RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 CCDC115Q96NT0 180 aa18.53■□□□□ 0.56
DDX39A-207ENST00000588542 ZBTB18Q99592 522 aa18.53■□□□□ 0.56
DDX39A-207ENST00000588542 YIPF4Q9BSR8 244 aa18.53■□□□□ 0.56
DDX39A-207ENST00000588542 ANGPTL4Q9BY76 406 aa18.53■□□□□ 0.56
DDX39A-207ENST00000588542 TTTY12Q9BZ98 90 aa18.53■□□□□ 0.56
DDX39A-207ENST00000588542 Q9N2J8 555 aa18.53■□□□□ 0.56
DDX39A-207ENST00000588542 GPATCH2Q9NW75 528 aa18.53■□□□□ 0.56
DDX39A-207ENST00000588542 DCTN4Q9UJW0 460 aa18.53■□□□□ 0.56
DDX39A-207ENST00000588542 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.53■□□□□ 0.56
DDX39A-207ENST00000588542 HIVEP3Q5T1R4 2406 aa18.53■□□□□ 0.56
DDX39A-207ENST00000588542 DNAJC13O75165 2243 aa18.52■□□□□ 0.56
DDX39A-207ENST00000588542 ANKUB1A6NFN9 424 aa18.52■□□□□ 0.56
DDX39A-207ENST00000588542 NPIPA5E9PKD4 350 aa18.52■□□□□ 0.56
DDX39A-207ENST00000588542 HS6ST1O60243 411 aa18.52■□□□□ 0.56
DDX39A-207ENST00000588542 ABCB7O75027 752 aa18.52■□□□□ 0.56
DDX39A-207ENST00000588542 TRIM3O75382 744 aaPredicted RBP18.52■□□□□ 0.56
DDX39A-207ENST00000588542 CPSF4O95639 269 aaKnown RBP18.52■□□□□ 0.56
DDX39A-207ENST00000588542 PTGDSP41222 190 aa18.52■□□□□ 0.56
DDX39A-207ENST00000588542 KCNJ2P63252 427 aa18.52■□□□□ 0.56
DDX39A-207ENST00000588542 RPP38P78345 283 aaKnown RBP18.52■□□□□ 0.56
DDX39A-207ENST00000588542 TP53BP2Q13625 1128 aa18.52■□□□□ 0.56
DDX39A-207ENST00000588542 LASP1Q14847 261 aaKnown RBP18.52■□□□□ 0.56
DDX39A-207ENST00000588542 DUSP5Q16690 384 aa18.52■□□□□ 0.56
DDX39A-207ENST00000588542 HYAL4Q2M3T9 481 aa18.52■□□□□ 0.56
DDX39A-207ENST00000588542 SPDYE7PQ495Y7 208 aa18.52■□□□□ 0.56
DDX39A-207ENST00000588542 TBCELQ5QJ74 424 aa18.52■□□□□ 0.56
DDX39A-207ENST00000588542 CGB2Q6NT52 195 aa18.52■□□□□ 0.56
DDX39A-207ENST00000588542 CLEC4FQ8N1N0 589 aa18.52■□□□□ 0.56
DDX39A-207ENST00000588542 VPS37AQ8NEZ2 397 aa18.52■□□□□ 0.56
DDX39A-207ENST00000588542 RNF138Q8WVD3 245 aa18.52■□□□□ 0.56
DDX39A-207ENST00000588542 SLC9A6Q92581 669 aa18.52■□□□□ 0.56
DDX39A-207ENST00000588542 OTUB1Q96FW1 271 aaPredicted RBP18.52■□□□□ 0.56
DDX39A-207ENST00000588542 GPR137Q96N19 417 aa18.52■□□□□ 0.56
DDX39A-207ENST00000588542 RILPQ96NA2 401 aa18.52■□□□□ 0.56
DDX39A-207ENST00000588542 IL1RL2Q9HB29 575 aa18.52■□□□□ 0.56
DDX39A-207ENST00000588542 FGFR1OP2Q9NVK5 253 aa18.52■□□□□ 0.56
DDX39A-207ENST00000588542 BTNL2Q9UIR0 455 aa18.52■□□□□ 0.56
DDX39A-207ENST00000588542 NPIPA1Q9UND3 350 aa18.52■□□□□ 0.56
DDX39A-207ENST00000588542 PCNX3Q9H6A9 2034 aa18.51■□□□□ 0.55
DDX39A-207ENST00000588542 LRRC3CA6NJW4 275 aa18.51■□□□□ 0.55
DDX39A-207ENST00000588542 FAM166BA8MTA8 275 aa18.51■□□□□ 0.55
DDX39A-207ENST00000588542 IL33O95760 270 aa18.51■□□□□ 0.55
DDX39A-207ENST00000588542 IGKV1D-16P01601 117 aa18.51■□□□□ 0.55
DDX39A-207ENST00000588542 CYP4B1P13584 511 aa18.51■□□□□ 0.55
DDX39A-207ENST00000588542 IL12BP29460 328 aa18.51■□□□□ 0.55
DDX39A-207ENST00000588542 SOAT1P35610 550 aa18.51■□□□□ 0.55
DDX39A-207ENST00000588542 KRT20P35900 424 aa18.51■□□□□ 0.55
DDX39A-207ENST00000588542 MAN2A2P49641 1150 aa18.51■□□□□ 0.55
DDX39A-207ENST00000588542 PRIM2P49643 509 aa18.51■□□□□ 0.55
DDX39A-207ENST00000588542 PPIAP62937 165 aaKnown RBP18.51■□□□□ 0.55
DDX39A-207ENST00000588542 MRPS22P82650 360 aaKnown RBP18.51■□□□□ 0.55
DDX39A-207ENST00000588542 PLGLB1Q02325 96 aa18.51■□□□□ 0.55
DDX39A-207ENST00000588542 EFR3AQ14156 821 aa18.51■□□□□ 0.55
DDX39A-207ENST00000588542 VPS26BQ4G0F5 336 aa18.51■□□□□ 0.55
DDX39A-207ENST00000588542 CMPK2Q5EBM0 449 aa18.51■□□□□ 0.55
DDX39A-207ENST00000588542 FNDC7Q5VTL7 733 aa18.51■□□□□ 0.55
DDX39A-207ENST00000588542 CDC73Q6P1J9 531 aa18.51■□□□□ 0.55
DDX39A-207ENST00000588542 OR52N2Q8NGI0 321 aa18.51■□□□□ 0.55
DDX39A-207ENST00000588542 GOT1L1Q8NHS2 421 aaPredicted RBP18.51■□□□□ 0.55
DDX39A-207ENST00000588542 GPR151Q8TDV0 419 aa18.51■□□□□ 0.55
DDX39A-207ENST00000588542 OR52E6Q96RD3 313 aa18.51■□□□□ 0.55
DDX39A-207ENST00000588542 SIKE1Q9BRV8 207 aa18.51■□□□□ 0.55
DDX39A-207ENST00000588542 DOHHQ9BU89 302 aa18.51■□□□□ 0.55
DDX39A-207ENST00000588542 ACTRT3Q9BYD9 372 aa18.51■□□□□ 0.55
DDX39A-207ENST00000588542 SEC14L3Q9UDX4 400 aa18.51■□□□□ 0.55
DDX39A-207ENST00000588542 PCDHGB4Q9UN71 923 aa18.51■□□□□ 0.55
DDX39A-207ENST00000588542 TFECO14948 347 aaPredicted RBP18.5■□□□□ 0.55
DDX39A-207ENST00000588542 ASNA1O43681 348 aa18.5■□□□□ 0.55
DDX39A-207ENST00000588542 ICOSLGO75144 302 aa18.5■□□□□ 0.55
DDX39A-207ENST00000588542 UNC5CO95185 931 aa18.5■□□□□ 0.55
DDX39A-207ENST00000588542 IL6P05231 212 aa18.5■□□□□ 0.55
DDX39A-207ENST00000588542 RFPL3SP0C7P2 107 aa18.5■□□□□ 0.55
DDX39A-207ENST00000588542 POLR2JP52435 117 aaKnown RBP18.5■□□□□ 0.55
DDX39A-207ENST00000588542 KCNK10P57789 538 aa18.5■□□□□ 0.55
DDX39A-207ENST00000588542 DECR1Q16698 335 aa18.5■□□□□ 0.55
DDX39A-207ENST00000588542 EIF2S3LQ2VIR3 472 aaKnown RBP18.5■□□□□ 0.55
DDX39A-207ENST00000588542 KRTCAP3Q53RY4 240 aa18.5■□□□□ 0.55
DDX39A-207ENST00000588542 BNC2Q6ZN30 1099 aaPredicted RBP18.5■□□□□ 0.55
DDX39A-207ENST00000588542 C6orf120Q7Z4R8 191 aa18.5■□□□□ 0.55
DDX39A-207ENST00000588542 FUNDC1Q8IVP5 155 aa18.5■□□□□ 0.55
DDX39A-207ENST00000588542 TMEM251Q8N6I4 163 aa18.5■□□□□ 0.55
DDX39A-207ENST00000588542 FAM110BQ8TC76 370 aa18.5■□□□□ 0.55
DDX39A-207ENST00000588542 TMCO6Q96DC7 493 aa18.5■□□□□ 0.55
DDX39A-207ENST00000588542 RMND5BQ96G75 393 aaPredicted RBP18.5■□□□□ 0.55
DDX39A-207ENST00000588542 INPP5KQ9BT40 448 aa18.5■□□□□ 0.55
DDX39A-207ENST00000588542 SERHL2Q9H4I8 314 aa18.5■□□□□ 0.55
DDX39A-207ENST00000588542 METTL7AQ9H8H3 244 aa18.5■□□□□ 0.55
DDX39A-207ENST00000588542 ZDHHC11Q9H8X9 412 aa18.5■□□□□ 0.55
DDX39A-207ENST00000588542 ZFP64Q9NPA5 681 aa18.5■□□□□ 0.55
DDX39A-207ENST00000588542 SERHLQ9NQF3 203 aa18.5■□□□□ 0.55
DDX39A-207ENST00000588542 GIN1Q9NXP7 522 aa18.5■□□□□ 0.55
DDX39A-207ENST00000588542 FLRT3Q9NZU0 649 aa18.5■□□□□ 0.55
DDX39A-207ENST00000588542 A0A0G2JND7 137 aa18.49■□□□□ 0.55
DDX39A-207ENST00000588542 RNF103-CHMP3A0A140T963 221 aa18.49■□□□□ 0.55
DDX39A-207ENST00000588542 FAM234BA2RU67 622 aa18.49■□□□□ 0.55
DDX39A-207ENST00000588542 PRAMEF25A6NGN4 478 aa18.49■□□□□ 0.55
DDX39A-207ENST00000588542 ADAM10O14672 748 aa18.49■□□□□ 0.55
DDX39A-207ENST00000588542 SNX4O95219 450 aa18.49■□□□□ 0.55
DDX39A-207ENST00000588542 C1QCP02747 245 aa18.49■□□□□ 0.55
DDX39A-207ENST00000588542 VIMP08670 466 aaKnown RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms