RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 DHTKD1Q96HY7 919 aaPredicted RBP3.84□□□□□ -1.79
PRPF39-212ENST00000557477 CDHR1Q96JP9 859 aa3.84□□□□□ -1.79
PRPF39-212ENST00000557477 C18orf12Q96KH6 178 aa3.84□□□□□ -1.79
PRPF39-212ENST00000557477 RPGRIP1Q96KN7 1286 aa3.84□□□□□ -1.79
PRPF39-212ENST00000557477 RUNDC3BQ96NL0 473 aa3.84□□□□□ -1.79
PRPF39-212ENST00000557477 LGMNQ99538 433 aa3.84□□□□□ -1.79
PRPF39-212ENST00000557477 LRRCC1Q9C099 1032 aa3.84□□□□□ -1.79
PRPF39-212ENST00000557477 SIRPDQ9H106 197 aa3.84□□□□□ -1.79
PRPF39-212ENST00000557477 TRPV6Q9H1D0 765 aa3.84□□□□□ -1.79
PRPF39-212ENST00000557477 PARLQ9H300 379 aa3.84□□□□□ -1.79
PRPF39-212ENST00000557477 HOMER3Q9NSC5 361 aa3.84□□□□□ -1.79
PRPF39-212ENST00000557477 UBAP1Q9NZ09 502 aa3.84□□□□□ -1.79
PRPF39-212ENST00000557477 NUDT4Q9NZJ9 180 aa3.84□□□□□ -1.79
PRPF39-212ENST00000557477 SPASTQ9UBP0 616 aa3.84□□□□□ -1.79
PRPF39-212ENST00000557477 KCNN3Q9UGI6 736 aa3.84□□□□□ -1.79
PRPF39-212ENST00000557477 MRPS2Q9Y399 296 aaKnown RBP3.84□□□□□ -1.79
PRPF39-212ENST00000557477 SZT2Q5T011 3432 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 RNF103-CHMP3A0A140T963 221 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 A0A1B0GUA9 196 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 IQCMA0A1B0GVH7 501 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 TMEM89A2RUT3 159 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 CFAP73A6NFT4 308 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 PDLIM1O00151 329 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 TFECO14948 347 aaPredicted RBP3.83□□□□□ -1.8
PRPF39-212ENST00000557477 IDH3BO43837 385 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 KIAA0513O60268 411 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 SNAP91O60641 907 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 OR6A2O95222 327 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 CXCL10P02778 98 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 FHP07954 510 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 SERPINF2P08697 491 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 UGT1A4P22310 534 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 FCARP24071 287 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 ACP1P24666 158 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 CCNCP24863 283 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 FCGR2BP31994 310 aaPredicted RBP3.83□□□□□ -1.8
PRPF39-212ENST00000557477 FCGR2CP31995 323 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 MTIF2P46199 727 aaKnown RBP3.83□□□□□ -1.8
PRPF39-212ENST00000557477 ZFP36L2P47974 494 aaKnown RBP3.83□□□□□ -1.8
PRPF39-212ENST00000557477 CRYBA2P53672 197 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 NLRP11P59045 1033 aaKnown RBP3.83□□□□□ -1.8
PRPF39-212ENST00000557477 ERVK-16P61578 105 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 RPS27AP62979 156 aaKnown RBP3.83□□□□□ -1.8
PRPF39-212ENST00000557477 TPM4P67936 248 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 CCZ1BP86790 482 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 CCZ1P86791 482 aaPredicted RBP3.83□□□□□ -1.8
PRPF39-212ENST00000557477 RIGQ13278 110 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 NFATC2Q13469 925 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 CLPPQ16740 277 aaPredicted RBP3.83□□□□□ -1.8
PRPF39-212ENST00000557477 LRRC26Q2I0M4 334 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 TAF1BQ53T94 588 aaPredicted RBP3.83□□□□□ -1.8
PRPF39-212ENST00000557477 CMPK2Q5EBM0 449 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 MFSD14CQ5VZR4 134 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 RTL6Q6ICC9 239 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 OR6B2Q6IFH4 312 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 KRTAP5-11Q6L8G4 156 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 CDC42EP5Q6NZY7 148 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 ZNF497Q6ZNH5 498 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 BNIPLQ7Z465 357 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 CARM1Q86X55 608 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 ERC1Q8IUD2 1116 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 Q8NBF4 154 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.83□□□□□ -1.8
PRPF39-212ENST00000557477 TMEM186Q96B77 213 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 TAAR6Q96RI8 345 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 CDX2Q99626 313 aaPredicted RBP3.83□□□□□ -1.8
PRPF39-212ENST00000557477 MCRIP2Q9BUT9 160 aaKnown RBP3.83□□□□□ -1.8
PRPF39-212ENST00000557477 KRTAP2-2Q9BYT5 123 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 PUS3Q9BZE2 481 aaKnown RBP3.83□□□□□ -1.8
PRPF39-212ENST00000557477 SLC7A5P2Q9GIP4 190 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 FAM107BQ9H098 131 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 PRO3102Q9H379 93 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 TSPY26PQ9H489 355 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 TMEM165Q9HC07 324 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 GDF3Q9NR23 364 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 ZDHHC18Q9NUE0 388 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 DCAF16Q9NXF7 216 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 PCSK1NQ9UHG2 260 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 CFAP45Q9UL16 551 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 PIN4Q9Y237 131 aaKnown RBP3.83□□□□□ -1.8
PRPF39-212ENST00000557477 V9GYY5 206 aaPredicted RBP3.83□□□□□ -1.8
PRPF39-212ENST00000557477 A0A1B0GUL6 1792 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 DOCK2Q92608 1830 aa3.83□□□□□ -1.8
PRPF39-212ENST00000557477 ARHGAP42A6NI28 874 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 GOLGA6L10A6NI86 522 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 YJEFN3A6XGL0 299 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 ZNF724A8MTY0 619 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 KPNA7A9QM74 516 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 SOCS3O14543 225 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 STAM2O75886 525 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 PGK2P07205 417 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 RPSAP08865 295 aaKnown RBP3.82□□□□□ -1.8
PRPF39-212ENST00000557477 ADORA3P0DMS8 318 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 CCDC192P0DO97 292 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 ETS1P14921 441 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 AKT2P31751 481 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 GCKP35557 465 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 BTDP43251 543 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 RANBP1P43487 201 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 CCNHP51946 323 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms