RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 KLHL36Q8N4N3 616 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 CLDN22Q8N7P3 220 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 LRRC20Q8TCA0 184 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 DPH1Q9BZG8 443 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 MKRN2Q9H000 416 aaKnown RBP15.84■□□□□ 0.13
SGPP1-201ENST00000247225 SPHK2Q9NRA0 654 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 NDUFS4O43181 175 aa15.83■□□□□ 0.13
SGPP1-201ENST00000247225 TRHRP34981 398 aaPredicted RBP15.83■□□□□ 0.13
SGPP1-201ENST00000247225 GCGRP47871 477 aa15.83■□□□□ 0.13
SGPP1-201ENST00000247225 ABATP80404 500 aa15.83■□□□□ 0.13
SGPP1-201ENST00000247225 TGM3Q08188 693 aa15.83■□□□□ 0.13
SGPP1-201ENST00000247225 ADAM15Q13444 863 aa15.83■□□□□ 0.13
SGPP1-201ENST00000247225 FAM46CQ5VWP2 391 aa15.83■□□□□ 0.13
SGPP1-201ENST00000247225 METTL3Q86U44 580 aaKnown RBP15.83■□□□□ 0.13
SGPP1-201ENST00000247225 AMZ2Q86W34 360 aa15.83■□□□□ 0.13
SGPP1-201ENST00000247225 NUDT13Q86X67 352 aa15.83■□□□□ 0.13
SGPP1-201ENST00000247225 FAM109AQ8N4B1 249 aa15.83■□□□□ 0.13
SGPP1-201ENST00000247225 FAM26EQ8N5C1 309 aa15.83■□□□□ 0.13
SGPP1-201ENST00000247225 OR9A2Q8NGT5 310 aa15.83■□□□□ 0.13
SGPP1-201ENST00000247225 TMEM163Q8TC26 289 aa15.83■□□□□ 0.13
SGPP1-201ENST00000247225 UBE2E3Q969T4 207 aa15.83■□□□□ 0.13
SGPP1-201ENST00000247225 DNAJA3Q96EY1 480 aa15.83■□□□□ 0.13
SGPP1-201ENST00000247225 CCDC86Q9H6F5 360 aaKnown RBP15.83■□□□□ 0.13
SGPP1-201ENST00000247225 NARFLQ9H6Q4 476 aa15.83■□□□□ 0.13
SGPP1-201ENST00000247225 SIRT3Q9NTG7 399 aaPredicted RBP15.83■□□□□ 0.13
SGPP1-201ENST00000247225 CHST2Q9Y4C5 530 aa15.83■□□□□ 0.13
SGPP1-201ENST00000247225 DAPL1A0PJW8 107 aa15.83■□□□□ 0.12
SGPP1-201ENST00000247225 FOXE1O00358 373 aaPredicted RBP15.83■□□□□ 0.12
SGPP1-201ENST00000247225 CLUP10909 449 aa15.83■□□□□ 0.12
SGPP1-201ENST00000247225 ZNF250P15622 560 aa15.83■□□□□ 0.12
SGPP1-201ENST00000247225 ITGB7P26010 798 aa15.83■□□□□ 0.12
SGPP1-201ENST00000247225 EVX1P49640 407 aa15.83■□□□□ 0.12
SGPP1-201ENST00000247225 PDE7AQ13946 482 aa15.83■□□□□ 0.12
SGPP1-201ENST00000247225 CEACAM19Q7Z692 300 aa15.83■□□□□ 0.12
SGPP1-201ENST00000247225 TMEFF1Q8IYR6 380 aa15.83■□□□□ 0.12
SGPP1-201ENST00000247225 CXorf40BQ96DE9 158 aa15.83■□□□□ 0.12
SGPP1-201ENST00000247225 ZSWIM3Q96MP5 696 aa15.83■□□□□ 0.12
SGPP1-201ENST00000247225 MCHR1Q99705 422 aa15.83■□□□□ 0.12
SGPP1-201ENST00000247225 LGR4Q9BXB1 951 aa15.83■□□□□ 0.12
SGPP1-201ENST00000247225 ZDHHC5Q9C0B5 715 aa15.83■□□□□ 0.12
SGPP1-201ENST00000247225 ING4Q9UNL4 249 aa15.83■□□□□ 0.12
SGPP1-201ENST00000247225 KIAA0355O15063 1070 aa15.83■□□□□ 0.12
SGPP1-201ENST00000247225 MT-ND4P03905 459 aa15.83■□□□□ 0.12
SGPP1-201ENST00000247225 CXCL3P19876 107 aa15.83■□□□□ 0.12
SGPP1-201ENST00000247225 PXNP49023 591 aaPredicted RBP15.83■□□□□ 0.12
SGPP1-201ENST00000247225 PCDH1Q08174 1060 aa15.83■□□□□ 0.12
SGPP1-201ENST00000247225 ZNF628Q5EBL2 1059 aa15.83■□□□□ 0.12
SGPP1-201ENST00000247225 ZNF433Q8N7K0 673 aaPredicted RBP15.83■□□□□ 0.12
SGPP1-201ENST00000247225 PIGXQ8TBF5 258 aa15.83■□□□□ 0.12
SGPP1-201ENST00000247225 SIRT4Q9Y6E7 314 aaPredicted RBP15.83■□□□□ 0.12
SGPP1-201ENST00000247225 SZT2Q5T011 3432 aa15.83■□□□□ 0.12
SGPP1-201ENST00000247225 ZNF860A6NHJ4 632 aa15.82■□□□□ 0.12
SGPP1-201ENST00000247225 ALPPP05187 535 aa15.82■□□□□ 0.12
SGPP1-201ENST00000247225 EIF4EP06730 217 aaKnown RBP15.82■□□□□ 0.12
SGPP1-201ENST00000247225 SAGP10523 405 aaPredicted RBP15.82■□□□□ 0.12
SGPP1-201ENST00000247225 TBXA2RP21731 343 aa15.82■□□□□ 0.12
SGPP1-201ENST00000247225 DUSP2Q05923 314 aa15.82■□□□□ 0.12
SGPP1-201ENST00000247225 ZC3H14Q6PJT7 736 aaKnown RBP15.82■□□□□ 0.12
SGPP1-201ENST00000247225 LUZP2Q86TE4 346 aa15.82■□□□□ 0.12
SGPP1-201ENST00000247225 TCEAL8Q8IYN2 117 aa15.82■□□□□ 0.12
SGPP1-201ENST00000247225 OR4Q3Q8NH05 313 aa15.82■□□□□ 0.12
SGPP1-201ENST00000247225 ZNF671Q8TAW3 534 aa15.82■□□□□ 0.12
SGPP1-201ENST00000247225 MSLNLQ96KJ4 702 aa15.82■□□□□ 0.12
SGPP1-201ENST00000247225 TAS2R7Q9NYW3 318 aa15.82■□□□□ 0.12
SGPP1-201ENST00000247225 KCND3Q9UK17 655 aa15.82■□□□□ 0.12
SGPP1-201ENST00000247225 ENTPD4Q9Y227 616 aa15.82■□□□□ 0.12
SGPP1-201ENST00000247225 ATG4BQ9Y4P1 393 aa15.82■□□□□ 0.12
SGPP1-201ENST00000247225 E9PI62 339 aa15.82■□□□□ 0.12
SGPP1-201ENST00000247225 UBXN7O94888 489 aa15.82■□□□□ 0.12
SGPP1-201ENST00000247225 TP53P04637 393 aaPredicted RBP15.82■□□□□ 0.12
SGPP1-201ENST00000247225 GABRA5P31644 462 aa15.82■□□□□ 0.12
SGPP1-201ENST00000247225 QSOX2Q6ZRP7 698 aa15.82■□□□□ 0.12
SGPP1-201ENST00000247225 PIAS4Q8N2W9 510 aaPredicted RBP15.82■□□□□ 0.12
SGPP1-201ENST00000247225 CEP76Q8TAP6 659 aa15.82■□□□□ 0.12
SGPP1-201ENST00000247225 ZCCHC10Q8TBK6 192 aa15.82■□□□□ 0.12
SGPP1-201ENST00000247225 GRHL3Q8TE85 626 aa15.82■□□□□ 0.12
SGPP1-201ENST00000247225 RGMAQ96B86 450 aa15.82■□□□□ 0.12
SGPP1-201ENST00000247225 TMEM43Q9BTV4 400 aa15.82■□□□□ 0.12
SGPP1-201ENST00000247225 TEX12Q9BXU0 123 aa15.82■□□□□ 0.12
SGPP1-201ENST00000247225 NEUROD4Q9HD90 331 aa15.82■□□□□ 0.12
SGPP1-201ENST00000247225 ATP13A2Q9NQ11 1180 aa15.82■□□□□ 0.12
SGPP1-201ENST00000247225 SLC35C2Q9NQQ7 365 aa15.82■□□□□ 0.12
SGPP1-201ENST00000247225 MAN2C1Q9NTJ4 1040 aa15.82■□□□□ 0.12
SGPP1-201ENST00000247225 PLEKHM1Q9Y4G2 1056 aa15.82■□□□□ 0.12
SGPP1-201ENST00000247225 E9PQ18 207 aa15.81■□□□□ 0.12
SGPP1-201ENST00000247225 QSOX1O00391 747 aa15.81■□□□□ 0.12
SGPP1-201ENST00000247225 GATBO75879 557 aaKnown RBP15.81■□□□□ 0.12
SGPP1-201ENST00000247225 BSGP35613 385 aa15.81■□□□□ 0.12
SGPP1-201ENST00000247225 CCR8P51685 355 aa15.81■□□□□ 0.12
SGPP1-201ENST00000247225 SIGIRRQ6IA17 410 aa15.81■□□□□ 0.12
SGPP1-201ENST00000247225 BHLHB9Q6PI77 547 aa15.81■□□□□ 0.12
SGPP1-201ENST00000247225 TMEM99Q8N816 258 aa15.81■□□□□ 0.12
SGPP1-201ENST00000247225 RASSF5Q8WWW0 418 aa15.81■□□□□ 0.12
SGPP1-201ENST00000247225 RFT1Q96AA3 541 aa15.81■□□□□ 0.12
SGPP1-201ENST00000247225 ORAI3Q9BRQ5 295 aa15.81■□□□□ 0.12
SGPP1-201ENST00000247225 GSDMCQ9BYG8 508 aa15.81■□□□□ 0.12
SGPP1-201ENST00000247225 RNF32Q9H0A6 362 aa15.81■□□□□ 0.12
SGPP1-201ENST00000247225 ZSCAN32Q9NX65 697 aa15.81■□□□□ 0.12
SGPP1-201ENST00000247225 FBXL4Q9UKA2 621 aa15.81■□□□□ 0.12
SGPP1-201ENST00000247225 DSPPQ9NZW4 1301 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms