RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 NNATQ16517 81 aa6.71□□□□□ -1.34
SCFD1-222ENST00000556768 EMC4Q5J8M3 183 aa6.71□□□□□ -1.34
SCFD1-222ENST00000556768 TIGD3Q6B0B8 471 aa6.71□□□□□ -1.34
SCFD1-222ENST00000556768 EMBQ6PCB8 327 aa6.71□□□□□ -1.34
SCFD1-222ENST00000556768 IKBIPQ70UQ0 350 aa6.71□□□□□ -1.34
SCFD1-222ENST00000556768 PRR22Q8IZ63 422 aa6.71□□□□□ -1.34
SCFD1-222ENST00000556768 FAM9CQ8IZT9 166 aa6.71□□□□□ -1.34
SCFD1-222ENST00000556768 MMP21Q8N119 569 aa6.71□□□□□ -1.34
SCFD1-222ENST00000556768 OR9A2Q8NGT5 310 aa6.71□□□□□ -1.34
SCFD1-222ENST00000556768 OMA1Q96E52 524 aa6.71□□□□□ -1.34
SCFD1-222ENST00000556768 ZNF681Q96N22 645 aa6.71□□□□□ -1.34
SCFD1-222ENST00000556768 COL21A1Q96P44 957 aa6.71□□□□□ -1.34
SCFD1-222ENST00000556768 EBPLQ9BY08 206 aa6.71□□□□□ -1.34
SCFD1-222ENST00000556768 ITPAQ9BY32 194 aa6.71□□□□□ -1.34
SCFD1-222ENST00000556768 DDX18Q9NVP1 670 aaKnown RBP6.71□□□□□ -1.34
SCFD1-222ENST00000556768 TNFRSF10DQ9UBN6 386 aa6.71□□□□□ -1.34
SCFD1-222ENST00000556768 HEY2Q9UBP5 337 aa6.71□□□□□ -1.34
SCFD1-222ENST00000556768 ZNF639Q9UID6 485 aa6.71□□□□□ -1.34
SCFD1-222ENST00000556768 ADAM30Q9UKF2 790 aa6.71□□□□□ -1.34
SCFD1-222ENST00000556768 CNOT11Q9UKZ1 510 aaKnown RBP6.71□□□□□ -1.34
SCFD1-222ENST00000556768 EMCNQ9ULC0 261 aa6.71□□□□□ -1.34
SCFD1-222ENST00000556768 CSMD2Q7Z408 3487 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 TRBV23-1A0A0A0MS06 115 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 TRAV20A0A0B4J274 112 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 FAM90A27PA6NNH2 459 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 HSPB2A8KAH6 182 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 UBFD1O14562 309 aaKnown RBP6.7□□□□□ -1.34
SCFD1-222ENST00000556768 AZIN1O14977 448 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 EIF4EBP3O60516 100 aaPredicted RBP6.7□□□□□ -1.34
SCFD1-222ENST00000556768 ICOSLGO75144 302 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 ERN1O75460 977 aaKnown RBP6.7□□□□□ -1.34
SCFD1-222ENST00000556768 LRATO95237 230 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 CBX7O95931 251 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 HPNP05981 417 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 NEFHP12036 1026 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 CAPN3P20807 821 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 PEX19P40855 299 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 EMDP50402 254 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 HTR6P50406 440 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 NUP107P57740 925 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 RAE1P78406 368 aaKnown RBP6.7□□□□□ -1.34
SCFD1-222ENST00000556768 SLC18A2Q05940 514 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 MGAT2Q10469 447 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 RCAN2Q14206 197 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 HSPB2Q16082 182 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 VPS26BQ4G0F5 336 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 ZNF628Q5EBL2 1059 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 C1orf185Q5T7R7 199 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 NOXRED1Q6NXP6 359 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 TMEM81Q6P7N7 255 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 AAGABQ6PD74 315 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 ENPP6Q6UWR7 440 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 ANGPTL8Q6UXH0 198 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 MEX3BQ6ZN04 569 aaKnown RBP6.7□□□□□ -1.34
SCFD1-222ENST00000556768 SH2D5Q6ZV89 423 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 NCCRP1Q6ZVX7 275 aaPredicted RBP6.7□□□□□ -1.34
SCFD1-222ENST00000556768 CCDC71Q8IV32 467 aaPredicted RBP6.7□□□□□ -1.34
SCFD1-222ENST00000556768 C10orf107Q8IVU9 208 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 WDR75Q8IWA0 830 aaKnown RBP6.7□□□□□ -1.34
SCFD1-222ENST00000556768 KAT2AQ92830 837 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 TMBIM1Q969X1 311 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 TMEM41AQ96HV5 264 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 ADOQ96SZ5 270 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 CCT7Q99832 543 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 OSBPL11Q9BXB4 747 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 C3orf14Q9HBI5 128 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 SDHAF3Q9NRP4 125 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 C1orf109Q9NX04 203 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 TAS2R7Q9NYW3 318 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 EXO1Q9UQ84 846 aaKnown RBP6.7□□□□□ -1.34
SCFD1-222ENST00000556768 GPR55Q9Y2T6 319 aaPredicted RBP6.7□□□□□ -1.34
SCFD1-222ENST00000556768 C15orf41Q9Y2V0 281 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 TMED5Q9Y3A6 229 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 POLR3HQ9Y535 204 aaPredicted RBP6.7□□□□□ -1.34
SCFD1-222ENST00000556768 LIPGQ9Y5X9 500 aa6.7□□□□□ -1.34
SCFD1-222ENST00000556768 CPAMD8Q8IZJ3 1885 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 A0A087WV62 115 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 LRRC3CA6NJW4 275 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 TMEM114B3SHH9 223 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 DVL2O14641 736 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 GNB5O14775 395 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 TO15178 435 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 SLU7O95391 586 aaKnown RBP6.69□□□□□ -1.34
SCFD1-222ENST00000556768 ACTL6AO96019 429 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 JUNP05412 331 aaKnown RBP6.69□□□□□ -1.34
SCFD1-222ENST00000556768 NUDT17P0C025 328 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 GLI4P10075 376 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 PRF1P14222 555 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 GNALP38405 381 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 CDK9P50750 372 aaKnown RBP6.69□□□□□ -1.34
SCFD1-222ENST00000556768 PNLIPRP2P54317 469 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 FOXA1P55317 472 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 POU4F3Q15319 338 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 LTB4RQ15722 352 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 DECR1Q16698 335 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 SLC25A35Q3KQZ1 300 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 CYP27C1Q4G0S4 372 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 SH2D4BQ5SQS7 431 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 CES4AQ5XG92 561 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 BICRALQ6AI39 1079 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms