RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 SOWAHAQ2M3V2 549 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 SLX4IPQ5VYV7 408 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 AGTRAPQ6RW13 159 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 PQLC3Q8N755 202 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 C14orf79Q96F83 325 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 HS6ST2Q96MM7 605 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 SIX4Q9UIU6 781 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 DOT1LQ8TEK3 1739 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 PIP5K1CO60331 668 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 CD1DP15813 335 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 C21orf33P30042 268 aaPredicted RBP12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 P2RX3P56373 397 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 IRF4Q15306 451 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 SMIM15Q7Z3B0 74 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 ZNF439Q8NDP4 499 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 NANPQ8TBE9 248 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 HAVCR2Q8TDQ0 301 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 FBXL2Q9UKC9 423 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 RASD1Q9Y272 281 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 ZFP37Q9Y6Q3 630 aaPredicted RBP12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 CXCL14O95715 111 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 BPIP17213 487 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 RBMS1P29558 406 aaKnown RBP12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 GALK2Q01415 458 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 TMEM135Q86UB9 458 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 CCDC71LQ8N9Z2 235 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 ZBTB44Q8NCP5 570 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 CHTF18Q8WVB6 975 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 GLYATL1Q969I3 302 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 KIAA1143Q96AT1 154 aaPredicted RBP12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 RNF39Q9H2S5 420 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 ACKR4Q9NPB9 350 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 RXFP3Q9NSD7 469 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 CACNG4Q9UBN1 327 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 ICKQ9UPZ9 632 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 MDFIC2A0A1B0GVS7 189 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 KHNYNO15037 678 aaKnown RBP12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 PIGRP01833 764 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 SERPINA7P05543 415 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 SYPP08247 313 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 GABRR2P28476 465 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 RAB40BQ12829 278 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 OTOP2Q7RTS6 562 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 CLEC4CQ8WTT0 213 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 MITD1Q8WV92 249 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 DPH2Q9BQC3 489 aaPredicted RBP12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 TSPAN10Q9H1Z9 355 aaPredicted RBP12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 FCF1Q9Y324 198 aaKnown RBP12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 C17orf113A0A1B0GUU1 675 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 FBXO24O75426 580 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 DFFBO76075 338 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 SPI1P17947 270 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 NR0B1P51843 470 aaKnown RBP12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 KCNC3Q14003 757 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 DHCR24Q15392 516 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 CHRNA6Q15825 494 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 STEAP4Q687X5 459 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 OR10K2Q6IF99 312 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 LCN10Q6JVE6 187 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 AMZ2Q86W34 360 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 AVL9Q8NBF6 648 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 TM9SF4Q92544 642 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 SLAMF9Q96A28 289 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 ZNF587Q96SQ5 575 aaPredicted RBP12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 ZNF175Q9Y473 711 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 AHDC1Q5TGY3 1603 aaPredicted RBP12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 SCDO00767 359 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 MT-CO2P00403 227 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 FABP6P51161 128 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 FXNQ16595 210 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 YIF1BQ5BJH7 314 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 C17orf107Q6ZR85 190 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 B3GNT8Q7Z7M8 397 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 TMEM173Q86WV6 379 aaPredicted RBP12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 SMPDL3AQ92484 453 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 FBXL18Q96ME1 805 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 OR11A1Q9GZK7 315 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 SCPEP1Q9HB40 452 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 PIGVQ9NUD9 493 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 RCE1Q9Y256 329 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 PRELID3BQ9Y3B1 194 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 H2BFMP0C1H6 154 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 CPN1P15169 458 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 MAT2AP31153 395 aaKnown RBP12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 AKR1C2P52895 323 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 RACK1P63244 317 aaKnown RBP12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 BEX5Q5H9J7 111 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 LIPJQ5W064 366 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 CD276Q5ZPR3 534 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 DPY19L4Q7Z388 723 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 CLDN22Q8N7P3 220 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 SEMA6DQ8NFY4 1073 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 RNF128Q8TEB7 428 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 SLC22A18Q96BI1 424 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 ALG8Q9BVK2 526 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 C11orf54Q9H0W9 315 aaPredicted RBP12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 DCAF13Q9NV06 445 aaKnown RBP12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 ASH2LQ9UBL3 628 aa12.49□□□□□ -0.41
PCDHGA3-201ENST00000253812 AK6Q9Y3D8 172 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms