RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 REV3LO60673 3130 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 A0A087WUU8 490 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 A0A0J9YY10 115 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 TMEM129A0AVI4 362 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 FUOMA2VDF0 154 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 AGAP5A6NIR3 686 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 FAM170BA6NMN3 283 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 WASHC1A8K0Z3 465 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 PRAMEF26H0Y7S4 382 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 MYL12BO14950 172 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 DSCR3O14972 297 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 PRODHO43272 600 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 CTSVO60911 334 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 CSO75390 466 aaKnown RBP7.57□□□□□ -1.2
SMAD3-212ENST00000559937 UBXN7O94888 489 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 RASGRP1O95267 797 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 SOX14O95416 240 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 STATHP02808 62 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 ATP1B1P05026 303 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 C8orf89P0DMQ9 161 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 ALPPL2P10696 532 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 CPMP14384 443 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 PORP16435 677 aaPredicted RBP7.57□□□□□ -1.2
SMAD3-212ENST00000559937 ALOX12P18054 663 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 GABRG2P18507 467 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 TNNI3P19429 210 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 RPS4Y1P22090 263 aaKnown RBP7.57□□□□□ -1.2
SMAD3-212ENST00000559937 FPR3P25089 353 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 ACSL1P33121 698 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 S100A5P33763 92 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 GRK5P34947 590 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 TPMTP51580 245 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 RGS8P57771 180 aaPredicted RBP7.57□□□□□ -1.2
SMAD3-212ENST00000559937 TAS2R41P59536 307 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 COPZ1P61923 177 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 UBE2IP63279 158 aaKnown RBP7.57□□□□□ -1.2
SMAD3-212ENST00000559937 CHRNEQ04844 493 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 RAB40BQ12829 278 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 DUSP8Q13202 625 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 RUNX2Q13950 521 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 GPR18Q14330 331 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 LARS2Q15031 903 aaKnown RBP7.57□□□□□ -1.2
SMAD3-212ENST00000559937 SPHARQ15513 63 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 MED22Q15528 200 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 SSX1Q16384 188 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 TSTQ16762 297 aaKnown RBP7.57□□□□□ -1.2
SMAD3-212ENST00000559937 ZNF750Q32MQ0 723 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 MINDY4Q4G0A6 757 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 SYT14P1Q58G82 188 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 TPRG1LQ5T0D9 272 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 SLC27A4Q6P1M0 643 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 RRM2BQ7LG56 351 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 ZBTB46Q86UZ6 589 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 PEX5LQ8IYB4 626 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 CYP4Z2PQ8N1L4 340 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 OR7G2Q8NG99 324 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 BAHD1Q8TBE0 780 aaPredicted RBP7.57□□□□□ -1.2
SMAD3-212ENST00000559937 OSTF1Q92882 214 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 TSACCQ96A04 125 aaPredicted RBP7.57□□□□□ -1.2
SMAD3-212ENST00000559937 RERGQ96A58 199 aaPredicted RBP7.57□□□□□ -1.2
SMAD3-212ENST00000559937 MSLNLQ96KJ4 702 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 SLC38A2Q96QD8 506 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 OR5M11Q96RB7 305 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 STACQ99469 402 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 CDADC1Q9BWV3 514 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 TEX12Q9BXU0 123 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 SAP130Q9H0E3 1048 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 OR51E2Q9H255 320 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 PIGUQ9H490 435 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 SP140LQ9H930 580 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 IL21RQ9HBE5 538 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 ZBTB20Q9HC78 741 aaPredicted RBP7.57□□□□□ -1.2
SMAD3-212ENST00000559937 HHATLQ9HCP6 504 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 DUSP22Q9NRW4 184 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 RHBDL2Q9NX52 303 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 CRNNQ9UBG3 495 aaPredicted RBP7.57□□□□□ -1.2
SMAD3-212ENST00000559937 FBXL21Q9UKT6 434 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 SLC6A14Q9UN76 642 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 ZNF443Q9Y2A4 671 aaPredicted RBP7.57□□□□□ -1.2
SMAD3-212ENST00000559937 EXOSC1Q9Y3B2 195 aaKnown RBP7.57□□□□□ -1.2
SMAD3-212ENST00000559937 WDR45Q9Y484 360 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 F5P12259 2224 aa7.57□□□□□ -1.2
SMAD3-212ENST00000559937 MN1Q10571 1320 aaPredicted RBP7.56□□□□□ -1.2
SMAD3-212ENST00000559937 SCN2AQ99250 2005 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 OR6C74A6NCV1 312 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 KDM4EB2RXH2 506 aaPredicted RBP7.56□□□□□ -1.2
SMAD3-212ENST00000559937 LOC110117498-PIK3R3F6TDL0 507 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 STK25O00506 426 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 ARHGAP33O14559 1287 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 P2RX6O15547 441 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 KLF4O43474 513 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 KIAA0513O60268 411 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 PLOD3O60568 738 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 FMO6PO60774 539 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 UPK1BO75841 260 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 SNX4O95219 450 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 MED26O95402 600 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 SEMA4FO95754 770 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 DBIP07108 87 aaKnown RBP7.56□□□□□ -1.2
SMAD3-212ENST00000559937 HNRNPCP07910 306 aaKnown RBP eCLIP7.56□□□□□ -1.27e-8■□□□□ 10.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms