RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 MCM8Q9UJA3 840 aa17.16■□□□□ 0.34
SMN1-211ENST00000625245 ZNF225Q9UK10 706 aa17.16■□□□□ 0.34
SMN1-211ENST00000625245 MRPS18CQ9Y3D5 142 aaKnown RBP17.16■□□□□ 0.34
SMN1-211ENST00000625245 HEATR5AQ86XA9 2040 aa17.16■□□□□ 0.34
SMN1-211ENST00000625245 DSCAMO60469 2012 aa17.15■□□□□ 0.34
SMN1-211ENST00000625245 GNG14A0A1W2PPG7 69 aa17.15■□□□□ 0.34
SMN1-211ENST00000625245 SLC22A20A6NK97 555 aa17.15■□□□□ 0.34
SMN1-211ENST00000625245 C17orf51A8MQB3 221 aa17.15■□□□□ 0.34
SMN1-211ENST00000625245 TRIM49D1C9J1S8 452 aa17.15■□□□□ 0.34
SMN1-211ENST00000625245 HCRTR2O43614 444 aa17.15■□□□□ 0.34
SMN1-211ENST00000625245 SCO2O43819 266 aa17.15■□□□□ 0.34
SMN1-211ENST00000625245 KRT6AP02538 564 aa17.15■□□□□ 0.34
SMN1-211ENST00000625245 KRT6BP04259 564 aa17.15■□□□□ 0.34
SMN1-211ENST00000625245 PEPDP12955 493 aa17.15■□□□□ 0.34
SMN1-211ENST00000625245 CHN1P15882 459 aa17.15■□□□□ 0.34
SMN1-211ENST00000625245 HSD17B3P37058 310 aa17.15■□□□□ 0.34
SMN1-211ENST00000625245 KRT6CP48668 564 aa17.15■□□□□ 0.34
SMN1-211ENST00000625245 PNLIPRP2P54317 469 aa17.15■□□□□ 0.34
SMN1-211ENST00000625245 SIRPAP78324 504 aa17.15■□□□□ 0.34
SMN1-211ENST00000625245 CLCQ05315 142 aa17.15■□□□□ 0.34
SMN1-211ENST00000625245 Q5PR19 223 aa17.15■□□□□ 0.34
SMN1-211ENST00000625245 OR2A2Q6IF42 318 aa17.15■□□□□ 0.34
SMN1-211ENST00000625245 C17orf53Q8N3J3 647 aaPredicted RBP17.15■□□□□ 0.34
SMN1-211ENST00000625245 OR4N2Q8NGD1 307 aa17.15■□□□□ 0.34
SMN1-211ENST00000625245 STARD4Q96DR4 205 aa17.15■□□□□ 0.34
SMN1-211ENST00000625245 MTBPQ96DY7 904 aa17.15■□□□□ 0.34
SMN1-211ENST00000625245 PIK3IP1Q96FE7 263 aa17.15■□□□□ 0.34
SMN1-211ENST00000625245 PGM2Q96G03 612 aa17.15■□□□□ 0.34
SMN1-211ENST00000625245 VSTM2LQ96N03 204 aa17.15■□□□□ 0.34
SMN1-211ENST00000625245 MED18Q9BUE0 208 aa17.15■□□□□ 0.34
SMN1-211ENST00000625245 CDC42EP4Q9H3Q1 356 aaKnown RBP17.15■□□□□ 0.34
SMN1-211ENST00000625245 DSN1Q9H410 356 aa17.15■□□□□ 0.34
SMN1-211ENST00000625245 UBTD1Q9HAC8 227 aa17.15■□□□□ 0.34
SMN1-211ENST00000625245 ZNF226Q9NYT6 803 aa17.15■□□□□ 0.34
SMN1-211ENST00000625245 SENP1Q9P0U3 644 aa17.15■□□□□ 0.34
SMN1-211ENST00000625245 PPP4R1LQ9P1A2 415 aa17.15■□□□□ 0.34
SMN1-211ENST00000625245 OR10H1Q9Y4A9 318 aa17.15■□□□□ 0.34
SMN1-211ENST00000625245 CTIFO43310 598 aaKnown RBP17.14■□□□□ 0.33
SMN1-211ENST00000625245 PCDH7O60245 1069 aa17.14■□□□□ 0.33
SMN1-211ENST00000625245 SUPT7LO94864 414 aa17.14■□□□□ 0.33
SMN1-211ENST00000625245 CRHP06850 196 aa17.14■□□□□ 0.33
SMN1-211ENST00000625245 CD79BP40259 229 aa17.14■□□□□ 0.33
SMN1-211ENST00000625245 DSCR4P56555 118 aaPredicted RBP17.14■□□□□ 0.33
SMN1-211ENST00000625245 B3GALT5-AS1P59052 145 aa17.14■□□□□ 0.33
SMN1-211ENST00000625245 ETF1P62495 437 aaKnown RBP17.14■□□□□ 0.33
SMN1-211ENST00000625245 MRPS22P82650 360 aaKnown RBP17.14■□□□□ 0.33
SMN1-211ENST00000625245 BCL2A1Q16548 175 aa17.14■□□□□ 0.33
SMN1-211ENST00000625245 SH2D4BQ5SQS7 431 aa17.14■□□□□ 0.33
SMN1-211ENST00000625245 BTLAQ7Z6A9 289 aa17.14■□□□□ 0.33
SMN1-211ENST00000625245 MEIOBQ8N635 442 aa17.14■□□□□ 0.33
SMN1-211ENST00000625245 GBP7Q8N8V2 638 aaPredicted RBP17.14■□□□□ 0.33
SMN1-211ENST00000625245 UHMK1Q8TAS1 419 aaKnown RBP17.14■□□□□ 0.33
SMN1-211ENST00000625245 PIGTQ969N2 578 aa17.14■□□□□ 0.33
SMN1-211ENST00000625245 ERP27Q96DN0 273 aa17.14■□□□□ 0.33
SMN1-211ENST00000625245 C1QTNF3Q9BXJ4 246 aa17.14■□□□□ 0.33
SMN1-211ENST00000625245 OPN3Q9H1Y3 402 aaPredicted RBP17.14■□□□□ 0.33
SMN1-211ENST00000625245 DEFB108AA8MXU0 73 aa17.13■□□□□ 0.33
SMN1-211ENST00000625245 B4DXG7 233 aa17.13■□□□□ 0.33
SMN1-211ENST00000625245 SIAH2O43255 324 aa17.13■□□□□ 0.33
SMN1-211ENST00000625245 SEC14L5O43304 696 aa17.13■□□□□ 0.33
SMN1-211ENST00000625245 ULK1O75385 1050 aa17.13■□□□□ 0.33
SMN1-211ENST00000625245 LY6G6DO95868 133 aa17.13■□□□□ 0.33
SMN1-211ENST00000625245 HEXAP06865 529 aa17.13■□□□□ 0.33
SMN1-211ENST00000625245 SBK3P0C264 359 aa17.13■□□□□ 0.33
SMN1-211ENST00000625245 HSD3B1P14060 373 aa17.13■□□□□ 0.33
SMN1-211ENST00000625245 HK1P19367 917 aa17.13■□□□□ 0.33
SMN1-211ENST00000625245 HSD3B2P26439 372 aa17.13■□□□□ 0.33
SMN1-211ENST00000625245 HMOX2P30519 316 aa17.13■□□□□ 0.33
SMN1-211ENST00000625245 MC3RP41968 323 aa17.13■□□□□ 0.33
SMN1-211ENST00000625245 KCNJ5P48544 419 aa17.13■□□□□ 0.33
SMN1-211ENST00000625245 GAS1P54826 345 aa17.13■□□□□ 0.33
SMN1-211ENST00000625245 RAE1P78406 368 aaKnown RBP17.13■□□□□ 0.33
SMN1-211ENST00000625245 BTKQ06187 659 aa17.13■□□□□ 0.33
SMN1-211ENST00000625245 ZNF155Q12901 538 aaPredicted RBP17.13■□□□□ 0.33
SMN1-211ENST00000625245 CSTF3Q12996 717 aaKnown RBP17.13■□□□□ 0.33
SMN1-211ENST00000625245 STX5Q13190 355 aa17.13■□□□□ 0.33
SMN1-211ENST00000625245 RASA2Q15283 850 aa17.13■□□□□ 0.33
SMN1-211ENST00000625245 RAET1LQ5VY80 246 aa17.13■□□□□ 0.33
SMN1-211ENST00000625245 ZNF474Q6S9Z5 364 aaPredicted RBP17.13■□□□□ 0.33
SMN1-211ENST00000625245 ZNF572Q7Z3I7 529 aaPredicted RBP17.13■□□□□ 0.33
SMN1-211ENST00000625245 SAMD14Q8IZD0 417 aaPredicted RBP17.13■□□□□ 0.33
SMN1-211ENST00000625245 FAM9CQ8IZT9 166 aa17.13■□□□□ 0.33
SMN1-211ENST00000625245 OR7G2Q8NG99 324 aa17.13■□□□□ 0.33
SMN1-211ENST00000625245 METTL6Q8TCB7 284 aa17.13■□□□□ 0.33
SMN1-211ENST00000625245 C16orf78Q8WTQ4 265 aa17.13■□□□□ 0.33
SMN1-211ENST00000625245 FIG4Q92562 907 aa17.13■□□□□ 0.33
SMN1-211ENST00000625245 ZC3HAV1LQ96H79 300 aaKnown RBP17.13■□□□□ 0.33
SMN1-211ENST00000625245 BBS4Q96RK4 519 aa17.13■□□□□ 0.33
SMN1-211ENST00000625245 EBPLQ9BY08 206 aa17.13■□□□□ 0.33
SMN1-211ENST00000625245 FUT8Q9BYC5 575 aa17.13■□□□□ 0.33
SMN1-211ENST00000625245 SLC35C2Q9NQQ7 365 aa17.13■□□□□ 0.33
SMN1-211ENST00000625245 TAS2R9Q9NYW1 312 aa17.13■□□□□ 0.33
SMN1-211ENST00000625245 MED11Q9P086 117 aa17.13■□□□□ 0.33
SMN1-211ENST00000625245 FAM171A2A8MVW0 826 aa17.12■□□□□ 0.33
SMN1-211ENST00000625245 H7C1Q1 480 aa17.12■□□□□ 0.33
SMN1-211ENST00000625245 SMAD7O15105 426 aaKnown RBP17.12■□□□□ 0.33
SMN1-211ENST00000625245 CTAGE8P0CG41 777 aa17.12■□□□□ 0.33
SMN1-211ENST00000625245 POU2F1P14859 743 aa17.12■□□□□ 0.33
SMN1-211ENST00000625245 TAC1P20366 129 aa17.12■□□□□ 0.33
SMN1-211ENST00000625245 EVI2BP34910 448 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms