227 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 GPR174Q9BXC1 333 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 ATP13A2Q9NQ11 1180 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 NDUFB11Q9NX14 153 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 DEC1Q9P2X7 70 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 REV1Q9UBZ9 1251 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 MN1Q10571 1320 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 IGLV3-16A0A075B6K0 115 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 A0A1B0GVT2 93 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 ABHD14A-ACY1A0A1B0GW23 586 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 CIB4A0PJX0 185 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 ANKRD61A6NGH8 418 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 POM121CA8CG34 1229 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 ELK1P19419 428 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 CLDN12P56749 244 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 RAB14P61106 215 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 GXYLT1Q4G148 440 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 TOR1AIP1Q5JTV8 583 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 FAM98AQ8NCA5 519 aaKnown RBP12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 NUP43Q8NFH3 380 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 RAD9AQ99638 391 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 MKRN2Q9H000 416 aaKnown RBP12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 C6orf106Q9H6K1 298 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 B3GAT2Q9NPZ5 323 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 SEMA4GQ9NTN9 838 aa12.5□□□□□ -0.41
TNFRSF21-201ENST00000296861 KIAA0355O15063 1070 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 GREM1O60565 184 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 B4GALT2O60909 372 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 MT-ND4P03905 459 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 LAMP2P13473 410 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 PRKACBP22694 351 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 PRPH2P23942 346 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 RPL4P36578 427 aaKnown RBP12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 SEC13P55735 322 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 PPP3R1P63098 170 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 DEFB134Q4QY38 66 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms