RNA–Protein interactions for RNA: ENST00000565354.5

CLN3-217, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 759 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-217ENST00000565354 SLC9A6Q92581 669 aa15.87■□□□□ 0.13
CLN3-217ENST00000565354 JADE3Q92613 823 aa15.87■□□□□ 0.13
CLN3-217ENST00000565354 MOAP1Q96BY2 351 aa15.87■□□□□ 0.13
CLN3-217ENST00000565354 OMA1Q96E52 524 aa15.87■□□□□ 0.13
CLN3-217ENST00000565354 FAM120BQ96EK7 910 aaKnown RBP15.87■□□□□ 0.13
CLN3-217ENST00000565354 TEX37Q96LM6 180 aa15.87■□□□□ 0.13
CLN3-217ENST00000565354 VSTM2LQ96N03 204 aa15.87■□□□□ 0.13
CLN3-217ENST00000565354 BTBD9Q96Q07 612 aa15.87■□□□□ 0.13
CLN3-217ENST00000565354 OR52E6Q96RD3 313 aa15.87■□□□□ 0.13
CLN3-217ENST00000565354 TMEM120AQ9BXJ8 343 aa15.87■□□□□ 0.13
CLN3-217ENST00000565354 CXorf36Q9H7Y0 433 aa15.87■□□□□ 0.13
CLN3-217ENST00000565354 SDR39U1Q9NRG7 319 aaPredicted RBP15.87■□□□□ 0.13
CLN3-217ENST00000565354 SACM1LQ9NTJ5 587 aa15.87■□□□□ 0.13
CLN3-217ENST00000565354 GPR55Q9Y2T6 319 aaPredicted RBP15.87■□□□□ 0.13
CLN3-217ENST00000565354 REM1O75628 298 aa15.86■□□□□ 0.13
CLN3-217ENST00000565354 IL6P05231 212 aa15.86■□□□□ 0.13
CLN3-217ENST00000565354 PGRP06401 933 aa15.86■□□□□ 0.13
CLN3-217ENST00000565354 ABCD3P28288 659 aa15.86■□□□□ 0.13
CLN3-217ENST00000565354 IL12AP29459 219 aa15.86■□□□□ 0.13
CLN3-217ENST00000565354 POLR2JP52435 117 aaKnown RBP15.86■□□□□ 0.13
CLN3-217ENST00000565354 WNT3P56703 355 aa15.86■□□□□ 0.13
CLN3-217ENST00000565354 CORO7P57737 925 aa15.86■□□□□ 0.13
CLN3-217ENST00000565354 HBA1P69905 142 aa15.86■□□□□ 0.13
CLN3-217ENST00000565354 IRX1P78414 480 aaPredicted RBP15.86■□□□□ 0.13
CLN3-217ENST00000565354 LRRC74AQ0VAA2 488 aa15.86■□□□□ 0.13
CLN3-217ENST00000565354 SQLEQ14534 574 aa15.86■□□□□ 0.13
CLN3-217ENST00000565354 ZNF791Q3KP31 576 aaPredicted RBP15.86■□□□□ 0.13
CLN3-217ENST00000565354 SLC22A10Q63ZE4 541 aa15.86■□□□□ 0.13
CLN3-217ENST00000565354 CDRT4Q8N9R6 151 aa15.86■□□□□ 0.13
CLN3-217ENST00000565354 OR5AK3PQ8NH89 298 aa15.86■□□□□ 0.13
CLN3-217ENST00000565354 SFXN5Q8TD22 340 aa15.86■□□□□ 0.13
CLN3-217ENST00000565354 ITLN2Q8WWU7 325 aaPredicted RBP15.86■□□□□ 0.13
CLN3-217ENST00000565354 SIRT3Q9NTG7 399 aaPredicted RBP15.86■□□□□ 0.13
CLN3-217ENST00000565354 OLAHQ9NV23 265 aa15.86■□□□□ 0.13
CLN3-217ENST00000565354 MRTO4Q9UKD2 239 aaKnown RBP15.86■□□□□ 0.13
CLN3-217ENST00000565354 FAF1Q9UNN5 650 aaPredicted RBP15.86■□□□□ 0.13
CLN3-217ENST00000565354 FAM234BA2RU67 622 aa15.85■□□□□ 0.13
CLN3-217ENST00000565354 TO15178 435 aa15.85■□□□□ 0.13
CLN3-217ENST00000565354 PEX1O43933 1283 aa15.85■□□□□ 0.13
CLN3-217ENST00000565354 PPM1BO75688 479 aa15.85■□□□□ 0.13
CLN3-217ENST00000565354 PSMG1O95456 288 aa15.85■□□□□ 0.13
CLN3-217ENST00000565354 CRYABP02511 175 aaKnown RBP15.85■□□□□ 0.13
CLN3-217ENST00000565354 KRT16P08779 473 aa15.85■□□□□ 0.13
CLN3-217ENST00000565354 ALOX5P09917 674 aa15.85■□□□□ 0.13
CLN3-217ENST00000565354 CT45A8P0DMV1 189 aa15.85■□□□□ 0.13
CLN3-217ENST00000565354 CT45A9P0DMV2 189 aa15.85■□□□□ 0.13
CLN3-217ENST00000565354 ATP4BP51164 291 aa15.85■□□□□ 0.13
CLN3-217ENST00000565354 FBXW4P57775 412 aa15.85■□□□□ 0.13
CLN3-217ENST00000565354 KCNK10P57789 538 aa15.85■□□□□ 0.13
CLN3-217ENST00000565354 GPR85P60893 370 aa15.85■□□□□ 0.13
CLN3-217ENST00000565354 PMP22Q01453 160 aa15.85■□□□□ 0.13
CLN3-217ENST00000565354 NTRK2Q16620 822 aa15.85■□□□□ 0.13
CLN3-217ENST00000565354 CT45A2Q5DJT8 189 aa15.85■□□□□ 0.13
CLN3-217ENST00000565354 ZCCHC12Q6PEW1 402 aa15.85■□□□□ 0.13
CLN3-217ENST00000565354 LYPD8Q6UX82 237 aa15.85■□□□□ 0.13
CLN3-217ENST00000565354 NPSR1Q6W5P4 371 aa15.85■□□□□ 0.13
CLN3-217ENST00000565354 WDR53Q7Z5U6 358 aaPredicted RBP15.85■□□□□ 0.13
CLN3-217ENST00000565354 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.85■□□□□ 0.13
CLN3-217ENST00000565354 ZNF227Q86WZ6 799 aa15.85■□□□□ 0.13
CLN3-217ENST00000565354 TRIML2Q8N7C3 387 aa15.85■□□□□ 0.13
CLN3-217ENST00000565354 BCORP1Q8N888 145 aa15.85■□□□□ 0.13
CLN3-217ENST00000565354 OR10G3Q8NGC4 313 aa15.85■□□□□ 0.13
CLN3-217ENST00000565354 OR9I1Q8NGQ6 314 aa15.85■□□□□ 0.13
CLN3-217ENST00000565354 FBXO30Q8TB52 745 aa15.85■□□□□ 0.13
CLN3-217ENST00000565354 GPR151Q8TDV0 419 aa15.85■□□□□ 0.13
CLN3-217ENST00000565354 DIO2Q92813 273 aa15.85■□□□□ 0.13
CLN3-217ENST00000565354 TMBIM1Q969X1 311 aa15.85■□□□□ 0.13
CLN3-217ENST00000565354 PANX1Q96RD7 426 aa15.85■□□□□ 0.13
CLN3-217ENST00000565354 YIPF4Q9BSR8 244 aa15.85■□□□□ 0.13
CLN3-217ENST00000565354 NSRP1Q9H0G5 558 aaKnown RBP15.85■□□□□ 0.13
CLN3-217ENST00000565354 RABEP2Q9H5N1 569 aa15.85■□□□□ 0.13
CLN3-217ENST00000565354 RMND5AQ9H871 391 aa15.85■□□□□ 0.13
CLN3-217ENST00000565354 RNF103-CHMP3A0A140T963 221 aa15.84■□□□□ 0.13
CLN3-217ENST00000565354 G3V3Y1 287 aa15.84■□□□□ 0.13
CLN3-217ENST00000565354 KCNH1O95259 989 aa15.84■□□□□ 0.13
CLN3-217ENST00000565354 ANP32DO95626 131 aa15.84■□□□□ 0.13
CLN3-217ENST00000565354 CCL3P10147 92 aa15.84■□□□□ 0.13
CLN3-217ENST00000565354 NAGAP17050 411 aa15.84■□□□□ 0.13
CLN3-217ENST00000565354 GABRA3P34903 492 aa15.84■□□□□ 0.13
CLN3-217ENST00000565354 RFX3P48380 749 aa15.84■□□□□ 0.13
CLN3-217ENST00000565354 MEOX1P50221 254 aa15.84■□□□□ 0.13
CLN3-217ENST00000565354 PSMD4P55036 377 aaKnown RBP15.84■□□□□ 0.13
CLN3-217ENST00000565354 PHC1P78364 1004 aa15.84■□□□□ 0.13
CLN3-217ENST00000565354 MRPS22P82650 360 aaKnown RBP15.84■□□□□ 0.13
CLN3-217ENST00000565354 PLGLB1Q02325 96 aa15.84■□□□□ 0.13
CLN3-217ENST00000565354 LASP1Q14847 261 aaKnown RBP15.84■□□□□ 0.13
CLN3-217ENST00000565354 DECR1Q16698 335 aa15.84■□□□□ 0.13
CLN3-217ENST00000565354 TIGD2Q4W5G0 525 aa15.84■□□□□ 0.13
CLN3-217ENST00000565354 MFSD12Q6NUT3 480 aa15.84■□□□□ 0.13
CLN3-217ENST00000565354 NUP54Q7Z3B4 507 aa15.84■□□□□ 0.13
CLN3-217ENST00000565354 SULF2Q8IWU5 870 aa15.84■□□□□ 0.13
CLN3-217ENST00000565354 PSMA8Q8TAA3 256 aa15.84■□□□□ 0.13
CLN3-217ENST00000565354 SLC35G5Q96KT7 338 aa15.84■□□□□ 0.13
CLN3-217ENST00000565354 LMF2Q9BU23 707 aaKnown RBP15.84■□□□□ 0.13
CLN3-217ENST00000565354 CHST11Q9NPF2 352 aa15.84■□□□□ 0.13
CLN3-217ENST00000565354 CNIH4Q9P003 139 aa15.84■□□□□ 0.13
CLN3-217ENST00000565354 CCDC167Q9P0B6 97 aa15.84■□□□□ 0.13
CLN3-217ENST00000565354 NTMQ9P121 344 aa15.84■□□□□ 0.13
CLN3-217ENST00000565354 BTNL2Q9UIR0 455 aa15.84■□□□□ 0.13
CLN3-217ENST00000565354 CBLCQ9ULV8 474 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms