RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 SLC35A3Q9Y2D2 325 aa5.31□□□□□ -1.56
SYNCRIP-204ENST00000616122 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.31□□□□□ -1.56
SYNCRIP-204ENST00000616122 A0A1W2PRQ8 180 aa5.31□□□□□ -1.56
SYNCRIP-204ENST00000616122 TRAPPC13A5PLN9 417 aa5.31□□□□□ -1.56
SYNCRIP-204ENST00000616122 METTL15A6NJ78 407 aa5.31□□□□□ -1.56
SYNCRIP-204ENST00000616122 A8MU76 341 aa5.31□□□□□ -1.56
SYNCRIP-204ENST00000616122 GPR89AB7ZAQ6 455 aa5.31□□□□□ -1.56
SYNCRIP-204ENST00000616122 LILRB3O75022 631 aa5.31□□□□□ -1.56
SYNCRIP-204ENST00000616122 IGFBP1P08833 259 aaPredicted RBP5.31□□□□□ -1.56
SYNCRIP-204ENST00000616122 GPR89BP0CG08 455 aa5.31□□□□□ -1.56
SYNCRIP-204ENST00000616122 IL7P13232 177 aa5.31□□□□□ -1.56
SYNCRIP-204ENST00000616122 F3P13726 295 aa5.31□□□□□ -1.56
SYNCRIP-204ENST00000616122 AHRP35869 848 aa5.31□□□□□ -1.56
SYNCRIP-204ENST00000616122 NKX2-5P52952 324 aaPredicted RBP5.31□□□□□ -1.56
SYNCRIP-204ENST00000616122 TMEM240Q5SV17 173 aa5.31□□□□□ -1.56
SYNCRIP-204ENST00000616122 C18orf63Q68DL7 685 aa5.31□□□□□ -1.56
SYNCRIP-204ENST00000616122 KLBQ86Z14 1044 aa5.31□□□□□ -1.56
SYNCRIP-204ENST00000616122 PHC2Q8IXK0 858 aa5.31□□□□□ -1.56
SYNCRIP-204ENST00000616122 MS4A15Q8N5U1 240 aa5.31□□□□□ -1.56
SYNCRIP-204ENST00000616122 SAMD12Q8N8I0 201 aa5.31□□□□□ -1.56
SYNCRIP-204ENST00000616122 OR9A2Q8NGT5 310 aa5.31□□□□□ -1.56
SYNCRIP-204ENST00000616122 NR4A3Q92570 626 aa5.31□□□□□ -1.56
SYNCRIP-204ENST00000616122 NDC1Q9BTX1 674 aa5.31□□□□□ -1.56
SYNCRIP-204ENST00000616122 TMED9Q9BVK6 235 aa5.31□□□□□ -1.56
SYNCRIP-204ENST00000616122 LGR4Q9BXB1 951 aa5.31□□□□□ -1.56
SYNCRIP-204ENST00000616122 RMI1Q9H9A7 625 aa5.31□□□□□ -1.56
SYNCRIP-204ENST00000616122 MKKSQ9NPJ1 570 aaPredicted RBP5.31□□□□□ -1.56
SYNCRIP-204ENST00000616122 SIDT1Q9NXL6 827 aaKnown RBP5.31□□□□□ -1.56
SYNCRIP-204ENST00000616122 HSPB11Q9Y547 144 aa5.31□□□□□ -1.56
SYNCRIP-204ENST00000616122 PIAS3Q9Y6X2 628 aa5.31□□□□□ -1.56
SYNCRIP-204ENST00000616122 SONP18583 2426 aaKnown RBP5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 TRIM64A6NGJ6 449 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 H3BQ06 376 aaPredicted RBP5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 SYT5O00445 386 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 PRKRAO75569 313 aaKnown RBP5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 CDC123O75794 336 aaPredicted RBP5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 UBXN7O94888 489 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 AIFM1O95831 613 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 APEX1P27695 318 aaKnown RBP5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 HMGA2P52926 109 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 IDNKQ5T6J7 187 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 PPP2R2DQ66LE6 453 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 CCDC80Q76M96 950 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 BCDIN3DQ7Z5W3 292 aaKnown RBP5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 C12orf40Q86WS4 652 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 ETFBKMTQ8IXQ9 262 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 IZUMO1Q8IYV9 350 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 ATP6V1C2Q8NEY4 427 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 C1orf216Q8TAB5 229 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 GRHL3Q8TE85 626 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 FKBP10Q96AY3 582 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 SPACA7Q96KW9 195 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 ZFYVE21Q9BQ24 234 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 TIMM29Q9BSF4 260 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 SLIRPQ9GZT3 109 aaKnown RBP5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 SLITRK2Q9H156 845 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 DDX31Q9H8H2 851 aaKnown RBP5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 CLEC2DQ9UHP7 191 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 TMEM5Q9Y2B1 443 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 C2orf92A0A1B0GVN3 265 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 HIST1H2ABP04908 130 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 RNH1P13489 461 aaKnown RBP5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 FBXW4P57775 412 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 TRA2BP62995 288 aaKnown RBP5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 RHAGQ02094 409 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 DMPKQ09013 629 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 RAB40BQ12829 278 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 TMEM31Q5JXX7 168 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 SLC16A12Q6ZSM3 486 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 HIST3H2AQ7L7L0 130 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 RBM12BQ8IXT5 1001 aaKnown RBP5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 UXS1Q8NBZ7 420 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 OR2L3Q8NG85 312 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 TANKQ92844 425 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 HIST1H2ACQ93077 130 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 RELTQ969Z4 430 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 ELP4Q96EB1 424 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 LRRC3BQ96PB8 259 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 SLC38A3Q99624 504 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 APOOQ9BUR5 198 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 GSDMCQ9BYG8 508 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 RNF167Q9H6Y7 350 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 MOV10Q9HCE1 1003 aaKnown RBP5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 MBNL1Q9NR56 388 aaKnown RBP5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 FBXO8Q9NRD0 319 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 LYARQ9NX58 379 aaKnown RBP5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 SPHK1Q9NYA1 384 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 SATB2Q9UPW6 733 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 EXOSC1Q9Y3B2 195 aaKnown RBP5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 DOCK1Q14185 1865 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 A0A1W2PR48 441 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 UPK1BO75841 260 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 KLF8O95600 359 aaPredicted RBP5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 C1QCP02747 245 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 PSKH1P11801 424 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 ELAVL4P26378 380 aaKnown RBP5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 GABRA3P34903 492 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 SHC2P98077 582 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 BNC1Q01954 994 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 SLC3A1Q07837 685 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms