RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 OR4K14Q8NGD5 310 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 OR52P1PQ8NH57 321 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 PIK3R3Q92569 461 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 TMEM203Q969S6 136 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 OTULINQ96BN8 352 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 CNPPD1Q9BV87 410 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 HRASLS2Q9NWW9 162 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 CLCA2Q9UQC9 943 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 TNFRSF10AO00220 468 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 PIP5K1CO60331 668 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 NDUFS1P28331 727 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 GIPRP48546 466 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 SHC2P98077 582 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 DUSP5Q16690 384 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 PLEKHM3Q6ZWE6 761 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 FAM160A2Q8N612 972 aaPredicted RBP14.74□□□□□ -0.05
LRFN1-201ENST00000248668 ACTRT3Q9BYD9 372 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 FBXO34Q9NWN3 711 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 LYARQ9NX58 379 aaKnown RBP14.74□□□□□ -0.05
LRFN1-201ENST00000248668 SMIM30A4D0T7 59 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 SH3D21A4FU49 640 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 B3GALT2O43825 422 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 CYP7B1O75881 506 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 SEMA4FO95754 770 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 SUZ12Q15022 739 aaKnown RBP14.74□□□□□ -0.05
LRFN1-201ENST00000248668 EXOSC7Q15024 291 aaKnown RBP14.74□□□□□ -0.05
LRFN1-201ENST00000248668 C12orf73Q69YU5 71 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 OR8J1Q8NGP2 316 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 EFHD2Q96C19 240 aaPredicted RBP14.74□□□□□ -0.05
LRFN1-201ENST00000248668 PINK1Q9BXM7 581 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 C2orf42Q9NWW7 574 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 KCMF1Q9P0J7 381 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 CAB39Q9Y376 341 aaPredicted RBP14.74□□□□□ -0.05
LRFN1-201ENST00000248668 TBX1O43435 398 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 CSO75390 466 aaKnown RBP14.73□□□□□ -0.05
LRFN1-201ENST00000248668 GKN3PP0CG01 181 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 AKT2P31751 481 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 TGM4P49221 684 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 FAM214AQ32MH5 1076 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 AGAP7PQ5VUJ5 663 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 MFSD12Q6NUT3 480 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 FAM92BQ6ZTR7 304 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 USP30Q70CQ3 517 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 ZNF367Q7RTV3 350 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 TAF8Q7Z7C8 310 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 OR8D4Q8NGM9 314 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 LILRB4Q8NHJ6 448 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 SLC22A18Q96BI1 424 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 OPALINQ96PE5 141 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 SARGQ9BW04 601 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 SLC25A19Q9HC21 320 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 CPNE7Q9UBL6 633 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 A6NCN8 305 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 TMCC2O75069 709 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 GPX5O75715 221 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 NT5EP21589 574 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 VSX2P58304 361 aaPredicted RBP14.73□□□□□ -0.05
LRFN1-201ENST00000248668 COPZ1P61923 177 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 GNA13Q14344 377 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 ENTPD8Q5MY95 495 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 LIPKQ5VXJ0 399 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 SLC30A6Q6NXT4 461 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 DTX3Q8N9I9 347 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 S100ZQ8WXG8 99 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 CDADC1Q9BWV3 514 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 CDCA4Q9BXL8 241 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 POLR2J2Q9GZM3 115 aaKnown RBP14.73□□□□□ -0.05
LRFN1-201ENST00000248668 CNOT2Q9NZN8 540 aaKnown RBP14.73□□□□□ -0.05
LRFN1-201ENST00000248668 DAPP1Q9UN19 280 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 WDR45Q9Y484 360 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 SEC16AO15027 2179 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 METTL15A6NJ78 407 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 GTF2E2P29084 291 aaKnown RBP14.73□□□□□ -0.05
LRFN1-201ENST00000248668 MADCAM1Q13477 382 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 KIR2DS3Q14952 304 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 FBXO43Q4G163 708 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 SYT14P1Q58G82 188 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 FIGNL1Q6PIW4 674 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 GALNT12Q8IXK2 581 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 SLC37A2Q8TED4 501 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 TMEM255BQ8WV15 326 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 RERGQ96A58 199 aaPredicted RBP14.73□□□□□ -0.05
LRFN1-201ENST00000248668 CRELD1Q96HD1 420 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 TMEM80Q96HE8 168 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 MCHR1Q99705 422 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 FBXO8Q9NRD0 319 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 B3GNT3Q9Y2A9 372 aa14.73□□□□□ -0.05
LRFN1-201ENST00000248668 CACNA1IQ9P0X4 2223 aa14.72□□□□□ -0.05
LRFN1-201ENST00000248668 FGF17O60258 216 aa14.72□□□□□ -0.05
LRFN1-201ENST00000248668 APBB3O95704 486 aa14.72□□□□□ -0.05
LRFN1-201ENST00000248668 GNSP15586 552 aa14.72□□□□□ -0.05
LRFN1-201ENST00000248668 FUT1P19526 365 aa14.72□□□□□ -0.05
LRFN1-201ENST00000248668 SLC15A1P46059 708 aa14.72□□□□□ -0.05
LRFN1-201ENST00000248668 SNRPGP62308 76 aaKnown RBP14.72□□□□□ -0.05
LRFN1-201ENST00000248668 MXD1Q05195 221 aa14.72□□□□□ -0.05
LRFN1-201ENST00000248668 FRRS1Q6ZNA5 592 aa14.72□□□□□ -0.05
LRFN1-201ENST00000248668 NRMQ8IXM6 262 aa14.72□□□□□ -0.05
LRFN1-201ENST00000248668 ZNF614Q8N883 585 aa14.72□□□□□ -0.05
LRFN1-201ENST00000248668 ZFYVE21Q9BQ24 234 aa14.72□□□□□ -0.05
LRFN1-201ENST00000248668 QPCTLQ9NXS2 382 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms