RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 CHRNEQ04844 493 aa13.27□□□□□ -0.29
COMMD4-205ENST00000562310 EIPR1Q53HC9 387 aa13.27□□□□□ -0.29
COMMD4-205ENST00000562310 CMPK2Q5EBM0 449 aa13.27□□□□□ -0.29
COMMD4-205ENST00000562310 HES3Q5TGS1 186 aa13.27□□□□□ -0.29
COMMD4-205ENST00000562310 AP1ARQ63HQ0 302 aa13.27□□□□□ -0.29
COMMD4-205ENST00000562310 PPP4R4Q6NUP7 873 aa13.27□□□□□ -0.29
COMMD4-205ENST00000562310 DHRS4L2Q6PKH6 230 aa13.27□□□□□ -0.29
COMMD4-205ENST00000562310 ZBTB49Q6ZSB9 765 aa13.27□□□□□ -0.29
COMMD4-205ENST00000562310 CACTIN-AS1Q8N1I8 211 aa13.27□□□□□ -0.29
COMMD4-205ENST00000562310 ZNF619Q8N2I2 560 aa13.27□□□□□ -0.29
COMMD4-205ENST00000562310 SMYD1Q8NB12 490 aa13.27□□□□□ -0.29
COMMD4-205ENST00000562310 C16orf52Q8NHV5 167 aa13.27□□□□□ -0.29
COMMD4-205ENST00000562310 OIT3Q8WWZ8 545 aa13.27□□□□□ -0.29
COMMD4-205ENST00000562310 MR1Q95460 341 aa13.27□□□□□ -0.29
COMMD4-205ENST00000562310 TMBIM1Q969X1 311 aa13.27□□□□□ -0.29
COMMD4-205ENST00000562310 SPSB2Q99619 263 aa13.27□□□□□ -0.29
COMMD4-205ENST00000562310 CRB3Q9BUF7 120 aa13.27□□□□□ -0.29
COMMD4-205ENST00000562310 OR8D2Q9GZM6 311 aa13.27□□□□□ -0.29
COMMD4-205ENST00000562310 EVA1AQ9H8M9 152 aa13.27□□□□□ -0.29
COMMD4-205ENST00000562310 SLC13A4Q9UKG4 626 aa13.27□□□□□ -0.29
COMMD4-205ENST00000562310 OAZ3Q9UMX2 235 aa13.27□□□□□ -0.29
COMMD4-205ENST00000562310 LRRC42Q9Y546 428 aa13.27□□□□□ -0.29
COMMD4-205ENST00000562310 PCDHGA3Q9Y5H0 932 aa13.27□□□□□ -0.29
COMMD4-205ENST00000562310 ENPP4Q9Y6X5 453 aa13.27□□□□□ -0.29
COMMD4-205ENST00000562310 DNAH14Q0VDD8 3507 aa13.27□□□□□ -0.29
COMMD4-205ENST00000562310 HRKO00198 91 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 PLD2O14939 933 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 E2F6O75461 281 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 DNAJB5O75953 348 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 DKK1O94907 266 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 RASAL1O95294 804 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 DBIP07108 87 aaKnown RBP13.26□□□□□ -0.29
COMMD4-205ENST00000562310 ZNF28P17035 718 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 ATP6V1C1P21283 382 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 RPS4Y1P22090 263 aaKnown RBP13.26□□□□□ -0.29
COMMD4-205ENST00000562310 ARHGDIAP52565 204 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 EFNA3P52797 238 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 PSMD4P55036 377 aaKnown RBP13.26□□□□□ -0.29
COMMD4-205ENST00000562310 PSG6Q00889 435 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 LARS2Q15031 903 aaKnown RBP13.26□□□□□ -0.29
COMMD4-205ENST00000562310 NCF4Q15080 339 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 DUSP7Q16829 419 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 ZNF311Q5JNZ3 666 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 TMEM164Q5U3C3 297 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 TYW3Q6IPR3 259 aaKnown RBP13.26□□□□□ -0.29
COMMD4-205ENST00000562310 FAM198BQ6UWH4 519 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 DHRS13Q6UX07 377 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 ZNF517Q6ZMY9 492 aaPredicted RBP13.26□□□□□ -0.29
COMMD4-205ENST00000562310 ANKRD37Q7Z713 158 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 LAPTM4BQ86VI4 370 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 CYP4Z1Q86W10 505 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 HIPK1Q86Z02 1210 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 ZDHHC13Q8IUH4 622 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 EPHX4Q8IUS5 362 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 KBTBD2Q8IY47 623 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 GPR32P1Q8NGA4 272 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 OR52P1PQ8NH57 321 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 OR5K1Q8NHB7 308 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 WDR36Q8NI36 951 aaKnown RBP13.26□□□□□ -0.29
COMMD4-205ENST00000562310 ZNF721Q8TF20 911 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 APOBEC4Q8WW27 367 aaKnown RBP13.26□□□□□ -0.29
COMMD4-205ENST00000562310 NR4A3Q92570 626 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 NRBF2Q96F24 287 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 RMND5BQ96G75 393 aaPredicted RBP13.26□□□□□ -0.29
COMMD4-205ENST00000562310 ZNF300Q96RE9 604 aaPredicted RBP13.26□□□□□ -0.29
COMMD4-205ENST00000562310 G6PC3Q9BUM1 346 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 B3GNT4Q9C0J1 378 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 SOX17Q9H6I2 414 aaPredicted RBP13.26□□□□□ -0.29
COMMD4-205ENST00000562310 COQ10BQ9H8M1 238 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 REEP1Q9H902 201 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 NTN4Q9HB63 628 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 KLHL28Q9NXS3 571 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 NDUFAF4Q9P032 175 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 PISDQ9UG56 409 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 C3orf18Q9UK00 162 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 ABCG2Q9UNQ0 655 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 ZNF232Q9UNY5 417 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 FAM32AQ9Y421 112 aaKnown RBP13.26□□□□□ -0.29
COMMD4-205ENST00000562310 B3GALT1Q9Y5Z6 326 aa13.26□□□□□ -0.29
COMMD4-205ENST00000562310 FRG2CA6NGY1 282 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 AGAP5A6NIR3 686 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 SAGE2PA6NJ88 616 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 A8MUA0 341 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 NME6O75414 186 aaPredicted RBP13.25□□□□□ -0.29
COMMD4-205ENST00000562310 STK17BO94768 372 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 KCNK2O95069 426 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 HPRP00739 348 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 ACADSP16219 412 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 ZNF26P17031 533 aaPredicted RBP13.25□□□□□ -0.29
COMMD4-205ENST00000562310 RHCEP18577 417 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 ITIH1P19827 911 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 CSRP1P21291 193 aaKnown RBP13.25□□□□□ -0.29
COMMD4-205ENST00000562310 FPR1P21462 350 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 DNAJA1P31689 397 aaKnown RBP13.25□□□□□ -0.29
COMMD4-205ENST00000562310 PIGAP37287 484 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 ETV5P41161 510 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 PPICP45877 212 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 AQP4P55087 323 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 TAF11Q15544 211 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 ZSWIM7Q19AV6 140 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms