RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 NDUFAF6Q330K2 333 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 ABHD13Q7L211 337 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 PRSS48Q7RTY5 328 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 NANOGNBQ7Z5D8 188 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 OAFQ86UD1 273 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 NRROSQ86YC3 692 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 OR8J1Q8NGP2 316 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 PIK3R3Q92569 461 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 COQ8BQ96D53 544 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 LOC105369274A0A096LPK9 316 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 LOC102723532A0A0G2JNH3 316 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 FUOMA2VDF0 154 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 FAM172BPA6NC97 362 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 ELOA3DA6NLF2 546 aaPredicted RBP11.33□□□□□ -0.6
CHPF2-201ENST00000035307 RNASET2O00584 256 aaKnown RBP11.33□□□□□ -0.6
CHPF2-201ENST00000035307 SPINT1O43278 529 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 OR2B3O76000 313 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 EFEMP2O95967 443 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 CHMP24386 653 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 ACVR2AP27037 513 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 BMP8BP34820 402 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 OR12D2P58182 307 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 APOFQ13790 326 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 ENPP2Q13822 863 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 ELOA3BQ3SY89 546 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 ARHGAP40Q5TG30 622 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 BMP8AQ7Z5Y6 402 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 RASGRP3Q8IV61 690 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 OR4N4Q8N0Y3 316 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 ELOA3Q8NG57 546 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 C9orf43Q8TAL5 461 aaPredicted RBP11.33□□□□□ -0.6
CHPF2-201ENST00000035307 NEIL3Q8TAT5 605 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 TBC1D15Q8TC07 691 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 TSEN15Q8WW01 171 aaKnown RBP11.33□□□□□ -0.6
CHPF2-201ENST00000035307 GGHQ92820 318 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 OMA1Q96E52 524 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 JSRP1Q96MG2 331 aaPredicted RBP11.33□□□□□ -0.6
CHPF2-201ENST00000035307 CENPOQ9BU64 300 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 OR52A5Q9H2C5 316 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 TRPV5Q9NQA5 729 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 ENPP5Q9UJA9 477 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 GNG8Q9UK08 70 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 POU2F3Q9UKI9 436 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.33□□□□□ -0.6
CHPF2-201ENST00000035307 MED31Q9Y3C7 131 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 SLCO1B1Q9Y6L6 691 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 TCRBV5S2A0A599 114 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 PLD2O14939 933 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 HYAL3O43820 417 aaPredicted RBP11.33□□□□□ -0.6
CHPF2-201ENST00000035307 RCVRNP35243 200 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 AHRP35869 848 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 BCL6P41182 706 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 HNRNPKP61978 463 aaKnown RBP eCLIP11.33□□□□□ -0.69e-8■■■■■ 29.6
CHPF2-201ENST00000035307 CRYZQ08257 329 aaKnown RBP11.33□□□□□ -0.6
CHPF2-201ENST00000035307 VEZF1Q14119 521 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 TAF13Q15543 124 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 PODNL1Q6PEZ8 512 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 ADAMTSL4Q6UY14 1074 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 TMEM64Q6YI46 380 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 CPOQ8IVL8 374 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 PRR22Q8IZ63 422 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 EID2Q8N6I1 236 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 OR2L3Q8NG85 312 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 OR4K13Q8NH42 304 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 BMFQ96LC9 184 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 ERMAPQ96PL5 475 aaPredicted RBP11.33□□□□□ -0.6
CHPF2-201ENST00000035307 NTN4Q9HB63 628 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 NDUFAF4Q9P032 175 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 NCDNQ9UBB6 729 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 PCDHGA10Q9Y5H3 936 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 MDC1Q14676 2089 aaKnown RBP11.33□□□□□ -0.6
CHPF2-201ENST00000035307 NYNRINQ9P2P1 1898 aaKnown RBP11.33□□□□□ -0.6
CHPF2-201ENST00000035307 H0YGG7 62 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 PLPP1O14494 284 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 BCAT2O15382 392 aaPredicted RBP11.33□□□□□ -0.6
CHPF2-201ENST00000035307 EMC8O43402 210 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 RAD1O60671 282 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 FURINP09958 794 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 GRK6P43250 576 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 ARF3P61204 181 aaPredicted RBP11.33□□□□□ -0.6
CHPF2-201ENST00000035307 ADARB1P78563 741 aaKnown RBP11.33□□□□□ -0.6
CHPF2-201ENST00000035307 LGALS3BPQ08380 585 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 WDR45BQ5MNZ6 344 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 LCN1P1Q5VSP4 162 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 LINGO2Q7L985 606 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 MSRB3Q8IXL7 192 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 CDS1Q92903 461 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 TUBA1CQ9BQE3 449 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 MED20Q9H944 212 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 SRA1Q9HD15 236 aaKnown RBP11.33□□□□□ -0.6
CHPF2-201ENST00000035307 ATG4BQ9Y4P1 393 aa11.33□□□□□ -0.6
CHPF2-201ENST00000035307 OR6C70A6NIJ9 312 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 EIF3FO00303 357 aaPredicted RBP11.32□□□□□ -0.6
CHPF2-201ENST00000035307 ZNF217O75362 1048 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 GGT2P36268 569 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 EIF2DP41214 584 aaKnown RBP11.32□□□□□ -0.6
CHPF2-201ENST00000035307 ALDH3B2P48448 385 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 GFERP55789 205 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 FOXL2P58012 376 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 OR1D5P58170 312 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms