RNA–Protein interactions for RNA: ENST00000264107.11

ITGA6-201, Transcript of integrin subunit alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA6, Length 5,618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-201ENST00000264107 RGMBQ6NW40 437 aa17.1■□□□□ 0.33
ITGA6-201ENST00000264107 SLC9B2Q86UD5 537 aa17.1■□□□□ 0.33
ITGA6-201ENST00000264107 GPR26Q8NDV2 337 aa17.1■□□□□ 0.33
ITGA6-201ENST00000264107 FAM46AQ96IP4 442 aaKnown RBP17.1■□□□□ 0.33
ITGA6-201ENST00000264107 MRI1Q9BV20 369 aa17.1■□□□□ 0.33
ITGA6-201ENST00000264107 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.1■□□□□ 0.33
ITGA6-201ENST00000264107 C12orf10Q9HB07 376 aa17.1■□□□□ 0.33
ITGA6-201ENST00000264107 ADARB2Q9NS39 739 aaKnown RBP17.1■□□□□ 0.33
ITGA6-201ENST00000264107 MYBPHLA2RUH7 354 aa17.1■□□□□ 0.33
ITGA6-201ENST00000264107 KNG1P01042 644 aa17.1■□□□□ 0.33
ITGA6-201ENST00000264107 SLC10A2Q12908 348 aaPredicted RBP17.1■□□□□ 0.33
ITGA6-201ENST00000264107 ZBTB37Q5TC79 503 aa17.1■□□□□ 0.33
ITGA6-201ENST00000264107 SMIM15Q7Z3B0 74 aa17.1■□□□□ 0.33
ITGA6-201ENST00000264107 TMEM173Q86WV6 379 aaPredicted RBP17.1■□□□□ 0.33
ITGA6-201ENST00000264107 URM1Q9BTM9 101 aaKnown RBP17.1■□□□□ 0.33
ITGA6-201ENST00000264107 OR2A25A4D2G3 310 aa17.09■□□□□ 0.33
ITGA6-201ENST00000264107 CDC123O75794 336 aaPredicted RBP17.09■□□□□ 0.33
ITGA6-201ENST00000264107 FGF4P08620 206 aa17.09■□□□□ 0.33
ITGA6-201ENST00000264107 ADARB1P78563 741 aaKnown RBP17.09■□□□□ 0.33
ITGA6-201ENST00000264107 HTD2P86397 168 aa17.09■□□□□ 0.33
ITGA6-201ENST00000264107 TEKQ02763 1124 aa17.09■□□□□ 0.33
ITGA6-201ENST00000264107 PRAMEF14Q5SWL7 426 aa17.09■□□□□ 0.33
ITGA6-201ENST00000264107 ZNF300Q96RE9 604 aaPredicted RBP17.09■□□□□ 0.33
ITGA6-201ENST00000264107 SLC38A3Q99624 504 aa17.09■□□□□ 0.33
ITGA6-201ENST00000264107 SCG5P05408 212 aa17.09■□□□□ 0.33
ITGA6-201ENST00000264107 CTHP32929 405 aa17.09■□□□□ 0.33
ITGA6-201ENST00000264107 MEOX2P50222 304 aa17.09■□□□□ 0.33
ITGA6-201ENST00000264107 ZNF33AQ06730 810 aa17.09■□□□□ 0.33
ITGA6-201ENST00000264107 SOHLH1Q5JUK2 328 aa17.09■□□□□ 0.33
ITGA6-201ENST00000264107 ISCA2Q86U28 154 aa17.09■□□□□ 0.33
ITGA6-201ENST00000264107 FBXO15Q8NCQ5 510 aaPredicted RBP17.09■□□□□ 0.33
ITGA6-201ENST00000264107 NAXEQ8NCW5 288 aa17.09■□□□□ 0.33
ITGA6-201ENST00000264107 PLPP5Q8NEB5 264 aa17.09■□□□□ 0.33
ITGA6-201ENST00000264107 LINC01599Q8WXQ3 324 aa17.09■□□□□ 0.33
ITGA6-201ENST00000264107 TXN2Q99757 166 aa17.09■□□□□ 0.33
ITGA6-201ENST00000264107 CPED1A4D0V7 1026 aa17.09■□□□□ 0.33
ITGA6-201ENST00000264107 GDNFP39905 211 aa17.09■□□□□ 0.33
ITGA6-201ENST00000264107 HTR6P50406 440 aa17.09■□□□□ 0.33
ITGA6-201ENST00000264107 CCR6P51684 374 aa17.09■□□□□ 0.33
ITGA6-201ENST00000264107 SLC10A6Q3KNW5 377 aa17.09■□□□□ 0.33
ITGA6-201ENST00000264107 C7orf61Q8IZ16 206 aa17.09■□□□□ 0.33
ITGA6-201ENST00000264107 SLC38A6Q8IZM9 456 aa17.09■□□□□ 0.33
ITGA6-201ENST00000264107 PROKR1Q8TCW9 393 aa17.09■□□□□ 0.33
ITGA6-201ENST00000264107 GAPDHSO14556 408 aaPredicted RBP17.09■□□□□ 0.33
ITGA6-201ENST00000264107 DFFBO76075 338 aa17.09■□□□□ 0.33
ITGA6-201ENST00000264107 HOXA10P31260 410 aaPredicted RBP17.09■□□□□ 0.33
ITGA6-201ENST00000264107 RBMS2Q15434 407 aaKnown RBP17.09■□□□□ 0.33
ITGA6-201ENST00000264107 OR11A1Q9GZK7 315 aa17.09■□□□□ 0.33
ITGA6-201ENST00000264107 PATZ1Q9HBE1 687 aaKnown RBP17.09■□□□□ 0.33
ITGA6-201ENST00000264107 GPRC5BQ9NZH0 403 aa17.09■□□□□ 0.33
ITGA6-201ENST00000264107 ABRACLQ9P1F3 81 aa17.09■□□□□ 0.33
ITGA6-201ENST00000264107 CLDN4O14493 209 aa17.08■□□□□ 0.33
ITGA6-201ENST00000264107 CTSEP14091 401 aa17.08■□□□□ 0.33
ITGA6-201ENST00000264107 FOXA1P55317 472 aa17.08■□□□□ 0.33
ITGA6-201ENST00000264107 PER3P56645 1201 aa17.08■□□□□ 0.33
ITGA6-201ENST00000264107 KCNIP4Q6PIL6 250 aa17.08■□□□□ 0.33
ITGA6-201ENST00000264107 Q6ZPB1 254 aaPredicted RBP17.08■□□□□ 0.33
ITGA6-201ENST00000264107 SIAH3Q8IW03 269 aa17.08■□□□□ 0.33
ITGA6-201ENST00000264107 ZNF778Q96MU6 729 aa17.08■□□□□ 0.33
ITGA6-201ENST00000264107 PCDHGA5Q9Y5G8 931 aa17.08■□□□□ 0.33
ITGA6-201ENST00000264107 TMEM72A0PK05 275 aa17.08■□□□□ 0.33
ITGA6-201ENST00000264107 IMPA2O14732 288 aa17.08■□□□□ 0.33
ITGA6-201ENST00000264107 ZP3P21754 424 aa17.08■□□□□ 0.33
ITGA6-201ENST00000264107 MAT2AP31153 395 aaKnown RBP17.08■□□□□ 0.33
ITGA6-201ENST00000264107 GP2P55259 537 aaKnown RBP17.08■□□□□ 0.33
ITGA6-201ENST00000264107 OR4D10Q8NGI6 311 aa17.08■□□□□ 0.33
ITGA6-201ENST00000264107 SLC35F5Q8WV83 523 aa17.08■□□□□ 0.33
ITGA6-201ENST00000264107 OR5P2Q8WZ92 322 aa17.08■□□□□ 0.33
ITGA6-201ENST00000264107 RXFP3Q9NSD7 469 aa17.08■□□□□ 0.33
ITGA6-201ENST00000264107 NLE1Q9NVX2 485 aaPredicted RBP17.08■□□□□ 0.33
ITGA6-201ENST00000264107 KIF25Q9UIL4 384 aa17.08■□□□□ 0.33
ITGA6-201ENST00000264107 ZNF850A8MQ14 1090 aa17.08■□□□□ 0.32
ITGA6-201ENST00000264107 WNT10BO00744 389 aa17.08■□□□□ 0.32
ITGA6-201ENST00000264107 SLC10A3P09131 477 aa17.08■□□□□ 0.32
ITGA6-201ENST00000264107 OR2B8PP59922 312 aa17.08■□□□□ 0.32
ITGA6-201ENST00000264107 SLC6A19Q695T7 634 aa17.08■□□□□ 0.32
ITGA6-201ENST00000264107 AGTRAPQ6RW13 159 aa17.08■□□□□ 0.32
ITGA6-201ENST00000264107 LMLNQ96KR4 655 aa17.08■□□□□ 0.32
ITGA6-201ENST00000264107 PRRT1Q99946 306 aa17.08■□□□□ 0.32
ITGA6-201ENST00000264107 ORAI3Q9BRQ5 295 aa17.08■□□□□ 0.32
ITGA6-201ENST00000264107 SLC25A18Q9H1K4 315 aa17.08■□□□□ 0.32
ITGA6-201ENST00000264107 TAS2R16Q9NYV7 291 aa17.08■□□□□ 0.32
ITGA6-201ENST00000264107 CYB5R1Q9UHQ9 305 aa17.08■□□□□ 0.32
ITGA6-201ENST00000264107 ERI3O43414 337 aaKnown RBP17.08■□□□□ 0.32
ITGA6-201ENST00000264107 C8orf89P0DMQ9 161 aa17.08■□□□□ 0.32
ITGA6-201ENST00000264107 BDKRB1P46663 353 aa17.08■□□□□ 0.32
ITGA6-201ENST00000264107 TAS2R20P59543 309 aa17.08■□□□□ 0.32
ITGA6-201ENST00000264107 PSPHP78330 225 aa17.08■□□□□ 0.32
ITGA6-201ENST00000264107 TLE3Q04726 772 aa17.08■□□□□ 0.32
ITGA6-201ENST00000264107 GALNT13Q8IUC8 556 aa17.08■□□□□ 0.32
ITGA6-201ENST00000264107 IL17RDQ8NFM7 739 aa17.08■□□□□ 0.32
ITGA6-201ENST00000264107 TTLQ8NG68 377 aa17.08■□□□□ 0.32
ITGA6-201ENST00000264107 MOAP1Q96BY2 351 aa17.08■□□□□ 0.32
ITGA6-201ENST00000264107 GAL3ST4Q96RP7 486 aa17.08■□□□□ 0.32
ITGA6-201ENST00000264107 C20orf24Q9BUV8 137 aa17.08■□□□□ 0.32
ITGA6-201ENST00000264107 GAREM1Q9H706 876 aa17.08■□□□□ 0.32
ITGA6-201ENST00000264107 ARNT2Q9HBZ2 717 aa17.08■□□□□ 0.32
ITGA6-201ENST00000264107 UBE2J1Q9Y385 318 aaPredicted RBP17.08■□□□□ 0.32
ITGA6-201ENST00000264107 TMX2-CTNND1H3BSU7 103 aa17.07■□□□□ 0.32
ITGA6-201ENST00000264107 ATG12O94817 140 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms