RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 AKAP8O43823 692 aaKnown RBP19.18■□□□□ 0.66
SSBP3-216ENST00000610401 SHC1P29353 583 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 SLC7A9P82251 487 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 KRT33BQ14525 404 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 PLBD1Q6P4A8 553 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 NXPE3Q969Y0 559 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 PPIL3Q9H2H8 161 aaKnown RBP19.18■□□□□ 0.66
SSBP3-216ENST00000610401 ACOXLQ9NUZ1 547 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 NUDT15Q9NV35 164 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 NPIPA5A0A0B4J1W7 369 aa19.17■□□□□ 0.66
SSBP3-216ENST00000610401 OR52A4PA6NMU1 304 aa19.17■□□□□ 0.66
SSBP3-216ENST00000610401 NPIPA7E9PJI5 369 aa19.17■□□□□ 0.66
SSBP3-216ENST00000610401 FCER2P06734 321 aa19.17■□□□□ 0.66
SSBP3-216ENST00000610401 NPIPA8P0DM63 369 aa19.17■□□□□ 0.66
SSBP3-216ENST00000610401 FCN2Q15485 313 aa19.17■□□□□ 0.66
SSBP3-216ENST00000610401 MZT2BQ6NZ67 158 aa19.17■□□□□ 0.66
SSBP3-216ENST00000610401 CYB561A3Q8NBI2 242 aa19.17■□□□□ 0.66
SSBP3-216ENST00000610401 OR10H4Q8NGA5 316 aa19.17■□□□□ 0.66
SSBP3-216ENST00000610401 OR13C5Q8NGS8 318 aa19.17■□□□□ 0.66
SSBP3-216ENST00000610401 TMEM255BQ8WV15 326 aa19.17■□□□□ 0.66
SSBP3-216ENST00000610401 GCDHQ92947 438 aaPredicted RBP19.17■□□□□ 0.66
SSBP3-216ENST00000610401 RAD51AP1Q96B01 352 aa19.17■□□□□ 0.66
SSBP3-216ENST00000610401 POLDIP3Q9BY77 421 aaKnown RBP19.17■□□□□ 0.66
SSBP3-216ENST00000610401 TESQ9UGI8 421 aaKnown RBP19.17■□□□□ 0.66
SSBP3-216ENST00000610401 KCNK6Q9Y257 313 aa19.17■□□□□ 0.66
SSBP3-216ENST00000610401 HEATR5BQ9P2D3 2071 aa19.17■□□□□ 0.66
SSBP3-216ENST00000610401 MC3RP41968 323 aa19.17■□□□□ 0.66
SSBP3-216ENST00000610401 NR2C2APQ86WQ0 139 aa19.17■□□□□ 0.66
SSBP3-216ENST00000610401 FAM26EQ8N5C1 309 aa19.17■□□□□ 0.66
SSBP3-216ENST00000610401 AP3S1Q92572 193 aa19.17■□□□□ 0.66
SSBP3-216ENST00000610401 ORAI1Q96D31 301 aa19.17■□□□□ 0.66
SSBP3-216ENST00000610401 ATF6BQ99941 703 aa19.17■□□□□ 0.66
SSBP3-216ENST00000610401 AIF1LQ9BQI0 150 aa19.17■□□□□ 0.66
SSBP3-216ENST00000610401 ABCG5Q9H222 651 aa19.17■□□□□ 0.66
SSBP3-216ENST00000610401 RBFOX1Q9NWB1 397 aaKnown RBP19.17■□□□□ 0.66
SSBP3-216ENST00000610401 TCF20Q9UGU0 1960 aaKnown RBP19.17■□□□□ 0.66
SSBP3-216ENST00000610401 CD3GP09693 182 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 ACP2P11117 423 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 ACP5P13686 325 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 KLHL22Q53GT1 634 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 ZNF628Q5EBL2 1059 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 SLC36A4Q6YBV0 504 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 ZNF793Q6ZN11 406 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 GDPGP1Q6ZNW5 385 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 OR51L1Q8NGJ5 315 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 HMGB4Q8WW32 186 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 OMA1Q96E52 524 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 MSLNLQ96KJ4 702 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 SAMD8Q96LT4 415 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 FERD3LQ96RJ6 166 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 ZSCAN32Q9NX65 697 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 PLEKHM1Q9Y4G2 1056 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 ATG4BQ9Y4P1 393 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 SIRT4Q9Y6E7 314 aaPredicted RBP19.16■□□□□ 0.66
SSBP3-216ENST00000610401 CHD9Q3L8U1 2897 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 NDUFS4O43181 175 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 PRODHO43272 600 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 CRYZL1O95825 349 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 VIPR2P41587 438 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 RPS5P46782 204 aaKnown RBP19.16■□□□□ 0.66
SSBP3-216ENST00000610401 TOR1AIP1Q5JTV8 583 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 SLC38A6Q8IZM9 456 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 BMPERQ8N8U9 685 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 OR4Q3Q8NH05 313 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 DTD2Q96FN9 168 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 MRGPRX3Q96LB0 322 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 SLC38A2Q96QD8 506 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 CCDC86Q9H6F5 360 aaKnown RBP19.16■□□□□ 0.66
SSBP3-216ENST00000610401 CIB4A0PJX0 185 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 GNB5O14775 395 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 SERPINI2O75830 405 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 GKN3PP0CG01 181 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 DRD5P21918 477 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 GZMKP49863 264 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 HCCSP53701 268 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 P2RX3P56373 397 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 C6orf132Q5T0Z8 1188 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 ZNF614Q8N883 585 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 OR9A2Q8NGT5 310 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 TMEM163Q8TC26 289 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 MAP6Q96JE9 813 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 SLA2Q9H6Q3 261 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 A4GALTQ9NPC4 353 aa19.16■□□□□ 0.66
SSBP3-216ENST00000610401 PCDH8O95206 1070 aa19.15■□□□□ 0.66
SSBP3-216ENST00000610401 TJAP1Q5JTD0 557 aa19.15■□□□□ 0.66
SSBP3-216ENST00000610401 AMZ2Q86W34 360 aa19.15■□□□□ 0.66
SSBP3-216ENST00000610401 SIRT6Q8N6T7 355 aa19.15■□□□□ 0.66
SSBP3-216ENST00000610401 CLDN22Q8N7P3 220 aa19.15■□□□□ 0.66
SSBP3-216ENST00000610401 AMDHD1Q96NU7 426 aa19.15■□□□□ 0.66
SSBP3-216ENST00000610401 WDFY2Q96P53 400 aa19.15■□□□□ 0.66
SSBP3-216ENST00000610401 MS4A8Q9BY19 250 aa19.15■□□□□ 0.66
SSBP3-216ENST00000610401 ENKD1Q9H0I2 346 aa19.15■□□□□ 0.66
SSBP3-216ENST00000610401 SF3B6Q9Y3B4 125 aaKnown RBP19.15■□□□□ 0.66
SSBP3-216ENST00000610401 BTN3A3O00478 584 aa19.15■□□□□ 0.66
SSBP3-216ENST00000610401 FGF18O76093 207 aa19.15■□□□□ 0.66
SSBP3-216ENST00000610401 CLUP10909 449 aa19.15■□□□□ 0.66
SSBP3-216ENST00000610401 IFNA8P32881 189 aa19.15■□□□□ 0.66
SSBP3-216ENST00000610401 OR3A3P47888 321 aa19.15■□□□□ 0.66
SSBP3-216ENST00000610401 OCLNQ16625 522 aa19.15■□□□□ 0.66
SSBP3-216ENST00000610401 QSOX2Q6ZRP7 698 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms