RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	FEN1	P39748	380 aa	Known RBP	13.26	□□□□□ -0.29
ABR-223	ENST00000573895	SOX3	P41225	446 aa		13.26	□□□□□ -0.29
ABR-223	ENST00000573895	NCBP2	P52298	156 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
ABR-223	ENST00000573895	SLC37A1	P57057	533 aa		13.26	□□□□□ -0.29
ABR-223	ENST00000573895	SPATS1	Q496A3	300 aa		13.26	□□□□□ -0.29
ABR-223	ENST00000573895	C8orf82	Q6P1X6	216 aa	Predicted RBP	13.26	□□□□□ -0.29
ABR-223	ENST00000573895	ZNF621	Q6ZSS3	439 aa		13.26	□□□□□ -0.29
ABR-223	ENST00000573895	MDGA2	Q7Z553	956 aa		13.26	□□□□□ -0.29
ABR-223	ENST00000573895	DHDDS	Q86SQ9	333 aa		13.26	□□□□□ -0.29
ABR-223	ENST00000573895	ANKRD46	Q86W74	232 aa		13.26	□□□□□ -0.29
ABR-223	ENST00000573895	SULF2	Q8IWU5	870 aa		13.26	□□□□□ -0.29
ABR-223	ENST00000573895	C9orf40	Q8IXQ3	194 aa		13.26	□□□□□ -0.29
ABR-223	ENST00000573895	CCDC116	Q8IYX3	515 aa		13.26	□□□□□ -0.29
ABR-223	ENST00000573895	PGAM4	Q8N0Y7	254 aa		13.26	□□□□□ -0.29
ABR-223	ENST00000573895	ARHGAP24	Q8N264	748 aa		13.26	□□□□□ -0.29
ABR-223	ENST00000573895	RBM15B	Q8NDT2	890 aa	Known RBP	13.26	□□□□□ -0.29
ABR-223	ENST00000573895	PSD4	Q8NDX1	1056 aa		13.26	□□□□□ -0.29
ABR-223	ENST00000573895	OR4A15	Q8NGL6	344 aa		13.26	□□□□□ -0.29
ABR-223	ENST00000573895	CGREF1	Q99674	301 aa		13.26	□□□□□ -0.29
ABR-223	ENST00000573895	GPATCH1	Q9BRR8	931 aa	Known RBP	13.26	□□□□□ -0.29
ABR-223	ENST00000573895	INPP5K	Q9BT40	448 aa		13.26	□□□□□ -0.29
ABR-223	ENST00000573895	PAIP1	Q9H074	479 aa	Known RBP	13.26	□□□□□ -0.29
ABR-223	ENST00000573895	LRMDA	Q9H2I8	198 aa		13.26	□□□□□ -0.29
ABR-223	ENST00000573895	MMADHC	Q9H3L0	296 aa	Predicted RBP	13.26	□□□□□ -0.29
ABR-223	ENST00000573895	GLIPR2	Q9H4G4	154 aa		13.26	□□□□□ -0.29
ABR-223	ENST00000573895	CXorf21	Q9HAI6	301 aa		13.26	□□□□□ -0.29
ABR-223	ENST00000573895	C3orf14	Q9HBI5	128 aa		13.26	□□□□□ -0.29
ABR-223	ENST00000573895	GMEB1	Q9Y692	573 aa		13.26	□□□□□ -0.29
ABR-223	ENST00000573895	NBPF19	A0A087WUL8	3843 aa		13.26	□□□□□ -0.29
ABR-223	ENST00000573895	ZNF407	Q9C0G0	2248 aa		13.25	□□□□□ -0.29
ABR-223	ENST00000573895	ASNA1	O43681	348 aa		13.25	□□□□□ -0.29
ABR-223	ENST00000573895	PEX1	O43933	1283 aa		13.25	□□□□□ -0.29
ABR-223	ENST00000573895	OR6B1	O95007	311 aa		13.25	□□□□□ -0.29
ABR-223	ENST00000573895	C6orf47	O95873	294 aa		13.25	□□□□□ -0.29
ABR-223	ENST00000573895	UQCRC2	P22695	453 aa		13.25	□□□□□ -0.29
ABR-223	ENST00000573895	MAGEA8	P43361	318 aa		13.25	□□□□□ -0.29
ABR-223	ENST00000573895	MEOX1	P50221	254 aa		13.25	□□□□□ -0.29
ABR-223	ENST00000573895	PSME3	P61289	254 aa		13.25	□□□□□ -0.29
ABR-223	ENST00000573895	NCALD	P61601	193 aa		13.25	□□□□□ -0.29
ABR-223	ENST00000573895	HBA1	P69905	142 aa		13.25	□□□□□ -0.29
ABR-223	ENST00000573895	FUT7	Q11130	342 aa		13.25	□□□□□ -0.29
ABR-223	ENST00000573895	ZNF267	Q14586	743 aa	Predicted RBP	13.25	□□□□□ -0.29
ABR-223	ENST00000573895	RUNDC3A	Q59EK9	446 aa		13.25	□□□□□ -0.29
ABR-223	ENST00000573895	BHLHB9	Q6PI77	547 aa		13.25	□□□□□ -0.29
ABR-223	ENST00000573895	IL20RB	Q6UXL0	311 aa		13.25	□□□□□ -0.29
ABR-223	ENST00000573895	RNF111	Q6ZNA4	994 aa		13.25	□□□□□ -0.29
ABR-223	ENST00000573895	C16orf47	Q6ZP98	133 aa	Predicted RBP	13.25	□□□□□ -0.29
ABR-223	ENST00000573895	RTL4	Q6ZR62	310 aa		13.25	□□□□□ -0.29
ABR-223	ENST00000573895	ASRGL1	Q7L266	308 aa		13.25	□□□□□ -0.29
ABR-223	ENST00000573895	SLC29A4	Q7RTT9	530 aa		13.25	□□□□□ -0.29
ABR-223	ENST00000573895	GALNT12	Q8IXK2	581 aa		13.25	□□□□□ -0.29
ABR-223	ENST00000573895	CLECL1	Q8IZS7	167 aa		13.25	□□□□□ -0.29
ABR-223	ENST00000573895	OR8J3	Q8NGG0	315 aa		13.25	□□□□□ -0.29
ABR-223	ENST00000573895	SLC22A8	Q8TCC7	542 aa		13.25	□□□□□ -0.29
ABR-223	ENST00000573895	MOAP1	Q96BY2	351 aa		13.25	□□□□□ -0.29
ABR-223	ENST00000573895	CNPPD1	Q9BV87	410 aa		13.25	□□□□□ -0.29
ABR-223	ENST00000573895	LIN28A	Q9H9Z2	209 aa	Known RBP	13.25	□□□□□ -0.29
ABR-223	ENST00000573895	PRPF19	Q9UMS4	504 aa	Known RBP	13.25	□□□□□ -0.29
ABR-223	ENST00000573895	ERVK-19	Q9WJR5	959 aa		13.25	□□□□□ -0.29
ABR-223	ENST00000573895	ZNF835	Q9Y2P0	537 aa		13.25	□□□□□ -0.29
ABR-223	ENST00000573895	PCDHB14	Q9Y5E9	798 aa		13.25	□□□□□ -0.29
ABR-223	ENST00000573895	CELSR2	Q9HCU4	2923 aa		13.24	□□□□□ -0.29
ABR-223	ENST00000573895	NIN	Q8N4C6	2090 aa		13.24	□□□□□ -0.29
ABR-223	ENST00000573895	EVPLL	A8MZ36	301 aa		13.24	□□□□□ -0.29
ABR-223	ENST00000573895	HRK	O00198	91 aa		13.24	□□□□□ -0.29
ABR-223	ENST00000573895	PLOD2	O00469	737 aa		13.24	□□□□□ -0.29
ABR-223	ENST00000573895	DNAJC8	O75937	253 aa	Predicted RBP	13.24	□□□□□ -0.29
ABR-223	ENST00000573895	KRT75	O95678	551 aa		13.24	□□□□□ -0.29
ABR-223	ENST00000573895	RNF224	P0DH78	156 aa		13.24	□□□□□ -0.29
ABR-223	ENST00000573895	PTPN6	P29350	595 aa		13.24	□□□□□ -0.29
ABR-223	ENST00000573895	GPC1	P35052	558 aa		13.24	□□□□□ -0.29
ABR-223	ENST00000573895	SLC25A3	Q00325	362 aa		13.24	□□□□□ -0.29
ABR-223	ENST00000573895	MAP4K2	Q12851	820 aa		13.24	□□□□□ -0.29
ABR-223	ENST00000573895	EBP	Q15125	230 aa	Known RBP	13.24	□□□□□ -0.29
ABR-223	ENST00000573895	RNFT1	Q5M7Z0	435 aa		13.24	□□□□□ -0.29
ABR-223	ENST00000573895	NANOGP8	Q6NSW7	305 aa		13.24	□□□□□ -0.29
ABR-223	ENST00000573895	MTFR2	Q6P444	385 aa		13.24	□□□□□ -0.29
ABR-223	ENST00000573895	TMEM64	Q6YI46	380 aa		13.24	□□□□□ -0.29
ABR-223	ENST00000573895		Q6ZPB1	254 aa	Predicted RBP	13.24	□□□□□ -0.29
ABR-223	ENST00000573895	ZNF551	Q7Z340	670 aa	Predicted RBP	13.24	□□□□□ -0.29
ABR-223	ENST00000573895	DEFB107A	Q8IZN7	70 aa		13.24	□□□□□ -0.29
ABR-223	ENST00000573895	GHDC	Q8N2G8	530 aa		13.24	□□□□□ -0.29
ABR-223	ENST00000573895	C17orf47	Q8NEP4	570 aa		13.24	□□□□□ -0.29
ABR-223	ENST00000573895	OR7G1	Q8NGA0	311 aa		13.24	□□□□□ -0.29
ABR-223	ENST00000573895	FBXO27	Q8NI29	283 aa		13.24	□□□□□ -0.29
ABR-223	ENST00000573895	ZNF675	Q8TD23	568 aa		13.24	□□□□□ -0.29
ABR-223	ENST00000573895	TP53INP1	Q96A56	240 aa		13.24	□□□□□ -0.29
ABR-223	ENST00000573895	ANKRD27	Q96NW4	1050 aa		13.24	□□□□□ -0.29
ABR-223	ENST00000573895	WWTR1	Q9GZV5	400 aa		13.24	□□□□□ -0.29
ABR-223	ENST00000573895	RAD21L1	Q9H4I0	556 aa		13.24	□□□□□ -0.29
ABR-223	ENST00000573895	NANOG	Q9H9S0	305 aa		13.24	□□□□□ -0.29
ABR-223	ENST00000573895	IL1RL2	Q9HB29	575 aa		13.24	□□□□□ -0.29
ABR-223	ENST00000573895	SPAG4	Q9NPE6	437 aa		13.24	□□□□□ -0.29
ABR-223	ENST00000573895	SLAMF8	Q9P0V8	285 aa		13.24	□□□□□ -0.29
ABR-223	ENST00000573895	PLEKHB1	Q9UF11	243 aa	Predicted RBP	13.24	□□□□□ -0.29
ABR-223	ENST00000573895	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	13.24	□□□□□ -0.29
ABR-223	ENST00000573895	CORO2B	Q9UQ03	480 aa		13.24	□□□□□ -0.29
ABR-223	ENST00000573895	NUP214	P35658	2090 aa	Predicted RBP	13.24	□□□□□ -0.29
ABR-223	ENST00000573895	EXPH5	Q8NEV8	1989 aa		13.23	□□□□□ -0.29
ABR-223	ENST00000573895		A0A087WV62	115 aa		13.23	□□□□□ -0.29

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