RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 F3P13726 295 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 TIMP2P16035 220 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 S1PR1P21453 382 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 UPP1Q16831 310 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 TMEM200AQ86VY9 491 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 CSPG4P5Q96PW8 444 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 LMF1Q96S06 567 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 A0A087WUU8 490 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 SMIM28A0A1B0GU29 152 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 H0YAE9 185 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 DHRS4L1P0CG22 281 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 CASP3P42574 277 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 TAF1AQ15573 450 aaPredicted RBP10.56□□□□□ -0.72
MSH6-201ENST00000234420 OR5H2Q8NGV7 314 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 OR1S1Q8NH92 325 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 SORBS1Q9BX66 1292 aaKnown RBP10.56□□□□□ -0.72
MSH6-201ENST00000234420 CLEC4EQ9ULY5 219 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 SEC14L6B5MCN3 397 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 DNAJB5O75953 348 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 CER1O95813 267 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 GSRP00390 522 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 LPLP06858 475 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 IMPDH1P20839 514 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 PRPS1L1P21108 318 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 TRAM1Q15629 374 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 CORO6Q6QEF8 472 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 BBS10Q8TAM1 723 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 GPN2Q9H9Y4 310 aaPredicted RBP10.56□□□□□ -0.72
MSH6-201ENST00000234420 ACKR4Q9NPB9 350 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 MEIS3P1A6NDR6 274 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 HAX1O00165 279 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 ARPC1BO15143 372 aaKnown RBP10.55□□□□□ -0.72
MSH6-201ENST00000234420 COQ9O75208 318 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 DEFA4P12838 97 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 CA5AP35218 305 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 MPPED2Q15777 294 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 TMEM31Q5JXX7 168 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 OR56A3Q8NH54 315 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 Q9N2J8 555 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 OBP2BQ9NPH6 170 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 ACSL6Q9UKU0 697 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 ZC3H13Q5T200 1668 aaKnown RBP10.55□□□□□ -0.72
MSH6-201ENST00000234420 SOCS2O14508 198 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 RASAL1O95294 804 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 PBX2P40425 430 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 HK3P52790 923 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 SQSTM1Q13501 440 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 CYBRD1Q53TN4 286 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 TMEM130Q8N3G9 435 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 TSPEARQ8WU66 669 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 GON7Q9BXV9 100 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 CD48P09326 243 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 HNF1AP20823 631 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 SPATS1Q496A3 300 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 RNF175Q8N4F7 328 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 PLD5Q8N7P1 536 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 WDR20Q8TBZ3 569 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 DAZAP1Q96EP5 407 aaKnown RBP10.55□□□□□ -0.72
MSH6-201ENST00000234420 UGT2A1Q9Y4X1 527 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 NUBP2Q9Y5Y2 271 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 CACNG2Q9Y698 323 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 ZNF891A8MT65 544 aaPredicted RBP10.55□□□□□ -0.72
MSH6-201ENST00000234420 BMP4P12644 408 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 NPBWR1P48145 328 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 TAP2Q03519 686 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 DUOXA1Q1HG43 343 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 IGSF11Q5DX21 431 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 CLEC9AQ6UXN8 241 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 RNF111Q6ZNA4 994 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 DBX2Q6ZNG2 339 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 ZNF546Q86UE3 836 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 CILP2Q8IUL8 1156 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 SPARTQ8N0X7 666 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 DPH3Q96FX2 82 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 SLC6A5Q9Y345 797 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 LRRC7Q96NW7 1537 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 MAN2B1O00754 1011 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 PDGFAP04085 211 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 GALTP07902 379 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 H2BFMP0C1H6 154 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 PYCR1P32322 319 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 CLDN2P57739 230 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 PLCXD2Q0VAA5 305 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 CNIH2Q6PI25 160 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 CREB3L2Q70SY1 520 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 ZNF559Q9BR84 538 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 OCEL1Q9H607 264 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 ZNF442Q9H7R0 627 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 KCMF1Q9P0J7 381 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 LMO7Q8WWI1 1683 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 RNF225M0QZC1 329 aaPredicted RBP10.55□□□□□ -0.72
MSH6-201ENST00000234420 TP53I11O14683 189 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 PRKYO43930 277 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 AGFG1P52594 562 aaKnown RBP10.55□□□□□ -0.72
MSH6-201ENST00000234420 KIAA0141Q14154 515 aaPredicted RBP10.55□□□□□ -0.72
MSH6-201ENST00000234420 HNF4GQ14541 408 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 DPY19L1Q2PZI1 675 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 UNC93AQ86WB7 457 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 TCTE3Q8IZS6 198 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 AKR7LQ8NHP1 331 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms