RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 IGFL3Q6UXB1 125 aa21.66■■□□□ 1.06
RAB40C-212ENST00000569575 NUP54Q7Z3B4 507 aa21.66■■□□□ 1.06
RAB40C-212ENST00000569575 CLEC4FQ8N1N0 589 aa21.66■■□□□ 1.06
RAB40C-212ENST00000569575 TMEM156Q8N614 296 aa21.66■■□□□ 1.06
RAB40C-212ENST00000569575 SIRT6Q8N6T7 355 aa21.66■■□□□ 1.06
RAB40C-212ENST00000569575 FDCSPQ8NFU4 85 aa21.66■■□□□ 1.06
RAB40C-212ENST00000569575 TNIP2Q8NFZ5 429 aa21.66■■□□□ 1.06
RAB40C-212ENST00000569575 XAGE5Q8WWM1 108 aa21.66■■□□□ 1.06
RAB40C-212ENST00000569575 ASB15Q8WXK1 588 aa21.66■■□□□ 1.06
RAB40C-212ENST00000569575 TTC9Q92623 222 aa21.66■■□□□ 1.06
RAB40C-212ENST00000569575 HAS2Q92819 552 aa21.66■■□□□ 1.06
RAB40C-212ENST00000569575 SLC35A4Q96G79 324 aa21.66■■□□□ 1.06
RAB40C-212ENST00000569575 HOXD1Q9GZZ0 328 aa21.66■■□□□ 1.06
RAB40C-212ENST00000569575 A4GALTQ9NPC4 353 aa21.66■■□□□ 1.06
RAB40C-212ENST00000569575 P2RX2Q9UBL9 471 aa21.66■■□□□ 1.06
RAB40C-212ENST00000569575 FREM2Q5SZK8 3169 aa21.66■■□□□ 1.06
RAB40C-212ENST00000569575 TP53I11O14683 189 aa21.65■■□□□ 1.06
RAB40C-212ENST00000569575 TNFRSF21O75509 655 aa21.65■■□□□ 1.06
RAB40C-212ENST00000569575 PPM1BO75688 479 aa21.65■■□□□ 1.06
RAB40C-212ENST00000569575 NADKO95544 446 aaPredicted RBP21.65■■□□□ 1.06
RAB40C-212ENST00000569575 IL33O95760 270 aa21.65■■□□□ 1.06
RAB40C-212ENST00000569575 FBXO45P0C2W1 286 aa21.65■■□□□ 1.06
RAB40C-212ENST00000569575 OR12D1P0DN82 309 aa21.65■■□□□ 1.06
RAB40C-212ENST00000569575 SFTPCP11686 197 aa21.65■■□□□ 1.06
RAB40C-212ENST00000569575 CYB561P49447 251 aa21.65■■□□□ 1.06
RAB40C-212ENST00000569575 EEFSECP57772 596 aaKnown RBP21.65■■□□□ 1.06
RAB40C-212ENST00000569575 PLCXD2Q0VAA5 305 aa21.65■■□□□ 1.06
RAB40C-212ENST00000569575 CAPRIN1Q14444 709 aaKnown RBP21.65■■□□□ 1.06
RAB40C-212ENST00000569575 ZNF630Q2M218 657 aaPredicted RBP21.65■■□□□ 1.06
RAB40C-212ENST00000569575 DNAL1Q4LDG9 190 aa21.65■■□□□ 1.06
RAB40C-212ENST00000569575 NPSR1Q6W5P4 371 aa21.65■■□□□ 1.06
RAB40C-212ENST00000569575 CCDC121Q6ZUS5 278 aa21.65■■□□□ 1.06
RAB40C-212ENST00000569575 C16orf62Q7Z3J2 963 aa21.65■■□□□ 1.06
RAB40C-212ENST00000569575 NET1Q7Z628 596 aaPredicted RBP21.65■■□□□ 1.06
RAB40C-212ENST00000569575 SLC15A3Q8IY34 581 aa21.65■■□□□ 1.06
RAB40C-212ENST00000569575 GOLM1Q8NBJ4 401 aa21.65■■□□□ 1.06
RAB40C-212ENST00000569575 THAP3Q8WTV1 239 aaPredicted RBP21.65■■□□□ 1.06
RAB40C-212ENST00000569575 DIO2Q92813 273 aa21.65■■□□□ 1.06
RAB40C-212ENST00000569575 SPACA9Q96E40 222 aaPredicted RBP21.65■■□□□ 1.06
RAB40C-212ENST00000569575 SERHL2Q9H4I8 314 aa21.65■■□□□ 1.06
RAB40C-212ENST00000569575 A8MVJ9 347 aa21.64■■□□□ 1.05
RAB40C-212ENST00000569575 HS6ST1O60243 411 aa21.64■■□□□ 1.05
RAB40C-212ENST00000569575 STX11O75558 287 aa21.64■■□□□ 1.05
RAB40C-212ENST00000569575 CPA2P48052 419 aa21.64■■□□□ 1.05
RAB40C-212ENST00000569575 NTRK2Q16620 822 aa21.64■■□□□ 1.05
RAB40C-212ENST00000569575 GCNT6Q5T4J0 391 aa21.64■■□□□ 1.05
RAB40C-212ENST00000569575 TNFAIP8L2Q6P589 184 aaPredicted RBP21.64■■□□□ 1.05
RAB40C-212ENST00000569575 TMEM81Q6P7N7 255 aa21.64■■□□□ 1.05
RAB40C-212ENST00000569575 PNPT1Q8TCS8 783 aaKnown RBP21.64■■□□□ 1.05
RAB40C-212ENST00000569575 CDS1Q92903 461 aa21.64■■□□□ 1.05
RAB40C-212ENST00000569575 TMEM125Q96AQ2 219 aa21.64■■□□□ 1.05
RAB40C-212ENST00000569575 UTP23Q9BRU9 249 aaKnown RBP21.64■■□□□ 1.05
RAB40C-212ENST00000569575 YIPF4Q9BSR8 244 aa21.64■■□□□ 1.05
RAB40C-212ENST00000569575 TMEM181Q9P2C4 612 aa21.64■■□□□ 1.05
RAB40C-212ENST00000569575 PRPF19Q9UMS4 504 aaKnown RBP21.64■■□□□ 1.05
RAB40C-212ENST00000569575 CPAMD8Q8IZJ3 1885 aa21.64■■□□□ 1.05
RAB40C-212ENST00000569575 A6NL46 340 aa21.63■■□□□ 1.05
RAB40C-212ENST00000569575 MASP2O00187 686 aa21.63■■□□□ 1.05
RAB40C-212ENST00000569575 KCNK2O95069 426 aa21.63■■□□□ 1.05
RAB40C-212ENST00000569575 TFPTP0C1Z6 253 aa21.63■■□□□ 1.05
RAB40C-212ENST00000569575 ATP6V1C1P21283 382 aa21.63■■□□□ 1.05
RAB40C-212ENST00000569575 IL12BP29460 328 aa21.63■■□□□ 1.05
RAB40C-212ENST00000569575 CPOXP36551 454 aa21.63■■□□□ 1.05
RAB40C-212ENST00000569575 CRISP3P54108 245 aa21.63■■□□□ 1.05
RAB40C-212ENST00000569575 POLE2P56282 527 aa21.63■■□□□ 1.05
RAB40C-212ENST00000569575 MTPNP58546 118 aa21.63■■□□□ 1.05
RAB40C-212ENST00000569575 RPS26P62854 115 aaKnown RBP21.63■■□□□ 1.05
RAB40C-212ENST00000569575 HPCAP84074 193 aa21.63■■□□□ 1.05
RAB40C-212ENST00000569575 VEZF1Q14119 521 aa21.63■■□□□ 1.05
RAB40C-212ENST00000569575 ZNF791Q3KP31 576 aaPredicted RBP21.63■■□□□ 1.05
RAB40C-212ENST00000569575 COX20Q5RI15 118 aa21.63■■□□□ 1.05
RAB40C-212ENST00000569575 DCST2Q5T1A1 773 aa21.63■■□□□ 1.05
RAB40C-212ENST00000569575 LRRC74BQ6ZQY2 392 aa21.63■■□□□ 1.05
RAB40C-212ENST00000569575 YTHDF3Q7Z739 585 aaKnown RBP21.63■■□□□ 1.05
RAB40C-212ENST00000569575 BCORP1Q8N888 145 aa21.63■■□□□ 1.05
RAB40C-212ENST00000569575 C11orf65Q8NCR3 313 aa21.63■■□□□ 1.05
RAB40C-212ENST00000569575 RBM15BQ8NDT2 890 aaKnown RBP21.63■■□□□ 1.05
RAB40C-212ENST00000569575 OR5D16Q8NGK9 328 aa21.63■■□□□ 1.05
RAB40C-212ENST00000569575 TMCO6Q96DC7 493 aa21.63■■□□□ 1.05
RAB40C-212ENST00000569575 OMA1Q96E52 524 aa21.63■■□□□ 1.05
RAB40C-212ENST00000569575 REXO5Q96IC2 774 aaKnown RBP21.63■■□□□ 1.05
RAB40C-212ENST00000569575 COL21A1Q96P44 957 aa21.63■■□□□ 1.05
RAB40C-212ENST00000569575 SDF2Q99470 211 aa21.63■■□□□ 1.05
RAB40C-212ENST00000569575 SLC39A3Q9BRY0 314 aa21.63■■□□□ 1.05
RAB40C-212ENST00000569575 SAP130Q9H0E3 1048 aa21.63■■□□□ 1.05
RAB40C-212ENST00000569575 HPF1Q9NWY4 346 aa21.63■■□□□ 1.05
RAB40C-212ENST00000569575 TAS2R1Q9NYW7 299 aa21.63■■□□□ 1.05
RAB40C-212ENST00000569575 TSPAN2O60636 221 aa21.62■■□□□ 1.05
RAB40C-212ENST00000569575 REM1O75628 298 aa21.62■■□□□ 1.05
RAB40C-212ENST00000569575 NGFRP08138 427 aa21.62■■□□□ 1.05
RAB40C-212ENST00000569575 NR2F1P10589 423 aa21.62■■□□□ 1.05
RAB40C-212ENST00000569575 ETFAP13804 333 aa21.62■■□□□ 1.05
RAB40C-212ENST00000569575 ENDOUP21128 410 aaKnown RBP21.62■■□□□ 1.05
RAB40C-212ENST00000569575 CYP51A1Q16850 503 aa21.62■■□□□ 1.05
RAB40C-212ENST00000569575 RABL3Q5HYI8 236 aa21.62■■□□□ 1.05
RAB40C-212ENST00000569575 SAMD4BQ5PRF9 694 aaKnown RBP21.62■■□□□ 1.05
RAB40C-212ENST00000569575 INTS11Q5TA45 600 aaKnown RBP21.62■■□□□ 1.05
RAB40C-212ENST00000569575 B3GNTL1Q67FW5 361 aaPredicted RBP21.62■■□□□ 1.05
RAB40C-212ENST00000569575 LYPD8Q6UX82 237 aa21.62■■□□□ 1.05
RAB40C-212ENST00000569575 RTL4Q6ZR62 310 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms