RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-210	ENST00000578733	CYB561	P49447	251 aa		10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	POLE2	P56282	527 aa		10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	ARG2	P78540	354 aa		10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	PSG6	Q00889	435 aa		10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	OC90	Q02509	493 aa	Predicted RBP	10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	MFAP5	Q13361	173 aa		10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	CAPRIN1	Q14444	709 aa	Known RBP	10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	TBR1	Q16650	682 aa		10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	CYP51A1	Q16850	503 aa		10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	GTDC1	Q4AE62	458 aa		10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	CT45A2	Q5DJT8	189 aa		10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	PIGG	Q5H8A4	983 aa		10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	LINC00696	Q6ZRV3	163 aa		10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	METTL25	Q8N6Q8	603 aa		10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	ZNF441	Q8N8Z8	693 aa		10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	SIMC1	Q8NDZ2	872 aa		10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	FDCSP	Q8NFU4	85 aa		10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	TNIP2	Q8NFZ5	429 aa		10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	FBXO30	Q8TB52	745 aa		10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	PSMF1	Q92530	271 aa		10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	WBP1	Q96G27	269 aa		10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	C16orf58	Q96GQ5	468 aa		10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	RASL10B	Q96S79	203 aa		10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	YIPF4	Q9BSR8	244 aa		10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	TRIM4	Q9C037	500 aa		10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	RNF32	Q9H0A6	362 aa		10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	NXF5	Q9H1B4	397 aa	Known RBP	10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	ADNP	Q9H2P0	1102 aa		10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	TRIM45	Q9H8W5	580 aa	Predicted RBP	10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	HHATL	Q9HCP6	504 aa		10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	HPF1	Q9NWY4	346 aa		10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	SLC25A37	Q9NYZ2	338 aa		10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	ERVK-11	Q9UQG0	969 aa		10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	DTX4	Q9Y2E6	619 aa		10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	ZNF451	Q9Y4E5	1061 aa		10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	NPFFR2	Q9Y5X5	522 aa		10.42	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733		B2RBV5	119 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	ERVH48-1	M5A8F1	160 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	DNAJA2	O60884	412 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	REM1	O75628	298 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	PPM1B	O75688	479 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	UBOX5	O94941	541 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	T-ENOL	P0DO92	83 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	ACP2	P11117	423 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	HOXB9	P17482	250 aa	Predicted RBP	10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	ABCD3	P28288	659 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	PIGA	P37287	484 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	CLK3	P49761	638 aa	Known RBP	10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	HLCS	P50747	726 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	PNLIPRP2	P54317	469 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	CORO7	P57737	925 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	PSME3	P61289	254 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	RPS26	P62854	115 aa	Known RBP	10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	RAPSN	Q13702	412 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	RGN	Q15493	299 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	NNAT	Q16517	81 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	DUSP5	Q16690	384 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	DNAL1	Q4LDG9	190 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	GPAT3	Q53EU6	434 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	GCNT6	Q5T4J0	391 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	FCRLB	Q6BAA4	426 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	NANOGP8	Q6NSW7	305 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	ERICH5	Q6P6B1	374 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	CCDC121	Q6ZUS5	278 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	SERPINA11	Q86U17	422 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	SLC30A8	Q8IWU4	369 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	MSRB3	Q8IXL7	192 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	PGAM4	Q8N0Y7	254 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	BEST3	Q8N1M1	668 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	ZADH2	Q8N4Q0	377 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	SLC16A11	Q8NCK7	471 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	OR5D16	Q8NGK9	328 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	XAGE5	Q8WWM1	108 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	HOXB13	Q92826	284 aa	Predicted RBP	10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	CDS1	Q92903	461 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	EXTL1	Q92935	676 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	TMEM125	Q96AQ2	219 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	TMCO6	Q96DC7	493 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	OMA1	Q96E52	524 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	RMND5B	Q96G75	393 aa	Predicted RBP	10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	AURKB	Q96GD4	344 aa	Predicted RBP	10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	SGCZ	Q96LD1	299 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	COL21A1	Q96P44	957 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	SMAD5	Q99717	465 aa	Known RBP	10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	CPPED1	Q9BRF8	314 aa	Predicted RBP	10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	HOXD1	Q9GZZ0	328 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	C1orf21	Q9H246	121 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	ZNF552	Q9H707	407 aa	Predicted RBP	10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	NANOG	Q9H9S0	305 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	SPAG4	Q9NPE6	437 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	POLE3	Q9NRF9	147 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	SLC6A13	Q9NSD5	602 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	TUBD1	Q9UJT1	453 aa		10.41	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	OR6C70	A6NIJ9	312 aa		10.4	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	HMGN4	O00479	90 aa		10.4	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	GMNN	O75496	209 aa		10.4	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	UNC5C	O95185	931 aa		10.4	□□□□□ -0.74
CDK5RAP3-210	ENST00000578733	IL33	O95760	270 aa		10.4	□□□□□ -0.74

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