RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 C3orf14Q9HBI5 128 aa17.89■□□□□ 0.46
MMP28-204ENST00000615136 BCL2L10Q9HD36 194 aa17.89■□□□□ 0.46
MMP28-204ENST00000615136 PCDH15Q96QU1 1955 aa17.89■□□□□ 0.45
MMP28-204ENST00000615136 TMEM131Q92545 1883 aa17.89■□□□□ 0.45
MMP28-204ENST00000615136 THADAQ6YHU6 1953 aa17.89■□□□□ 0.45
MMP28-204ENST00000615136 SERPINB7O75635 380 aa17.89■□□□□ 0.45
MMP28-204ENST00000615136 RPLP0P05388 317 aaKnown RBP17.89■□□□□ 0.45
MMP28-204ENST00000615136 FOSL2P15408 326 aa17.89■□□□□ 0.45
MMP28-204ENST00000615136 PPP2R1BP30154 601 aa17.89■□□□□ 0.45
MMP28-204ENST00000615136 SLC15A1P46059 708 aa17.89■□□□□ 0.45
MMP28-204ENST00000615136 ILKQ13418 452 aa17.89■□□□□ 0.45
MMP28-204ENST00000615136 ELOCQ15369 112 aa17.89■□□□□ 0.45
MMP28-204ENST00000615136 DCST1Q5T197 706 aa17.89■□□□□ 0.45
MMP28-204ENST00000615136 ARMC6Q6NXE6 501 aa17.89■□□□□ 0.45
MMP28-204ENST00000615136 PTCHD4Q6ZW05 846 aa17.89■□□□□ 0.45
MMP28-204ENST00000615136 USP43Q70EL4 1123 aa17.89■□□□□ 0.45
MMP28-204ENST00000615136 CA13Q8N1Q1 262 aa17.89■□□□□ 0.45
MMP28-204ENST00000615136 ARHGEF39Q8N4T4 335 aa17.89■□□□□ 0.45
MMP28-204ENST00000615136 C19orf47Q8N9M1 422 aaKnown RBP17.89■□□□□ 0.45
MMP28-204ENST00000615136 MAP3K3Q99759 626 aa17.89■□□□□ 0.45
MMP28-204ENST00000615136 SLC38A1Q9H2H9 487 aa17.89■□□□□ 0.45
MMP28-204ENST00000615136 DSN1Q9H410 356 aa17.89■□□□□ 0.45
MMP28-204ENST00000615136 TBC1D17Q9HA65 648 aa17.89■□□□□ 0.45
MMP28-204ENST00000615136 CLN6Q9NWW5 311 aa17.89■□□□□ 0.45
MMP28-204ENST00000615136 UCKL1Q9NWZ5 548 aa17.89■□□□□ 0.45
MMP28-204ENST00000615136 PCDHGA3Q9Y5H0 932 aa17.89■□□□□ 0.45
MMP28-204ENST00000615136 FCMRO60667 390 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 CPMP14384 443 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 CSNK1EP49674 416 aaKnown RBP17.88■□□□□ 0.45
MMP28-204ENST00000615136 BCAP31P51572 246 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 CHRNEQ04844 493 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 DMWDQ09019 674 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 PIN1Q13526 163 aaPredicted RBP17.88■□□□□ 0.45
MMP28-204ENST00000615136 SLX4IPQ5VYV7 408 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 USP53Q70EK8 1073 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 RBM12BQ8IXT5 1001 aaKnown RBP17.88■□□□□ 0.45
MMP28-204ENST00000615136 CADM4Q8NFZ8 388 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 OR9A4Q8NGU2 314 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 BBS10Q8TAM1 723 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 FAM174AQ8TBP5 190 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 GUCD1Q96NT3 240 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 CCDC3Q9BQI4 270 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 LYRM4Q9HD34 91 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 A3GALT2U3KPV4 340 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 METTL15A6NJ78 407 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 STK25O00506 426 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 RDH16O75452 317 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 SLITRK5O94991 958 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 DCNP07585 359 aaKnown RBP17.88■□□□□ 0.45
MMP28-204ENST00000615136 GRK5P34947 590 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 FASLGP48023 281 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 UGT2B15P54855 530 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 SMIM11AP58511 58 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 SNRPGP62308 76 aaKnown RBP17.88■□□□□ 0.45
MMP28-204ENST00000615136 ARMCX4Q5H9R4 360 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 TMEM201Q5SNT2 666 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 MFSD12Q6NUT3 480 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 PGBD2Q6P3X8 592 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 SPEM1Q8N4L4 309 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 OR6T1Q8NGN1 323 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 MCFD2Q8NI22 146 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 PRR14Q9BWN1 585 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 SLC25A19Q9HC21 320 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 DAPK2Q9UIK4 370 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 A4GNTQ9UNA3 340 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 DOLKQ9UPQ8 538 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 CHST2Q9Y4C5 530 aa17.88■□□□□ 0.45
MMP28-204ENST00000615136 ADRA2AP08913 450 aa17.87■□□□□ 0.45
MMP28-204ENST00000615136 TLX1P31314 330 aaPredicted RBP17.87■□□□□ 0.45
MMP28-204ENST00000615136 RGS6P49758 472 aa17.87■□□□□ 0.45
MMP28-204ENST00000615136 PDX1P52945 283 aa17.87■□□□□ 0.45
MMP28-204ENST00000615136 LSM11P83369 360 aaKnown RBP eCLIP17.87■□□□□ 0.45
MMP28-204ENST00000615136 IFITM3Q01628 133 aa17.87■□□□□ 0.45
MMP28-204ENST00000615136 TRIM16LQ309B1 348 aa17.87■□□□□ 0.45
MMP28-204ENST00000615136 ZNF404Q494X3 552 aa17.87■□□□□ 0.45
MMP28-204ENST00000615136 C12orf73Q69YU5 71 aa17.87■□□□□ 0.45
MMP28-204ENST00000615136 KRT73Q86Y46 540 aa17.87■□□□□ 0.45
MMP28-204ENST00000615136 OR2L13Q8N349 312 aa17.87■□□□□ 0.45
MMP28-204ENST00000615136 MINDY2Q8NBR6 621 aa17.87■□□□□ 0.45
MMP28-204ENST00000615136 ACTRT3Q9BYD9 372 aa17.87■□□□□ 0.45
MMP28-204ENST00000615136 MMP27Q9H306 513 aa17.87■□□□□ 0.45
MMP28-204ENST00000615136 CTPS2Q9NRF8 586 aa17.87■□□□□ 0.45
MMP28-204ENST00000615136 GPR55Q9Y2T6 319 aaPredicted RBP17.87■□□□□ 0.45
MMP28-204ENST00000615136 FRS3O43559 492 aa17.86■□□□□ 0.45
MMP28-204ENST00000615136 OR10H3O60404 316 aa17.86■□□□□ 0.45
MMP28-204ENST00000615136 TPST2O60704 377 aa17.86■□□□□ 0.45
MMP28-204ENST00000615136 CNOT3O75175 753 aaKnown RBP17.86■□□□□ 0.45
MMP28-204ENST00000615136 PORP16435 677 aaPredicted RBP17.86■□□□□ 0.45
MMP28-204ENST00000615136 ZNF10P21506 573 aaPredicted RBP17.86■□□□□ 0.45
MMP28-204ENST00000615136 POU1F1P28069 291 aa17.86■□□□□ 0.45
MMP28-204ENST00000615136 CAPZBP47756 277 aa17.86■□□□□ 0.45
MMP28-204ENST00000615136 GFERP55789 205 aa17.86■□□□□ 0.45
MMP28-204ENST00000615136 NXPH1P58417 271 aa17.86■□□□□ 0.45
MMP28-204ENST00000615136 ZNF628Q5EBL2 1059 aa17.86■□□□□ 0.45
MMP28-204ENST00000615136 PLAG1Q6DJT9 500 aa17.86■□□□□ 0.45
MMP28-204ENST00000615136 GKN2Q86XP6 184 aa17.86■□□□□ 0.45
MMP28-204ENST00000615136 VRK2Q86Y07 508 aa17.86■□□□□ 0.45
MMP28-204ENST00000615136 MCATQ8IVS2 390 aaKnown RBP17.86■□□□□ 0.45
MMP28-204ENST00000615136 ZNF655Q8N720 491 aaPredicted RBP17.86■□□□□ 0.45
MMP28-204ENST00000615136 KBTBD8Q8NFY9 601 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms